Rhopalosiphum maidis (corn leaf aphid): 113554187
Help
Entry
113554187 CDS
T06065
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03082
ATP-dependent chromatin remodeling
rmd03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113554187
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113554187
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rmd01009
]
113554187
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmd03021
]
113554187
03036 Chromosome and associated proteins [BR:
rmd03036
]
113554187
Protein phosphatases and associated proteins [BR:
rmd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113554187
Transcription machinery [BR:
rmd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113554187
SWI/SNF complex
113554187
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113554187
PBAF complex
113554187
SWI/SNF complex
113554187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
113554187
NCBI-ProteinID:
XP_026813723
LinkDB
All DBs
Position
1:complement(73845504..73849814)
Genome browser
AA seq
375 aa
AA seq
DB search
MALRTYGDKPISFQVEENGEYYCIGSEVGNYLRLFRGSLYKRYPGMFRRTITNDERKRLI
DLGLSAHCLASSVSLLRASEVEDIIDGNDERYKAVSVTSTEPLITRESKGKKSVPWVPSL
PNSSHLDAVPQATPINRNRIIQKKVRTFPLCYDDTDPANIHENANFSELLVPIRLDMEIE
GQKLRDTFTWNKNESLITPEQFAEVLCDDLDLNPLPFVPAIAQSIRQQIEAFNNDNILDE
QHDQRVIIKLNIHVGNTSLVDQVEWDMGEKDNSPEQFAMKLCAELGLGGEFVTAIAYSIR
GQLSWHQRTYAFSEAPLSVVETPFRPPSDADQWSPFLETLTDAEMEKKIRDQDRNTRRMR
RLANTTPGCKLTRLP
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcactccggacgtacggcgacaagccgatcagttttcaagtggaagagaatggggaa
tattactgtattggatccgaggtcggcaattacttacgactgttccgcggttcactgtac
aaacggtatccgggaatgtttcgcagaaccattacaaatgatgagaggaaacgtttaatc
gatttaggtttaagtgctcattgtctggcttcgagtgtgtcacttttaagagcatctgaa
gttgaagatattattgatggtaatgatgaacgttacaaagccgtgtctgtaacttcaact
gaaccattaattacaagagaatctaaagggaaaaaatcagttccttgggttccatcatta
ccaaacagttcacatttagatgctgttcctcaggctacacccattaaccgtaacaggatt
atacaaaaaaaagtcaggactttcccattatgctatgatgatactgatcctgcaaacatt
cacgagaatgccaacttttcagaattgttggttccaatcagactcgatatggaaattgaa
ggacaaaaattgagagatacatttacttggaataaaaatgaaagtttaataacaccagag
cagtttgctgaagtgctatgtgatgatttagatttaaatcctttaccatttgtaccagcc
atcgcacaatctatacgtcagcaaattgaagcatttaataatgataatattttagatgaa
caacatgaccaaagagttattattaagttaaacattcatgtaggtaatacatcattagtg
gatcaagttgaatgggacatgggtgaaaaagataattcgcctgaacagtttgctatgaaa
ctatgtgctgaactaggtttgggcggagaatttgtaactgctattgcatactctatccgg
gggcaattgagctggcatcaacgtacctatgctttcagtgaggcaccattgtcagtcgtt
gaaactccttttagacctccatcagatgctgatcagtggagtccattcctggagacattg
actgatgcagaaatggaaaagaagattagagatcaagacaggaacactaggcgaatgcga
cgattggccaacactacaccaggatgtaagttaactcgcctaccgtga
DBGET
integrated database retrieval system
