Rhopalosiphum maidis (corn leaf aphid): 113554382
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Entry
113554382 CDS
T06065
Name
(RefSeq) breast cancer type 2 susceptibility protein-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03440
Homologous recombination
rmd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113554382
03460 Fanconi anemia pathway
113554382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmd04121
]
113554382
03036 Chromosome and associated proteins [BR:
rmd03036
]
113554382
03400 DNA repair and recombination proteins [BR:
rmd03400
]
113554382
Ubiquitin system [BR:
rmd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
113554382
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
113554382
DNA repair and recombination proteins [BR:
rmd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
113554382
FA (Fanconi anemia) pathway
Downstream FA components
113554382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA-2_helical
Tower
BRCA2DBD_OB2
Rep-A_N
Motif
Other DBs
NCBI-GeneID:
113554382
NCBI-ProteinID:
XP_026814000
LinkDB
All DBs
Position
2:complement(67036528..67049385)
Genome browser
AA seq
1677 aa
AA seq
DB search
MEKQKKSDEIKQNLKAKSPTIKSSLQDCSIQDISNPHGSNPIKKENHGMEVLKVSTPIIH
QSKALKKLNLLSNLQSTPNTRNFNKPEMDSRLIMNLSPIMSTSTLKQNLYNHKDIYQHKL
HADIDFSLNPLKYQNSSNLCKNHELNKWKKNKTLIEQTHKSNINDSTILPEITRQTNEDN
INEKAKRCLFEKDTNSMSNLDTDQDSLNISLDILEQVCQMSEIIDDSLTEEVKISVDTDK
KNKKLAFFLYGNSTSKLDDTEEENKLLQLALSMEDNVLTESRSKNKLCFEGEFTSLNQLK
NKETNLSKNGSEQSISNKFNTYICDSKCNFLDTEDMNDIGNTQMCEIADITEPLESFDDQ
WSQQYSSNVSYLSNNVKENNFQKDVNPVISTSIDLIDHKVNMKKNNLLDNTNERLKIFPS
IVRDELNEFPIVTKDDTTRNDNIYKGFSTAGGKSIKISDTALQKVQTMLKDELNESSTVI
KDVANTKTNACKGFSTAGGKSIKISDTALQKVQTMLKDELNKSSTVIKDVANTKTNTCKG
FSTAGGKSIKISDTALQKVQTMLKDELNESSTVIKDVANTKTNACKGFSTAGGKSIKISD
TALQKVQTMLKDELNESSTVIKDVANTKTNTCKGFSTAGGKSIKISDTALQKVQTMLKDE
LNESSTVIKDVANTKTNACKGFSTAGGKSIKISDTALQKVQTMLKDELNESSTVIKDVAN
TKTNTCKGFSTAGGKSIKISDTALQKVQTMLKDELNESLSVTHNNIVINSSMSKGFSTAG
GKYIKVSDEALTKVQTILKDECLLSVTKDNTNTNSNIYTQLLNAEDKSIRELDKSLQKHQ
VTYKNDTQLFDTSLKTMAISSDYNNSNKVLKSNTKSNCCENFKHEEESIFEDDLSLINTV
EKFERDQIVSKPILRNKRPGSPINKYEIGNKVKKIVHNEQWEIDELNTSFSVYLSKKLNG
PKVSLPEVVDWVLPKIFTTKKFPENGIAKELIRMNIDNAINLKLYWEKNYKLSDGHKNKM
YNFQDIKSFFLSHNFVDDKLVPNGWIENHFRFIVWKLAATEICFPGHFGNKLLTAKNIIH
QLLYRYYREIEKCQRSALKKILEKDETTSKRIVLCVSKVNKTNLAETYTIELTDGWYSVQ
GLIDHEMNMLLHKGIVKVGTKLIIYNAELIGAGEGIDPLDVHNDVKLKISTNSTRRVRWH
VKLGFYKNSTAPIPITLESVLPHGGIIGSLSLVILRKYPKMFLEKKTNSKSIFRNEKMEI
IEAEKYKAHQQKSLEIISNKIKTELIAEIASKTSISRKYITSMKKENLDKLNIDELNNIL
ENSTDPLEIQSLLSYEKLEALKDFKKSEQERFYNELQNRVNRVFNEQFKDARKVIPMIKL
RVVDKKYVSSGFKAALLTIWSPSEDVTDILNKSTEGQCCTFHHISTNGFINGELQLSANK
NTRFDFQGYNNEYAKRDVVNFKSILSGTFLPLFGELDFVGIVVSNVNKNNAYNEIYVSDK
EMNIISILFRGNIKEYGYDDMMYPGSIISGVNIQFKGFNNLSSMPKLYNTEQSLFTTNPK
TDYILKKFDEYKMFMKKPENQDFLVSCQTKLNEICNGHGETTTINNLNKSKNALHRSYGE
LPVTVVRTSNTSQSEFSPAQKRIKRLNSYGKTPPLNIVHTKPPDKKLMGQFKTPTRL
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcaaaaaaaaagtgatgaaattaaacaaaatttaaaagctaaaagtcctaca
attaaatcatctttacaggattgtagtatacaagatatttctaatcctcatggctcaaat
ccaataaaaaaggaaaatcatggcatggaagtattaaaagtatctactccaattattcac
caatcaaaagcattaaaaaaattgaatttattaagtaatttacaatcaacaccaaatact
cggaattttaacaaaccagaaatggattcaaggttaattatgaacctcagtccaattatg
tctacatcaactttaaaacaaaacttatataaccataaagatatttatcaacataaatta
catgcagacattgatttttcattaaatccattgaaataccagaattcatcaaatctttgt
aaaaaccatgaattaaacaaatggaaaaaaaataaaactttgattgaacaaactcataaa
agtaatattaatgattcaacaattttacctgaaattacaagacaaacaaacgaagataat
attaatgaaaaagctaaaaggtgcttatttgaaaaagatacaaatagtatgtctaatttg
gatacagatcaagattcacttaatatttctttagatatattagaacaagtgtgtcaaatg
tcagaaattatagatgatagtttaactgaggaagtaaaaataagtgttgatactgataaa
aagaataaaaaattagcattttttctttatggcaatagcacatctaaacttgatgatacg
gaagaagaaaacaaattattacaattggcattaagtatggaagataatgtattaactgaa
tctagatcgaagaataaattatgctttgaaggagaatttacctctctaaatcaattgaaa
aataaagaaactaacttatctaaaaatggaagtgaacaatctataagtaataagtttaac
acatatatatgtgactccaagtgtaactttttagatactgaagatatgaatgatattgga
aatacacagatgtgtgaaatagctgatataacagaaccattagaatcatttgatgaccaa
tggtcacaacagtattctagtaatgtatcttatttaagcaataatgtaaaagaaaataat
tttcaaaaagatgttaatccagtaataagtacatcaatagatttaattgatcataaagta
aatatgaaaaaaaacaatttattagataatacaaatgaaaggctaaaaatatttccatca
attgttagagatgaacttaatgaatttccaattgtgactaaggacgataccacaagaaat
gataatatatataaaggtttttcaactgctggaggtaaatctattaaaatatcagataca
gccttacaaaaagttcaaaccatgttaaaagatgaattaaatgaatcatcaacagttatt
aaagatgtagccaatacaaaaactaatgcctgtaaaggtttctcaactgctggaggtaaa
tctattaaaatatcagacacagccttacaaaaagttcaaaccatgttaaaagatgaatta
aataaatcatcaacagttattaaagatgtagccaatacaaaaactaatacctgtaaaggt
ttctcaactgctggaggtaaatctattaaaatatcagacacagccttacaaaaagttcaa
accatgttaaaagatgaattaaatgaatcatcaacagttattaaagatgtagccaataca
aaaactaatgcctgtaaaggtttctcaactgctggaggtaaatctattaaaatatcagac
acagccttacaaaaagttcaaaccatgttaaaagatgaattaaatgaatcatcaacagtt
attaaagatgtagccaatacaaaaactaatacctgtaaaggtttctcaactgctggaggt
aaatctattaaaatatcagacacagccttacaaaaagttcaaaccatgttaaaagatgaa
ttaaatgaatcatcaacagttattaaagatgtagccaatacaaaaactaatgcctgtaaa
ggtttctcaactgctggaggtaaatctattaaaatatcagacacagccttacaaaaagtt
caaaccatgttaaaagatgaattaaatgaatcatcaacagttattaaagatgtagccaat
acaaaaactaatacctgtaaaggtttctcaactgctggaggtaaatctattaaaatatca
gacacagccttacaaaaagttcaaaccatgttaaaagatgaattaaatgaatctttatct
gtaactcacaacaatattgttataaattctagtatgtctaaaggtttttctactgctggt
ggtaaatatattaaagtatcagacgaggctttaacaaaagttcaaacaatattaaaagat
gaatgtttattatcagttacaaaggataatactaatacaaactctaacatttatacacaa
ttattgaatgctgaagataaatctattagagaattagacaaatcattacaaaaacatcaa
gtaacatataaaaatgatacacaattatttgatacttcactaaaaacaatggccatttca
agtgattataataattctaacaaagttttaaaatcaaatactaaatcaaactgttgtgaa
aattttaaacacgaagaagaaagtatatttgaagatgatttgtctttaattaacacagtt
gaaaagtttgaaagagatcaaattgttagtaaaccaatactgagaaataaacgtccagga
agtcctataaataaatatgaaattggtaataaggttaaaaaaatcgtacataatgaacaa
tgggaaatcgatgagttaaatacttcatttagtgtttacttatcaaaaaaattgaatgga
cccaaagtatcattaccagaagttgttgattgggtcttaccaaaaatatttactactaaa
aagtttcctgaaaatggtatagcaaaagaactaatcagaatgaatattgataatgctata
aatttgaagttatattgggaaaaaaattataaattatctgatggccataagaataaaatg
tacaattttcaagatataaaatccttttttttatcgcataattttgttgatgacaaactc
gttcctaatggatggattgaaaaccattttcgttttatagtgtggaaattagctgctact
gaaatttgttttcctggtcattttggaaacaagttattaactgcaaaaaacataatacac
caactattatatagatattatagagaaatagaaaaatgtcaaagatctgcattaaaaaag
atattagaaaaagatgagactacatcaaaaaggatagttttatgtgtttcaaaagttaat
aaaacaaatttagctgaaacgtatactattgagctaactgatggctggtatagtgttcaa
ggacttattgatcatgagatgaatatgcttttacataaaggcattgtaaaagttggtact
aaacttataatatacaatgcagaacttattggtgctggagaaggaattgatccattagat
gttcacaatgatgtaaaacttaagatatcaacaaacagtacacgaagagtacgttggcat
gtcaagttagggttttataaaaattctacagcacccatacctattacattggaatcagtt
ctaccacacggtggaataattggatctctttcacttgtaatactgagaaagtacccaaaa
atgtttcttgaaaaaaaaacaaattcaaaatctatttttaggaacgagaaaatggaaatt
attgaagcagaaaaatataaagcacaccaacaaaagtcattagaaataatttcaaataag
ataaaaactgagttaattgctgaaatagcctctaaaactagtatatcaagaaaatacatt
acgagtatgaaaaaagaaaatttagataaattaaatatagatgaattgaacaatatttta
gaaaattccactgatcctttggaaatccaatcattgctcagttatgaaaaattggaagct
cttaaagattttaaaaaatcagagcaagaaagattctataatgaacttcaaaatagggtc
aatagagtatttaatgaacaatttaaagacgctcgcaaagtaatacctatgattaagtta
cgtgtcgttgataaaaaatatgtttcttctggctttaaagcagctttacttacaatttgg
agtccgtcagaggatgtcactgatatcttaaacaaatctactgaaggtcaatgttgtaca
ttccaccatatttctactaatggatttataaatggtgaactacaattatcagccaacaaa
aatactcgttttgattttcaagggtataataatgaatatgcaaaacgtgatgttgtaaac
tttaaaagtattttgtctggtacatttttaccactatttggtgaattagattttgttggt
attgtagtatcaaatgttaataaaaacaatgcttataatgaaatctatgtatcagacaaa
gaaatgaatataatcagtattttgttccgaggcaatattaaggaatatggttatgatgac
atgatgtatccaggcagtataatatcgggagttaatattcaatttaaaggattcaataat
ttatcttctatgcctaagttatataatacagagcaatctttatttacaacaaatcctaag
actgattatattttaaaaaaatttgatgaatataaaatgtttatgaaaaagcctgaaaat
caagattttttggtaagctgccaaactaaacttaatgaaatttgtaatggacatggagaa
acaacaacaataaataatttaaataaatcaaaaaatgcattgcatagatcttatggtgaa
ttacctgttaccgttgtgagaacttctaatacatctcaatctgaattttctcctgctcaa
aaaagaataaaaaggctaaattcttatggaaaaacaccaccattaaatattgttcacact
aaaccaccagataaaaaactgatgggtcaatttaaaacaccaacccgattataa
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integrated database retrieval system