Rhopalosiphum maidis (corn leaf aphid): 113554542
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Entry
113554542 CDS
T06065
Name
(RefSeq) nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113554542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113554542
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113554542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
DUF4239
Motif
Other DBs
NCBI-GeneID:
113554542
NCBI-ProteinID:
XP_026814228
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All DBs
Position
2:complement(73408725..73411541)
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AA seq
805 aa
AA seq
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MAGNTDWNSIVMTAEKLQANAITDTGMPSVTRNIRQLLDAAENLWTKVGVPGVEAKGNVF
LCSRGVDAPQVPKQLEKLSSAGSMDTLDPKPDMDVDSFVKNEVQNAILSLIESVKKSNED
FIDRRQSDATIRGWRNKKINIINSFPGYVPNPSSSPGSSVMPSVAKLNTTNFGLSAQLDQ
IELAYAKHLCEYNQHVEHHGVQTDILQSFTTAAEIAHDDRVNEMWKIVKCMSQIIPEHGS
KYARSSAVNQNTMIGNARTYLEQRYIVFMKSYVKSHMSKAKLGGIPGTYPLVRSFVSVYI
NQYNNPDKLFYDGVPFWPLVYYLIRCGDLESVVHILEKNNHDPVLLNVFTNLRNNHNYVN
LNDQGFTTSMVWDSNDPFKKVIYSLVSATDVSSKHSDVIKTADDYLWLKLCQVRNDQDKL
TYPVLQSMIYDEYKDQFSEVQPMSYFQLLFLTGQFESAIQFIFRHPKLCCHAIHVAIVLN
EMGLLYLPSDFNQPILSKDDNQIDRLNIARMMKIYCAKFENQDLKMAINYYYCLRHTEFK
GTTLFISYVAGLVNETDEYDRVFGYLKPDGKKQNGILDSFIVSETQKMDIIRTTASLAEQ
KCDLEVSAKLYELVGQYDKVLELANIMLSRVIQPDIFSSLDKTPNTKNKVFDYINVLNER
LIGVEINVTEEAIFTFNMLKNVFIFFEQYNNHKYILAFDVLQKIGLIPLAINEVEERLGS
FKKYNELILRIIPGVMTATMNMLYSQYSDIKKESKKSARDPEQMHAQLEYIREKAKAITS
FTGRVPFQINSEVINHLVQTEILLY
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaacaccgattggaattcgattgtgatgacggccgagaagctacaggccaac
gccatcaccgacacgggtatgccgagcgttacccggaacatacgacaactgttggacgcc
gccgaaaatctgtggaccaaagtcggcgtgccgggcgtggaggctaaaggcaatgtgttc
ttgtgcagtcgcggtgtggacgcccctcaggtgcctaagcagttggaaaagctcagctct
gcgggatcgatggacacactggacccaaagcctgacatggacgtagacagttttgtgaag
aacgaggtgcaaaacgcaatacttagcctaatagaatcggtgaagaaaagcaacgaggac
tttatagacaggcgacagagcgacgcaactatcaggggctggaggaacaagaaaatcaac
attatcaactcgttccctggctacgttcctaacccatcatctagtcctggttccagtgtg
atgccatctgttgccaaactcaataccaccaactttggcctgagtgcccagctggaccag
atcgaacttgcgtatgccaaacatttatgcgaatataatcaacacgttgaacaccacggg
gttcaaactgacattttgcagtcttttacaacagcagcagaaatcgctcatgatgaccgc
gtaaacgaaatgtggaaaatagtcaaatgtatgagtcaaatcataccagaacacggttcc
aaatatgccaggagttctgcggtcaatcaaaatacaatgattggaaatgccaggacctat
ctcgaacagaggtatattgtgttcatgaaaagctatgtaaagagccacatgtccaaagca
aaacttggtggtatccctggtacttatccacttgtgcgaagttttgtaagtgtctacatc
aaccagtataataaccctgataagttattttatgacggtgttccattttggccattggta
tactatctaattcgctgtggtgatttagaatctgttgtacatattttggaaaaaaataac
catgatccagtgttactaaatgtttttacaaacctaagaaacaaccataactatgtcaac
ttaaatgaccagggatttactacatcaatggtgtgggactccaatgatccatttaaaaaa
gttatttattcgttagtctctgctactgatgtgtcgagtaaacattcagatgtgatcaag
actgcagacgattatctttggttaaaactttgtcaagtcagaaatgatcaagacaaactc
acatatcctgtgctccagtcgatgatctatgatgaatacaaagatcaattcagtgaagtt
cagcctatgtcttatttccaattgctttttttaactggtcaattcgaatcggctattcaa
tttattttccgtcacccaaaactttgttgtcatgccatacacgtggctatagttttgaat
gaaatgggtttactgtatttgcccagtgactttaatcagccaattttatccaaagatgat
aaccaaatagatagattaaatatagccagaatgatgaaaatttactgtgccaaatttgaa
aatcaagatcttaagatggccattaactattactattgtctgagacacactgaatttaaa
ggaacaacactttttatttcatatgtagctgggcttgttaatgaaactgatgaatatgac
agagtatttggatatctgaaaccagatggtaaaaagcaaaatggtattttggactcgttt
attgtatcagaaacacagaaaatggatattatcagaacaacagcttcacttgcagaacaa
aagtgtgatctcgaggtgtcagctaaattgtatgaattagttggtcagtacgataaagta
ctcgaacttgccaacattatgctgagtcgagtcattcaaccggatatcttctcttcattg
gacaaaactcctaacacaaaaaacaaagtgtttgactatattaatgttttaaatgaaaga
ctaataggagtcgaaattaatgtaactgaggaagcaatttttacatttaatatgctgaag
aatgtttttatatttttcgaacagtacaacaatcacaaatacatattggcatttgatgtg
cttcagaaaattggtttgataccattggctataaatgaagtggaagaacggcttggttca
tttaagaagtacaatgaattaatattaagaattatacccggggtaatgacggccacaatg
aacatgttatattcacaatacagcgacattaaaaaagaatccaaaaaatctgccagggat
ccagaacaaatgcatgcacagttggaatacatcagggaaaaggcaaaagccataacatca
ttcacaggtcgtgtaccattccaaatcaactctgaagtaatcaatcatttagtgcaaacc
gaaattctattatattaa
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