Rhopalosiphum maidis (corn leaf aphid): 113554581
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Entry
113554581 CDS
T06065
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 27C-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113554581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113554581
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113554581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
113554581
NCBI-ProteinID:
XP_026814284
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Position
1:90364095..90375932
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AA seq
442 aa
AA seq
DB search
MRGKSDLEEDEQGKLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVT
FADPNNVNVVLQNGPHVLDGRTIDPKPCNPRTLQKPKRSSSYPKVFLGGLPSNVTETDLR
TFFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQVEIKKAEP
RDSNKMNDVGANQWGMNQNNHLAMGGMGMGGPGGQMGGPMGGMGPMGPGNMMQGYQGGWS
STPQSQYPGYGTPSGPGGFQGWGAPPGPQGQGMAPPTWGSNYAPPQQPGYGSYAPQAPPQ
SSYGNNWNWNIPQNGPAAATGPPGQTGPGPQNDMYSRSAGAAPATGPTPPGTAPQKAGDY
AGYGNYTGYQQDSTSYGAGQTYRGADGTAAGLGSGGGYVAPVVTPVVSAGVPAATYNNAP
GPTRANNYNSNQAQPYHPYRRN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcaaatctgatttagaggaagacgaacaaggaaaattgtttgtgggtggactc
agctgggaaactcaacaagaaagtcttcaaagatactttaaccgatatggtgaagtaatt
gattgtgttgttatgaaaaatagtgaaagtggacggtcaagaggttttggctttgtcaca
tttgctgatccaaataatgtaaatgtagtactacaaaatggtccacatgttttggatggt
cgcactattgacccgaaaccatgcaatcctagaactttgcaaaaaccaaagagaagttca
agctatcctaaggtttttttgggtggtttgccatctaatgttacggaaactgatttaaga
acttttttttcacgatatggaaaagttatggaagttgtaatcatgtatgatcaagaaaag
aaaaaatcaagagggtttggatttttgtcgtttgaagatgatgatgctgttgatagatgt
gtagctgagcattttgtcaaccttagtggcaaacaggttgaaattaaaaaagctgaacca
agagattcaaataaaatgaacgatgttggagccaatcaatggggcatgaatcaaaataat
catttagcaatgggtggaatgggcatgggtggcccaggtggacaaatgggaggtcccatg
ggtggaatggggcctatgggtccaggaaatatgatgcaaggctatcaaggaggatggagt
tctactcctcaatctcagtaccctggttatggcactccatctggtccaggtggattccaa
ggatggggagctccacctggaccgcaaggtcaaggaatggctcctccaacttggggttca
aactatgctccacctcaacaacctggatacggttcatatgcacctcaagcacctccacaa
tcaagttacggaaataattggaattggaatatacctcaaaacggacctgccgcagctact
ggacctcctggacaaactggcccaggacctcaaaatgatatgtattctcgttctgctgga
gcagcaccagccactggacctactccgcctggaactgccccacagaaagctggtgattat
gctggctatggaaactacactggctatcaacaggattcgaccagctatggtgcaggccaa
acttatagaggggcggacggcacagccgctggcctcgggtctggcggtgggtatgtggcc
ccagtagtgacgccagtcgtttccgccggagtaccggcggcgacgtacaataacgcccca
ggaccaaccagagcgaataattataattcaaaccaagcacaaccataccatccttacagg
cgcaactga
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