Rhopalosiphum maidis (corn leaf aphid): 113553827
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Entry
113553827 CDS
T06065
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48-like isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rmd01002
]
113553827
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmd04121
]
113553827
Enzymes [BR:
rmd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113553827
Peptidases and inhibitors [BR:
rmd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113553827
Ubiquitin system [BR:
rmd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113553827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
Usp-48
ubiquitin
Motif
Other DBs
NCBI-GeneID:
113553827
NCBI-ProteinID:
XP_026813170
LinkDB
All DBs
Position
2:complement(4615990..4656771)
Genome browser
AA seq
1195 aa
AA seq
DB search
MSKKKDHERKSQWAWAENIHPNNIEFDHVLKAYRIGLPNCKPLSCRRNCKNNPYCLSGLG
EQRWLQDKVRTPVNDYEDPELERRQNNKFVGLKNLGATCYINSLLQLWFHNINFRKAIFN
WKPEEDSTESQNKSLYIENSYVPETSVGHLQLVFALMQFGKQRSVDPEDFITTLRINTAL
QQDAHEFSNLFLSVLENKFSTQSDVSVRDMVRDNFLGEYKYVTTCLKCKTKSTRPSTFYE
LDLNIKGHKTLNESLQEFLKEEHLTGDDQYYCDHCNCKQDAVRKICLTTLPPVLNIQLMR
FVYDRQTMQKKKLNTYIQFSQTLDMAQYLNLPVDLDESSKEKHMYNLCAVLIHKGSSAYS
GHYVAHIKDIAAEEWYKMNDENVEKLKGKGLNLCTEDEFKLNGSKVTKAPKIQKGMLQTN
NAYMLVYMHHTMITKLKTESSNWELSPRLIHLVEARNNNFENTILNIKSNREYVEDKDKV
FVEQMLNLITEMNSVSVKEKKKEAISLQWLNYWFKITPNQNVKEISNCAILCKHNLLDPD
KVHEAKYIGTELADKLYGIYQGGPRLKLNSSLCWKCVRNKCALLYTKTLTTEQNKTINNV
LHSWNPNHNADDENQEKSYWVGKDSLKSWRRMYLELFEYFVNNHDIPPNTALPLNPDLLS
VVCDPSSSFVEDKKFFKSKDRSRFIKMEGITLESIDGCRKLAHLFVNNSISIFKILKLND
FKPFHYSLLELESVLEEMTNILSSVIAKKVNDELANEEQKYDSNKIDNSKNIAECLIQNE
NELKIDDEHKEDDVEDNSHEEKDKHDDSDSFDNKNDTEYMSWGFNEDITCSHGNLTIENN
TRRLVPEVVKGILHSYFPKAPIFANDVEPCNICLNMHNQDEITKNLHKQSAISEKELLSD
LLWNKKRPVPSQENSPYPCVSKNFLESWRKFVRNSSKEPRPQSIVNEALLCKEHTGLLFE
PPSNLYSTEQNPIALLTKEEWTILSRCYAADYGVYLYFGELGMFTTSKPEICVPCRQRRL
DEEKKEQLKYNKAKIFIKVIEKESRENRFNGIDDKDELWGNCSKKIKLDTACLNGGTSGS
TTAAAPTYVNNGTLELGIRRSARNRRPRGELIVVSSNDTLLDLKMKIMGAFNVMPNDQHL
KTAEGVRLDDNEATLADLEILPDTLILAKFDEPTEDLPEFVAEEEAGFKGTELMS
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaagaaagatcacgagagaaagagtcagtgggcatgggccgaaaacatacac
cccaacaacatcgaattcgaccatgtactcaaagcatatcgcatcgggctgcccaattgc
aaacctctgtcttgccgtcgtaattgcaaaaataatccatactgtctatctggacttggt
gaacaacgttggcttcaagataaagtgcgtacacctgttaatgactatgaagatccagag
cttgaacgacgacaaaacaataaatttgttggtttaaaaaatttgggtgcaacatgttat
atcaatagtcttttacagttatggttccataacattaacttcagaaaagctatatttaat
tggaaaccagaagaagattcaactgaaagtcaaaacaagtctctttacattgaaaattcg
tatgtaccagagactagtgttggtcatctgcaactagtgtttgctttaatgcaattcggt
aaacaacgttcagttgatcctgaagactttattacaactttaagaattaatactgctctt
caacaggatgctcatgagttttcaaatttgttcctatcagtcttagaaaacaagtttagt
acacaatccgatgtatctgtcagagatatggttagagataattttcttggtgaatataaa
tatgtaactacctgtttaaaatgtaaaactaaatccacacgtccatcaacattttatgaa
ctcgatttaaatattaaaggtcataaaacattgaatgaaagcttacaagagtttttaaaa
gaagagcatctaacaggagatgatcagtattattgtgaccattgtaactgtaaacaagat
gctgtacgaaaaatatgtttaactactttaccccctgtgctaaatattcaattaatgcgt
tttgtttatgatagacaaacaatgcaaaaaaaaaaattaaacacatatatacaattttca
caaacattagacatggctcagtatttaaatttacctgttgatcttgatgaatcatcaaaa
gaaaaacatatgtacaatttatgtgcagtccttatacacaaaggttcaagtgcatactct
ggtcattatgttgcccatattaaagacattgcggctgaagaatggtataaaatgaatgat
gaaaatgttgaaaaactaaagggtaagggtttaaatttgtgcacagaagatgaatttaaa
ttaaatggttcaaaagttactaaagctcccaagattcaaaaaggtatgttacaaacaaac
aatgcttatatgttggtttatatgcaccatactatgataacaaaactaaaaactgaatca
tctaactgggagttgtcaccaagactgattcaccttgtggaggctcgtaataataatttt
gaaaatacaatattaaatattaagagtaatcgagagtatgtagaagacaaagataaagtg
tttgttgaacaaatgttaaatttaataactgaaatgaactctgtatctgtaaaagaaaaa
aaaaaggaagccatttcattacagtggcttaactattggtttaaaatcacaccaaatcag
aatgtcaaggaaataagcaattgtgcaatattatgtaaacataatttacttgatcctgat
aaagtgcatgaagccaaatacatcggaacagaattagcagataaattgtatggtatatat
caaggtggtccaaggctaaaattaaattcatcattatgttggaaatgtgtaagaaataaa
tgtgccttattatacactaaaacattaactactgaacaaaataaaactatcaacaatgtt
ttgcatagttggaatccaaatcataatgctgatgatgaaaatcaagaaaaaagttactgg
gtaggaaaagattcattaaaaagttggcgacgaatgtacttggaattgtttgaatatttt
gttaataaccatgatatacctccaaacacagcactgcctctcaatccagatctgttgtca
gtagtatgtgatccatctagcagttttgttgaggacaaaaagtttttcaagtctaaagat
cgaagtcgttttattaaaatggaaggtataacattggaatctattgatggatgtcgcaaa
cttgctcatttgtttgttaacaattctatatcgatttttaaaattctaaaacttaatgat
ttcaaaccttttcattattccttgttggaattagaatcagtcttagaagaaatgacaaat
atattatcttcggtcattgctaaaaaagttaatgatgaattagctaatgaagagcagaaa
tatgatagtaataaaatagataattcaaagaatatagctgaatgtttaattcaaaatgaa
aatgaattaaaaatagacgacgagcacaaagaagatgatgttgaggataatagtcatgaa
gaaaaagacaagcacgatgattcagattcatttgataacaaaaatgatactgaatacatg
tcctggggattcaatgaagacattacatgttcacatggaaacttgactattgagaacaac
acaaggagattggttcctgaagtagtaaaaggtatacttcattcatattttcctaaagca
ccaatatttgctaatgatgtagaaccttgtaatatatgcctaaatatgcataatcaagat
gaaattactaaaaatttacataagcagtccgctatttcagaaaaagaattgctaagtgat
ttgctatggaataaaaaaagacctgttccttcacaagaaaattctccttacccttgtgtt
tctaaaaattttttagaatcttggagaaaatttgtgagaaattcatctaaagaaccaaga
ccgcagtcgattgtaaacgaagcacttctttgcaaagaacatactggattgttattcgaa
ccaccttcgaatttgtattcgactgaacagaatccaatagcactattaactaaagaagaa
tggacgatactttcacgatgttatgcagctgattatggagtatacttgtactttggtgaa
cttggcatgtttacaacatcgaaaccagaaatatgtgtgccgtgccgtcagagaagattg
gacgaagaaaaaaaagaacagctaaagtataataaagcaaaaatttttattaaagtgatt
gaaaaagaatcacgtgaaaatagattcaacggaatcgacgacaaggatgaattatggggc
aactgttcgaagaaaattaaactagatacggcgtgccttaacggcggtactagtggatcg
acaacggccgccgctcccacgtacgtcaacaacggcacattagagttgggaatcagaagg
agtgcacgaaaccgaagaccgaggggtgaactaatcgtggtttcttcaaacgacactttg
cttgatctcaaaatgaagatcatgggtgcattcaacgtcatgcccaatgatcagcatctg
aaaacagcagagggtgtgaggttggatgataatgaagctacattggctgacttagaaatt
cttccggatacattaattttagcaaagtttgacgaacccactgaagacctaccggaattc
gttgccgaggaagaagctggcttcaaaggtaccgagctcatgagttga
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