Rhopalosiphum maidis (corn leaf aphid): 113553708
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Entry
113553708 CDS
T06065
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113553708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmd03021
]
113553708
03036 Chromosome and associated proteins [BR:
rmd03036
]
113553708
Transcription machinery [BR:
rmd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113553708
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113553708
PBAF complex
113553708
GBAF(ncBAF) complex
113553708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
113553708
NCBI-ProteinID:
XP_026812991
LinkDB
All DBs
Position
2:86260612..86269927
Genome browser
AA seq
967 aa
AA seq
DB search
MLALGPKKDGSPNVKFFESPETLNMLEGVRTWLMKNHKKYLQADPPTNKTLAALVLQLIQ
FQEDNLGKNVSKPPLTRLPMRCFMDFKPGGALCHLLATVYKFKVEQGWRRFDFQVSKSPS
RMDRSIEMFMNVEKALIHAKCLSMPVILIHPDVDKIVQNRIKDIIKRHQGTLTENEQEAT
HVLFPVVDPLDEEYARPVYKNKERWIQMHWYYFPDSHDSWVTTELPVEPPEVLYGNQHPT
PWRVTASWVLDLDTYNEWMNEEDYEVDETGKKKVHKLRLSVEDFMSNDPSGGKKKPKRKR
TPSPPSKPNKRKSGRGGSVMSVKKNKVDDDSDDLTRDLEDPISEPNISEVNLNISQIKTG
SSSSKKDSDSQPIRSGTLMDLDEDLDKSEDNKNYDNNAQDGTSCPASGVSSTGGALSIIK
EEGPEDNATEQMHHIVIPSYAAWFDYNSIHTVEKRALPEFFNNKNKSKTPEIYLAYRNFM
IDTYRLNPTEYMTSTAARRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTAMGPPPTS
HFHILSDTPSGLQPVNPPRTQQPSAAKTLLDLEKKPVTADKDTGHHPEPLSSFGLKLDQY
AKKPGLLRNKTAAGMTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILHFLRL
PIEDPYLEDFETGGALGPLSYQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEF
AAIRDEVPSALMDAHVKNIEAATTDGKYDPAVGLLQSGIAGTFPEKEEENDKEKKEPEDV
KDPSLTTENDKSVRADKEVISDKDKEQPMDVDKKPCEETTASTQSTTVNRTAEEEPERIV
KDSEVQAAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTM
EREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHHRLQAAGVPPPVSNPEHVAPAS
PAPPMAT
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgttggccttgggtccgaaaaaggacggcagtccgaacgtgaagttttttgaatctccc
gaaacgctgaacatgttggagggcgttaggacgtggctaatgaaaaatcacaaaaagtac
cttcaagcagatccaccaaccaacaagactcttgcagctctggtgttgcagctcattcaa
tttcaagaagacaatcttggcaaaaatgtcagcaaaccaccactcactcgcttgcctatg
cgctgttttatggatttcaaacctggaggtgctctgtgccatttgctagctaccgtgtac
aagtttaaagtggaacaggggtggcgaagattcgatttccaggtcagtaagagtccttct
agaatggacagaagtattgaaatgtttatgaacgttgaaaaggctctaatccatgccaaa
tgtctatctatgccagttatacttattcatccagatgttgataaaatagttcaaaaccgc
ataaaggatattattaaaaggcatcaaggaacacttactgaaaatgaacaagaagctact
catgtcttatttccggttgtggatccattggatgaagaatatgctcgccctgtttacaaa
aataaagaacgttggatacaaatgcattggtattattttcctgattctcatgattcatgg
gtgactactgaattgcctgttgaaccacctgaagtattatatggcaatcaacatccaact
ccatggagggtcacagcgtcttgggtcttagatttagatacttataatgagtggatgaat
gaagaagattatgaagttgatgaaactggcaaaaaaaaagttcataaattacgtctctca
gttgaagatttcatgagtaatgatccatctggaggtaagaaaaaacctaaacgaaagcga
acgccatcgccaccttcaaaaccaaataaacgtaaaagtggacgtggaggttctgtgatg
agtgtaaagaaaaataaagtagatgatgatagtgatgatctaactagagatcttgaagat
ccgatttcagaacccaatatttctgaagttaatttaaatatttctcaaataaaaactgga
tcgtcttcatcaaagaaggatagtgattctcagccaattagaagtggtactcttatggat
ttagatgaagatttggataaaagtgaagataataaaaactatgataataacgcacaagat
ggtacaagttgtcctgcatcgggagtgtctagtactggaggtgctttatcaataattaaa
gaagaaggaccagaagataatgccactgaacaaatgcatcatattgttataccaagttat
gctgcatggtttgattataattcaattcatacggttgagaaacgtgccttaccagagttt
ttcaataacaagaataaatcgaaaacacctgaaatatacttagcgtatcgaaatttcatg
attgatacgtatagacttaatccaactgaatatatgacaagtactgctgctaggcgtaat
ttggctggtgatgtttgtgcaattatgagagttcatgcttttttggaacaatggggtctt
attaactatcaagttgatgctgatagtagaccaactgcgatgggtccaccacctacatct
cattttcatatcttatctgatacaccctctggtttgcaacctgttaatcctcctagaacc
caacaaccttcagctgctaaaacacttttagatttagagaaaaagcccgtaacagcagat
aaagatactggtcatcatccagaaccattatctagttttggacttaaattagatcaatat
gctaaaaaacctggtttattacgaaataagacagctgctggaatgacaagagattggact
gaacaagaaactttattattactcgaaggattagaaatgtataaagatgactggaacaaa
gtttgtgaacatgttggcacaagaactcaagatgaatgtatattacactttcttcgttta
ccgatagaagatccctacttagaagattttgaaactggtggtgctttgggtcctttatct
taccaacccattccatttagtaaatctggtaatccaattatgtctactgttgcctttttg
gcatctgtagtggaccccagagttgctgctgcagcagctaaagctgctatggaagaattt
gctgcaattcgagatgaagttccttctgcgttgatggatgctcatgttaaaaacattgaa
gcagccactacagatggaaaatatgatccagctgttggacttttacagagtggtattgcg
ggaactttcccagaaaaagaagaagaaaatgataaagaaaagaaagaaccggaagatgtc
aaagatccatcattgacaacagaaaacgataaatccgtcagagctgataaagaagtaatc
tctgacaaagataaagagcaacctatggatgttgataagaaaccttgtgaagaaactaca
gccagtacacagtctactactgttaatcgtactgctgaagaagaacctgaacgaatagtt
aaagactctgaagtacaagctgctgctgctgcagctttagccgcagctgctgtcaaagca
aaacatttagcagctgtagaagaacgaaaaataaaatctcttgttgcattactagtagaa
acacaaatgaaaaaactagagataaagttaagacactttgaggaattagaaacaactatg
gaaagggaacgcgaagggttagaataccaaaggcagcagttgatacaagagcgacaacaa
ttccatttagaacagctaaaagctgctgaattcagagctcgccaacaggctcatcataga
ttacaagctgctggtgttcctcctccagtttcaaatccagaacatgttgctcctgcatca
cccgcgcctccaatggccacataa
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