Rhopalosiphum maidis (corn leaf aphid): 113553690
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Entry
113553690 CDS
T06065
Name
(RefSeq) nuclear pore complex protein Nup155-like isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113553690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113553690
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113553690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Nicastrin
PQQ_3
TPR_16
Motif
Other DBs
NCBI-GeneID:
113553690
NCBI-ProteinID:
XP_026812960
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All DBs
Position
2:complement(19256012..19271226)
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AA seq
1338 aa
AA seq
DB search
MDSSMNISRFMDNSMSMINQSISAKDSLDLSGKMLDKFFAADDSFPTLVEKMQITKSSQS
VSGCTEYDYPKEGLGMPSIAPLKSKHKIPLPGALLEQWNDAQNFHRKLGIFPSINRVWVT
IDQEFFLWDYREGTDLSYFDGMNSTIFAVALVKPKANVFQAHIKNLLVLATGLNIAILGV
TFNQVTSVDGKSIKQLELTTDTIYEVPTEGVITSKIVGTDNGRIFLGSEDGNLFEIDYWK
DLGWFSIGNGRRCKKVCHSVGTLSYILPSFLTYAITEPSAIIEIAVDNTRHILYTLTENS
SIEMYDLGSDGKSTSRIVSLSHSNLEYQVSKLLRTMEIAQITILSSIKIIEETESPNIHL
MVVSKSGFRLYFSTGAITSSNTRPYTLQLVHIRLPPGYNRVIGESKPSCVQQVLYNRGTI
IMSCNTDITNYRPMLWCISSDEYAFSSNFSERYFITDLDVCPLALDNIGPNLLIYNDPSL
PQPPLIVRQQFESRQEYIILAPQGLEIFEMLQPYDTLCELLASSQGSETDAIKTYFKNFT
DIQACVACLTIICDTSLKNLKIKEYATRAFFTHGGEPKLVTENLQESFHELTRVSQNNSF
GSSNFSTSPIPPSSMPTFIKNQTNISHLPFESTSVQYSSKHNGLYLFVSRLLRPLWNIKA
VNMETTDGKTYTANIVSPDDCSFIANHLQTLHSFINNHSKMLANYSRIPLDTSRRTAIQD
AHQSESKSIECLKQLVVFSAEVFNLWKLLSEHQFHIIAKELIDHEQRVLENITFKELILS
HQELCQTLVQKLLDTYLNENSSVESISTKLRQVCPSIYHSEDAACAKASEMIKLAQSTVN
EDVRKRILYKSLMVLKEVAPKFNLTSVCLQYTNCAYMEGVYQMCREYAKKIDPKNLGGHY
FVNNMVSNRDGPGYGAYMLRLDIYKEINASLDYLYSIMVKNPSVIIPSRPNLIPGILENS
ALTSEQSSNLISELIKLCISCDDEIMHTVVYGWLIDKKLIKETIEMGHHSLEKFLLAQSR
CNDNNNYIKDVLCRYYEYNGNYNEAAEVLASLAKRPESGLTLSDRLMYLGRAMACLRSKK
LSTPTLNVTSLRDVEDLLQVAEIQKMILDLLLSSQIDGKSDIIDKLNSCLFTLGELYSNF
AEPHSLWEVQLAILQLSNHDDRELVNQIWENILLKVVEDCGDIDEHNKMTIALEKIKSLA
NSHPINSSTFDLKYITTMLEYLNCNLGGDLESVYTTMLTIGAPIESLVTIYKKIYSTNDP
RWQKTSELHVLEVIMSLARYYLQNVDLWPSGMQRRSIAVNLFDLLVICQNMLYSRFAHSP
LIEGVIAIKTELDNIIKN
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcaatgaatatttcaagattcatggacaactctatgtccatgattaatcaa
tcaatatcagccaaagatagtttagatctatctggtaaaatgttggataaattttttgca
gcagatgactcatttcctacacttgttgagaaaatgcaaataactaaaagcagtcaaagt
gttagtggttgcacagaatatgactatcctaaagaaggtctagggatgccttcaattgct
cctcttaaatcaaaacacaagatacccttaccaggcgcattactagagcaatggaatgat
gcacaaaactttcatcgcaagttaggaatatttcctagtatcaaccgagtttgggtcaca
attgatcaagaatttttcttatgggactatagagaaggaacggatttatcttattttgat
ggaatgaactcaactatttttgcagtagcattagtaaaacctaaagcaaatgtatttcaa
gctcatattaagaatttattagtcttagctactggattaaacattgcaatattaggagta
acatttaaccaagttaccagtgttgatggtaaaagtataaaacaattggaacttactaca
gatactatttatgaagttcctactgaaggtgtgataacttctaaaattgtcggaactgac
aatggacgaatttttcttggaagtgaagatggtaacctatttgaaattgattattggaaa
gatttgggatggttttcaattggaaatggaagacgttgtaagaaagtttgtcattcagtt
ggaactttatcgtatattctaccatcatttttaacatatgcaatcaccgaaccctctgcc
attattgaaatagctgttgataatacacgtcacatactttacacactgactgaaaatagt
tcaattgaaatgtatgatcttggatctgatggtaaatctacaagccgaattgtttctttg
tcacattctaatcttgagtatcaagtttcaaaattacttagaactatggaaatagctcaa
ataactatattgagtagtataaaaattatagaagaaactgaatcacctaacattcatctg
atggttgtatccaaatctgggtttagattgtatttttctactggagctataacctctagc
aatactagaccttacacattacaacttgtacacatacgtttaccaccaggatataatagg
gttattggagaatctaaacctagttgtgtacagcaagtgttatataatagaggtactatt
ataatgtcatgtaacactgacataactaattataggccaatgttgtggtgtatatcatct
gatgaatatgcatttagttctaattttagtgaaagatattttattactgatttggatgta
tgtccattagcactggacaatataggacctaatttattgatatacaatgatccaagttta
ccacaaccaccactcattgttcgtcaacagtttgaaagtcgccaagaatatataatcttg
gctccacaaggtttggaaatatttgaaatgcttcaaccttatgacactctctgtgaatta
ttagccagcagtcaaggttcagaaacagatgctatcaaaacatattttaaaaatttcaca
gatattcaagcatgtgtggcatgtctcacaattatttgtgatacgtcattgaaaaattta
aagattaaagaatacgcaactcgtgcatttttcactcatggtggtgagcccaaattagtg
actgaaaatctgcaggaatcatttcatgaattaacaagagtttcacagaataatagtttt
ggttcaagtaatttttcaacatcacctatacccccatcatctatgccaacatttataaaa
aatcagacaaatatatcacatttaccatttgaatccactagtgttcagtactcatcgaaa
cataatggattatatttatttgtgagtcgcttactgagaccgctttggaacattaaagct
gttaatatggagactactgatgggaaaacttatactgccaacatagtgtccccagacgat
tgttcatttattgcaaaccatttgcaaactttacactcttttataaacaatcattcaaaa
atgttagcaaactattctagaataccattagatacatctagacgaacagctatacaagat
gcacatcaatctgaatcaaaatctattgaatgtttgaaacaattagttgtttttagtgct
gaagtatttaatttgtggaaattactcagtgaacatcaatttcatatcatagcgaaggaa
ttaattgatcatgaacagcgtgtattggaaaatattaccttcaaagaattgatcctttca
caccaagaactgtgtcaaactttggttcaaaaactattagatacgtacctaaatgaaaat
tcgtctgtagaatcaattagtacaaaattacgacaagtctgtccatccatataccattct
gaagacgctgcttgtgcaaaagcatcagaaatgattaaattagcacaatctacagttaat
gaggatgtgcgtaaacgaattctatacaaatctcttatggtattgaaagaagtagcacct
aagtttaatttaacttcagtttgtttacaatatacgaattgtgcatacatggaaggtgta
tatcagatgtgtagagagtatgctaaaaaaattgatccaaagaatttgggtggtcattat
tttgtcaacaatatggtatcaaatagagatggaccaggctatggtgcctatatgctcaga
ttagatatttacaaagaaataaatgcaagtttagattacttatactctatcatggtgaaa
aatccatctgtaattatccctagtcgaccaaatttaatacctggaattctagaaaattct
gcactaacttctgaacaatcttctaatttgatttctgaattgataaagttgtgtatctca
tgtgatgatgaaatcatgcacaccgtagtatatggatggttgatagataaaaaattaata
aaagaaacaattgaaatgggacatcatagcttggaaaaatttttattggctcagtccagg
tgtaatgataacaataactatattaaagatgtactatgtagatattatgagtataatgga
aattataatgaggcagctgaagttttggcatcattggctaaaagaccagagagtggttta
actttaagcgatcgccttatgtatttgggacgggcaatggcatgtttgcgcagtaaaaag
ttgagtacacccacattaaatgttaccagtctcagagatgttgaagacttgttacaagta
gctgaaatacagaaaatgatattggatttattgttgtctagtcaaattgatggaaaatct
gatataattgataagctaaatagctgtctgtttacattaggcgaactttatagtaatttt
gctgaaccgcatagtctatgggaagttcagttggcgatattacagctttcaaatcatgat
gatcgtgaactagtcaaccaaatttgggaaaatattttattaaaagttgtggaagattgt
ggagatattgacgaacacaacaaaatgactattgctctggaaaaaataaagtcattggcc
aattcacatccaatcaattcatctacttttgatttgaagtatataacaacaatgttggaa
tatttgaattgtaacttgggtggagatttggaatctgtgtacacaactatgttaactatt
ggtgctcctattgaatctttagtaacaatatataaaaagatttattctactaatgatcca
cggtggcaaaagacaagtgagttgcacgtattagaagttattatgagtttggctcggtat
tatttacaaaatgttgatttatggccatcaggaatgcaaaggagatccattgctgtgaac
ttattcgatttattagtgatttgtcaaaacatgctgtatagccgttttgcacatagtcca
ctgattgaaggtgtcattgcaatcaaaactgaacttgacaatatcattaaaaactga
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