KEGG   Rhopalosiphum maidis (corn leaf aphid): 113553618
Entry
113553618         CDS       T06065                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03030  DNA replication
rmd03410  Base excision repair
rmd03420  Nucleotide excision repair
rmd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113553618
   03410 Base excision repair
    113553618
   03420 Nucleotide excision repair
    113553618
   03430 Mismatch repair
    113553618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rmd03032]
    113553618
   03036 Chromosome and associated proteins [BR:rmd03036]
    113553618
   03400 DNA repair and recombination proteins [BR:rmd03400]
    113553618
DNA replication proteins [BR:rmd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    113553618
  DNA Replication Termination Factors
   ELG1-RFC complex
    113553618
Chromosome and associated proteins [BR:rmd03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    113553618
DNA repair and recombination proteins [BR:rmd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     113553618
  Check point factors
   HRAD17(Rad24)-RFC complex
    113553618
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 Gp44_lid AAA_16 AAA_11 Rad17 AAA_30 RuvB_N AAA_19 AAA_24 Mg_chelatase AAA_22 AAA_assoc_2 AAA_7 ResIII DNAX_ATPase_lid DUF815 AAA_5 SLFN-g3_helicase bpMoxR nSTAND3
Other DBs
NCBI-GeneID: 113553618
NCBI-ProteinID: XP_026812826
LinkDB
Position
2:75978798..75981011
AA seq 359 aa
MDSFLKTGKINQDQQSTSSGLKSKDGSRGISDSTTPWVEKYRPRTVDEVSEQSEIVAVLK
QCLEQGADMPHLLFYGPPGTGKTSTIIAAARQLFGDMYKNRMLELNASDDRGIQVIRDKV
KTFAQLTASDRRPDGKPCPPFKIVVLDEADSMTAAAQAALRRTIERETKTTRFCLICNYV
SCIIDPLTSRCSKFRFKPLSHDIMLARLEHICKEEGVKCAPRVLARLVDASGGDMRRAIT
SLQSTARLKGEDGIEEVDVLEVVGTVPDVWLDRMIDIGRMNDYQKMDGFVEDLIFEAYSA
AQILEQLHDKIVFSTDLKDQQKALICKSISICAYRLQEGCSEYVTLLHLLCSVAKALKG
NT seq 1080 nt   +upstreamnt  +downstreamnt
atggattcttttctaaaaactggaaaaatcaatcaagatcaacaatctactagcagtggt
ctgaagagtaaagatggatcacgaggaatttctgacagtaccacaccttgggtggaaaaa
tatcgacctcgtacagtcgatgaggtatctgaacagtcggagattgtagctgtactaaaa
caatgtttagaacaaggtgctgatatgccacacttattgttttatggcccacctggtaca
ggtaaaactagtaccataattgcagcagcacgccagttgtttggagatatgtacaaaaac
cgtatgctagaacttaatgcatctgacgatcgtggtattcaagtgattcgtgataaagtt
aaaacatttgcacagcttacagcttctgaccgacgacctgatggtaaaccttgcccaccg
ttcaaaattgttgtattagatgaagctgattcaatgacagcagctgctcaagcagctctc
agacgtaccattgaacgagagactaagactactagattctgccttatttgtaattatgtg
agttgcattattgatccattaacgtcacgttgctccaaattcagatttaaacctttatca
catgacataatgctagctcgtcttgaacacatatgtaaagaagaaggagtaaaatgtgca
ccacgggtactggcccgattggttgatgcttctggtggagatatgcgtagggcaatcaca
tcactccaaagcacagctagattaaaaggtgaagatggtattgaagaagtagatgtttta
gaagttgttggcactgttccagatgtttggttagatcgtatgatagatataggtcgtatg
aatgattatcaaaaaatggatggttttgtagaagatctgatatttgaagcctattcagca
gctcagattttagaacaattgcatgataaaatagtgttttctacagatttaaaagaccaa
cagaaggctctaatttgtaaatctatcagtatttgtgcctatagattacaagaaggctgt
agtgaatatgtcactcttttacatttattatgttcagttgctaaagcattaaaaggttaa

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