Rhopalosiphum maidis (corn leaf aphid): 113553883
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Entry
113553883 CDS
T06065
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 5
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd00061
Fatty acid biosynthesis
rmd00071
Fatty acid degradation
rmd01100
Metabolic pathways
rmd01212
Fatty acid metabolism
rmd04146
Peroxisome
Module
rmd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
113553883
00071 Fatty acid degradation
113553883
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
113553883
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rmd01004
]
113553883
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmd04147
]
113553883
Enzymes [BR:
rmd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
113553883
Lipid biosynthesis proteins [BR:
rmd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
113553883
Exosome [BR:
rmd04147
]
Exosomal proteins
Exosomal proteins of breast milk
113553883
Exosomal proteins of breast cancer cells
113553883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
113553883
NCBI-ProteinID:
XP_026813248
LinkDB
All DBs
Position
4:23486445..23495580
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AA seq
658 aa
AA seq
DB search
MSCYCPNWMNESPLEVPINLDHQSDLLKGPEIVHVSKFYKEGIEGKFLSNIAPDARTLYE
TFRKGAKVSNNGKCLGWRENISKPFQWIHYNETLLRARNFGSGLLGLGFPKATQIFIGIF
SQNCPEWILTEQAAYCFSMVVVPLYDTLGPEACSFVINQAEISVVVVDTDEKCNQLLDRS
PKCLRRIIVIRGTRPSTSQKAKNRGVELLTFDEVEKAGASKTFPEQPPKPTDLCTICYTS
GTTGLPKGVMLTHGNVVAAVSAILVQLSQYRPSVGDVMISYLPLAHMLERCCENGMYLVG
GSVGFYSGNIKFLFEDMKVLKPTIMPSVPRLLNRIYETEMANIVPQFFKRVMFNMALRSK
ENEIKKGIIRKNSIWDRLVFGALQRNMGGRLRLMITGSAPLAGNVLTFMRCALGCIVVEG
YGQTECTAPITLSIQGDMNTEHVGPPIACNLVKLADVPEMEYYATSNQGEICVKGSNIFQ
GYFKDPDTVTFDDHGWHHTGDIGMWLSNGTLKIIDRKRHIFKLSQGEYIVPEKIETIYHK
SQYVKQVFVHGESLKSCIIAIVVPMVDVIKSWAQENGISGTLSVLCANPEVKKLIMDDMT
AWGKDGGLKSFEQVKDVYLHPDPFSVQNGLLTPTFKMKRPQVRSYFAPQIEDMYMKLK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgttactgtccgaactggatgaacgagagcccgctggaagtgcccatcaatctc
gatcatcaatcggatctacttaagggaccagaaattgtgcacgtttcgaaattttataaa
gaaggaatagaaggaaaatttctaagcaatatagcaccagatgctaggactctgtatgaa
acgtttcggaaaggcgcaaaagtttcaaacaacgggaagtgcctaggctggcgtgaaaat
attagtaaaccatttcaatggattcattacaacgagacattacttcgcgctcgaaatttc
ggttcaggtctattaggtcttggttttccaaaagctacccagattttcatcggaatattc
agtcaaaactgtcccgaatggattttaacagaacaagcggcttattgcttttctatggtg
gttgtaccactttacgatacattgggcccagaagcttgttcattcgttataaaccaagcg
gaaatatcagtggtggtggtcgatacggacgagaaatgcaaccagttattggatagatcg
cccaaatgtcttcggcggataattgtcatccgcggtacccgaccatcaactagccagaaa
gccaagaaccgtggtgttgaattattgactttcgacgaagtggagaaagctggagcatct
aaaacgtttccagaacagcctccaaaacctactgatctgtgtacaatatgctacacttcg
ggcaccacgggattaccaaaaggagtgatgctgacccacggtaacgtcgtggcagctgtc
agtgccattctagtacaactttctcagtacaggccgagcgtgggtgacgtaatgatctcg
tacttgcctctagcacacatgttggaaaggtgttgtgaaaacggaatgtatttggtcgga
ggttcagtcggtttttacagtggaaatattaagtttctgtttgaagatatgaaggtgctg
aagccgacaatcatgcccagtgtccctcgtctgcttaacagaatctacgagacggaaatg
gcgaacattgttccgcaattttttaaacgcgtcatgttcaacatggcgctccggtcgaaa
gaaaacgaaattaaaaaaggcattatccggaaaaacagtatctgggatcgtttggtgttt
ggcgctttgcagagaaacatgggcggtcgtctgaggctgatgattacgggctcggcccca
ttggccggtaacgttttgactttcatgagatgtgcactcgggtgtatagtggtagaggga
tacggccaaacagagtgtacggcgcccataacgttgtcgatccaaggtgatatgaacacg
gagcacgtaggaccgccaatagcttgtaatttggttaagctggcagacgtaccggaaatg
gaatattacgcgacgtctaaccaaggggaaatttgcgtaaaagggtccaacatttttcaa
gggtactttaaagatccggataccgttacgtttgacgatcacggatggcatcataccgga
gacattggaatgtggctttctaatggcacacttaaaataatcgatcgcaagagacatata
tttaaactctctcaaggcgaatatattgtaccagaaaaaattgaaacaatttatcataag
agtcaatatgtaaaacaagtatttgttcacggagaatcattaaagtcgtgtatcatagcc
atagtggtccccatggtggacgtcattaaatcgtgggcacaagaaaatggcatatccggt
acgctatcagtgttgtgcgcgaaccctgaagtcaaaaagctcattatggatgacatgaca
gcgtggggaaaagatggtggtcttaagtcatttgaacaagtgaaagacgtctatctgcat
ccggatcctttttctgtgcagaatggactgttgacacctacgttcaaaatgaaacgtccg
caggttaggtcatactttgcgccgcagatcgaagacatgtatatgaaattgaaatga
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