KEGG   Rhopalosiphum maidis (corn leaf aphid): 113554008
Entry
113554008         CDS       T06065                                 
Name
(RefSeq) U6 snRNA phosphodiesterase
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rmd03041]
    113554008
Spliceosome [BR:rmd03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    113554008
SSDB
Motif
Pfam: HVSL 2_5_RNA_ligase2
Other DBs
NCBI-GeneID: 113554008
NCBI-ProteinID: XP_026813437
LinkDB
Position
2:complement(436468..438986)
AA seq 235 aa
MDLIQRYSGDSDSEHDESEQKMLPLPKAIATMFDGKLYHPKPDDKPDSHQGRTRLFEHER
GNWATYVYVPCPDMDLIEIIQEKLSECGLEIIEHPHISLTKTVVLQYHWIQRFINDIKSK
LSTILRFTVTLGNLEIFCNENCSRTFIGFLAEPAEVLSECVDQLDKVLSDYNLQKYYENP
KFHLSVAWCLGDQSSQLRTKLKSLELEIEVGTCRSLKVDKLMCKTGNKKYNFDLV
NT seq 708 nt   +upstreamnt  +downstreamnt
atggacctaatacagcggtacagcggagatagtgacagcgaacatgatgaatcggaacaa
aaaatgttgccattacccaaagctattgctacaatgtttgatggcaagctgtatcatcca
aagccagatgacaaacccgattcccaccagggacgtacccgattgtttgaacatgagcgt
ggtaattgggctacttatgtatatgtaccatgtccagatatggatttaatagaaatcatt
caagaaaaattgtccgaatgtggtctggaaattattgaacatccccatattagccttaca
aaaacagttgtactacaatatcattggatacaacgttttatcaatgatataaaatctaaa
ttgtcaacaatcctaaggtttacagttactcttggaaacttagagattttctgtaatgaa
aattgtagtagaacatttattggttttcttgcagaacctgcagaagtcttatctgaatgt
gttgatcaattagacaaagtcttgtcagattataatctacaaaaatattatgaaaatcca
aaatttcatttgagtgttgcttggtgtttgggcgatcaatctagtcaactaagaactaaa
ttaaaatcattagaattagaaatagaagttggaacttgtcgtagcttaaaagttgacaaa
ctaatgtgtaaaactggtaataaaaaatataattttgatctagtttaa

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