Rhopalosiphum maidis (corn leaf aphid): 113554834
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Entry
113554834 CDS
T06065
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113554834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmd04121
]
113554834
Enzymes [BR:
rmd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113554834
Ubiquitin system [BR:
rmd04121
]
Ubiquitin ligases (E3)
HECT type E3
113554834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
113554834
NCBI-ProteinID:
XP_026814693
LinkDB
All DBs
Position
2:complement(62660890..62677240)
Genome browser
AA seq
1989 aa
AA seq
DB search
MAEQASSALVNASSISTRRGNIEGNTRSRVNSRKDSKKSTNSQVDVGILNSDNTETPIVN
DSTTSIQSIRKSKSATRNTRTSNSNTLIQKESPSTSRKSIISKSPKNRKQKVDNLTFSPA
ENRYPLRSKSKGPSRSEENNLTNELSTQEIEPSPNKRPKLELPTLGTSSSQSKNKEETNL
RASLPLRRKRGRPTTGSCASSSRRGNTKASGREAAELAMEGVVEGDGMAEGNDDMNNILP
STSSSISTNAPDMATSSTTSNTNPSSSGSQATGGGVNWPTAWSSGTTSHDSEEEGEVGRL
QALLESRGLPPHLFGALAPRMHHLFNRSMGAASTTSKAQQLLQGMQATGDEGQQLQAVIE
MCQMLVMGNEDTLTGFPVKPVVTALIILLSMEHNFDMMNHACRALTYMMEALPRSSAAVL
DAVPAMLDKLQAIQCMDVAEQSLSALEMLSRRHGRSILQSNGVAACLTFIDFFSINAQRA
ALAITANCCQNMNADEFHYVSKSLPLLSSRITQQDKKSVESVCLAFSRLVENFQSDSNKL
KEIASDELLTNLQQLVVASPPVMSTNTFIMVLRMMSTLCTNCPELSQTLLKNNIAETLGY
LLTGSPSPELTQIELLPRSSQELYEVTCLIGELMPRLPADGLFSVDSLLDRHGIYGTIQG
TGASQQMVQWQWRDDRSMWHSYTSLDSRIIEVAHQAGEDEVLLSHAPYTIDLHSMRQINE
DTGTTRAIQRKVLTVPSSFNNNHQTRSTTDVETVVASFGENELAGAFVRLLFSILYEVYN
SSAGPLVRYKCLRALLRMVYYSPAELLLKVVTQKQMVASHIAGMMASQDLRIVVGAIQMA
EILMQKLPQVFETHFIREGVMHQVKQLAEADIQTPVKCSPSTSSAGIEGLPGPSRSTHND
NTNQCPIPIENGNEVQSTTSGTEIEAESIPEATILAQVARCSTNRMSEVFKRNKKHNKRQ
SASAARKKGNQDNEVNDVQTIASSSASSSNTISPNSAQAITLHEFFISKGGNTSASRAVG
VNSSSSRTRFSNSNFKSTSGFLASLNPARLLRSTERAFSKELNKNSNMHINGAAILTNQA
SNISAVNKEKAKLWVKERSQHFMILYDKSTKDEEMTAENEKSESILARLTKAISKLQNEG
NDDINALLELREIVLTSDISPFEVNHSGLIKSLTIYLTEVTLGFDHRSERLRKFLHVFAG
CPLDSFEPFTAKNHNNVETRPFSALIGKLGSCVSQLEQFPVKVHDLSTGAGNSALKFFNT
HQLKCLLQRHPDCNNLKQWKSGTVKIDPLALVQAIERYLVVRGFSHIRENNQSKSDDDNS
DDDIDDTLAAVVIGQGSARHKLQFLIGNHILPYNMTVYQAVRQFSTTSDMETDNESELPL
GSAGIWVQTHTIYYRPLPEDTEVHSPKPTTSSSGKKGRSGTHKSASKKVKDELWLEGVVS
PIKSSLEPYLQLSLPEYVQIQDPSLPVLSLLRVLNAINRYWTSLYPTQLHNNSIIPFNEF
INVKISAKANRQLQDPLVIMTGNLPAWLQQVASACAFLLPFETRQLLFYATVFDRDRALQ
RLLDSSSELQGAGNNTNGDMHDRVAPRLDRRKRSVTRSNILSQAEAVISENATSRALLEI
QYEDEVGTGLGPTLEFYALVSKELQKADLELWNNPSRSESDPYVRSSEGLYPNPLSRTSK
LPHQVKMKSKFKFLGKFMAKAIMDSRLLDLPLSITMYRWLLGHENYLTLGDLSYIVPEIY
KTLSQLHQLVLEKRLILIDNTLSDEQKTEKIRKITLDGCPVEDLGLNFTLPGHASIELRK
NGVNIDVTIDNLEKYIQLVCHWFLREGVSKQMESLREGFESVFSLKRLGQLFYPEELEAI
FCGHTNTTKNWDVRMLSESCRLDHGYTGNSRAIGFLFKILSEYDYQQQRDFLRFVTGAPR
LPVGGFKSLSPALTIVRRIFDDNDNPDDYLPSVMTCVNYLKLPDYSSIDLMRKKLQLAAS
EGQHSFHLS
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacaagctagttccgcgttggttaacgcgtcttctattagtaccaggagggga
aatatagaaggaaatactagatctagagtaaattctcgcaaggatagtaaaaaaagcaca
aatagtcaggtggatgtgggtatattaaattcagataatactgaaacaccaattgtgaat
gattcaactacatctattcaaagtattcgtaaaagtaaatcagctactaggaatactcgc
accagtaattctaatacactaatacaaaaagaatcaccaagtaccagtagaaaatcaata
atatccaaatcaccaaaaaatagaaaacagaaagtagacaacttgacttttagccctgct
gaaaatagatatccattgcgcagtaaatcaaaagggccttcgcgctctgaagaaaataat
ttaacgaacgaactttctacccaagaaatagaaccatctccaaataaacgcccaaaatta
gaactccctacgctgggtacgtcttcaagtcaaagtaagaacaaggaggaaactaattta
cgcgcgtctttaccgctgcgtaggaaacgaggaagaccaacaacggggtcttgtgctagt
agcagtcgccgcggtaataccaaagcgagtggaagagaggcggcagaattggctatggaa
ggcgtggttgaaggggatggaatggctgaaggcaatgacgacatgaataatatcctacca
tctacatctagttcaattagcactaatgcccctgatatggctacatcatctactacttcc
aataccaatccttcttcatctggatcacaagctactggaggtggtgtaaactggcctaca
gcatggagtagtggcactactagtcatgatagtgaagaagaaggtgaagttggacgttta
caagcattgttagaatctagaggattaccacctcacttattcggtgcattagcccctcgt
atgcaccatttgttcaatcgttctatgggtgctgcatctacaacctccaaagctcaacaa
ttattacaaggaatgcaagctacaggagatgaaggacagcagcttcaagctgttattgaa
atgtgccaaatgttggttatgggtaatgaagatactttaactggttttcctgtgaaacct
gtagtcactgcactaataattttactttcgatggaacacaattttgatatgatgaatcat
gcttgtcgtgctttgacttatatgatggaagcacttccacgttcatcagctgctgttctt
gatgctgttccagctatgttagataaactgcaagctattcagtgtatggatgttgctgaa
caatctctttctgctttagaaatgctttctagaagacatggacgatctatattacaatct
aatggtgtggctgcatgtttaacttttatagatttctttagtattaatgcacaaagagca
gctctagctatcactgcaaattgttgtcaaaatatgaatgctgatgaatttcactatgtt
tccaagtcattgccattactgtcaagtcgtattactcaacaggacaagaaaagcgtagaa
agtgtttgtttagcatttagtcgcctagttgagaacttccaatctgattcaaataaatta
aaagaaattgcaagtgatgaactgttgactaatcttcaacaattggttgttgcatctcct
cctgttatgagtactaatacatttattatggtgttaagaatgatgtcaacattatgtaca
aattgtccagaattgtcacaaactttacttaaaaataacattgctgaaactcttggctac
cttcttactggatctccttctccagaacttactcagattgaattacttccaagaagttct
caagaattatatgaagttacatgtctaattggtgaactcatgccaagattgcctgctgat
ggattgttttcagttgatagtcttcttgatcgtcatggcatttatggcacaattcaagga
acaggagcttctcaacaaatggtacagtggcaatggagggatgatagatctatgtggcat
tcttatacatcattagattcaagaataatcgaggttgcacatcaagctggtgaagatgaa
gttctattaagtcatgctccttacacaattgatctccattctatgagacaaattaatgaa
gatactggtactacacgagcaattcaacgtaaagttttaacagttccgtcatcttttaat
aataaccatcaaacaagatctaccactgacgtagaaacagtggttgcatcatttggtgaa
aatgaactggctggagcatttgtacgtttattatttagtatattatatgaagtttataat
agttcagctggcccattggtcagatataaatgtctacgtgcattattgcgtatggtttac
tactctccagcagaattgcttttgaaggttgttactcaaaaacaaatggttgctagtcat
atcgctggtatgatggcatctcaagatttgcgtattgtagttggtgcaatacagatggct
gaaattttaatgcaaaaacttcctcaagtttttgaaactcattttatacgtgagggtgtt
atgcatcaagttaaacaattagctgaagctgatattcaaacacctgtgaagtgttcacca
tctacttcaagtgctggaattgaaggattaccagggccatctagaagtactcataatgac
aacactaatcaatgtccaataccaattgaaaatggaaatgaagttcaatcaacaaccagt
ggtactgaaatcgaagcagagtctatacctgaagcaactatcttagctcaagtagctcgt
tgttctactaaccgtatgtcagaagtatttaaacgaaataaaaaacataacaaacggcag
tctgccagtgctgcacgtaaaaaaggaaatcaagacaatgaagtgaatgatgtacaaact
atagctagtagtagtgccagtagcagtaatactatttcaccaaattctgctcaagctatt
acactacatgaattttttatatctaaaggtggtaacacttctgcatcgcgtgctgtaggt
gttaattcatcttcatcaagaacacgtttttccaattcaaattttaaatcaacttcaggg
tttttagcatctttaaatccagcaagacttttaagaagtacagaaagggcattttctaaa
gaattaaataaaaattccaatatgcacatcaatggagctgcaattttaacaaatcaagca
tcaaatataagtgctgtcaataaagaaaaggctaaattatgggtgaaagaaagatcgcaa
cattttatgattttatatgataaaagtacaaaagatgaagaaatgactgctgaaaatgaa
aagtctgaaagtattttagcacgacttacaaaagctattagtaaattacaaaatgaggga
aatgacgatataaatgctcttttggaattaagagaaatagtcttgacctcagacatatca
ccatttgaagtcaatcatagtggattaattaagtcacttactatatacttaactgaagtc
acattaggttttgatcatagaagtgaaagattacggaagtttttacatgtttttgctggt
tgtcctctcgatagttttgaaccatttactgcaaagaatcataacaatgtagaaactcga
ccattttctgcattaataggaaagttgggtagttgtgtatcacaattggaacaatttcca
gttaaagtacatgacttatcaactggggctggaaatagtgctctgaaattttttaataca
catcaacttaagtgcctgttacaaagacatccagattgcaataatttgaaacaatggaaa
agtggaactgttaaaattgatccattggctttagtacaagcaattgaaagatatttagta
gttagaggcttttctcatattagagaaaataatcagtctaaatctgatgatgacaattct
gatgatgatattgatgacactttggcagcagttgtgataggacaaggatcagcaagacat
aaattgcaattccttataggcaatcatatacttccttataatatgactgtatatcaagct
gttcgtcaattttctacaacaagtgatatggagactgataatgaatctgaactaccatta
ggatcagctggaatatgggtgcaaacacatacaatttattacaggcctttacctgaagat
acagaagtacattcacctaaacctactactagcagttcaggtaaaaaaggtagatcagga
actcacaaaagtgcctctaaaaaagtgaaggatgaactatggttagaaggagtagtttct
cccatcaaatcatctcttgaaccatatcttcaattgtcattgcctgagtatgttcaaatt
caagatccttcattaccagtactcagtcttttaagagttttaaatgccattaatagatat
tggacttcattatatccaacacaacttcataataattctataataccatttaatgaattt
atcaatgttaaaatatctgcaaaagcaaacagacaacttcaagacccgttagtgattatg
actggaaacttaccggcttggcttcaacaagttgcatcagcatgcgcatttttattacca
tttgaaacacgacaattattattctatgcaactgtatttgaccgggaccgtgcattgcaa
cgtttacttgactctagttctgaacttcaaggtgctggaaataatactaatggtgacatg
catgatcgtgttgcaccacgtttagatagacgtaaacgttcagtaactagatctaatatt
ctttctcaagctgaagctgtgatatctgaaaatgccacttcgcgggccttactagaaata
caatatgaagatgaagtggggacaggtttaggaccaactttagagttttatgcattagtt
tcaaaagagttacaaaaagctgatttagaattgtggaacaatccttcaagatctgaatct
gacccttatgttcgttcatcagaaggactttatcccaatccattatctcgaactagtaaa
cttccacatcaagttaaaatgaaatcaaaatttaaatttttaggaaagtttatggccaag
gctattatggattcaagattactggatttaccattaagtattaccatgtatcgttggcta
ttaggccatgaaaattatcttacacttggcgatctttcatacatagttcctgaaatatac
aaaactttatcacaacttcatcaattagtactcgaaaaaagactaatccttattgataat
actctaagtgatgaacaaaaaactgaaaagattagaaaaattactttagatggctgtcca
gtagaagatttgggacttaattttacattgcctggacatgcttcaattgaattacgcaag
aatggtgtaaatatagatgtcacaattgataatttggaaaagtatatacagttggtttgt
cattggtttttacgggaaggcgtttccaaacagatggaaagccttcgagaaggatttgaa
agtgtattctctcttaaacgccttggacaactattctatcctgaagagctggaagcaata
ttttgtggacatacaaacacaactaaaaattgggatgtgcgtatgttatctgagtcgtgt
cgtttagatcatggatatacaggaaattctagagctatcggatttctttttaaaatattg
tccgagtatgattaccaacaacaaagagattttttgagatttgttactggagcaccacgt
cttcctgttggaggtttcaagtcactttctcctgcgttgaccattgtgcggcgaatattt
gatgataacgataatccagacgattatttaccatctgtaatgacatgtgtgaactacctt
aaactaccagattactctagtatagatttaatgaggaaaaaactgcaactggctgcatct
gaaggacaacattccttccacctttcataa
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