Rhopalosiphum maidis (corn leaf aphid): 113554853
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Entry
113554853 CDS
T06065
Name
(RefSeq) spectrin beta chain isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04517
IgSF CAM signaling
rmd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113554853
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113554853
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rmd04812
]
113554853
Cytoskeleton proteins [BR:
rmd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
113554853
Intermediate filaments
Intermediate filament-binding proteins
113554853
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Phage_tail_terminator_6
CH_2
Motif
Other DBs
NCBI-GeneID:
113554853
NCBI-ProteinID:
XP_026814718
LinkDB
All DBs
Position
2:45873160..45898771
Genome browser
AA seq
2378 aa
AA seq
DB search
MTTDISVVRWDPAIQQDGTGIVEDYEYDGGNSSSRLFERSRIKALADERESVQKKTFQKW
VNSHLVRVHSRIGDLYIDLRDGKMLIKLLEVLSGERLPKPTKGKMRIHCLENVDKALQFL
KDQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNKETKSAKDALLLWC
QMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLVQFEKLSKTNAMYNLNNAFNTAED
KLGIVKLLDAEDVFVEQPDEKSIITYVVTYYHYFSKMKQETVQGKRIGRVVGIAMENERT
AQEYERLTSDLLQWIKQTKESLAERKFLNSLNGVQQQLQQFNNYRTVEKPPKFVEKGNLE
VLLFTLQSKMRANNQKPYTPKEGKMISDINKAWEQLEKAEHERELALREEIIRQEKLEQL
AQRFNRKASMRETWLSENQRLVSQDNFGLDLAAVEAAAKKHEAIETDIFAYEERVEAVVT
VAQELETEDYHDIVRINARKDNVLRLWNYLLELLKARRHRLELSLQLQQNFQEMLYILDS
MEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQHSQRFLDEENTEGY
RPCDPAVIIERVQELEDAYSELVKLAVERRARLEESRKLWQFYWDMADEENWIKEKEQIV
SAGDIGHDLTTINLLLSKHKALENEIQSHESQLLEVVKVGEDLINSNHFGADRIQERVSS
THSMWEHLIGLAKQRRKRLEDAVDYHQWFADADDVDIWMLDTLRLVSSEDVGRDEANVQS
LLKKHKEVSEELKSYSQTVEALRSQANQLSAEPGAPTSGPEVNERMSSIDKRYKELVELA
KLRHQRLLDALSLYKLFSEADAVQQWIGEKNRMLETMSPGKDIEDVEIMKHRYDGFDKEM
NSNASRVAVVNQLARQLLHVEHPNSDEIVNRQNNLNHEWADLRDKAEAKRDQLNSAHGVQ
TFHIECRETISWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLESE
AQMNEKDHPEEAAVIRERIETIQKDWEELTQMLKERDSKLEEAGDLHRFLRDLDHFQVWL
TKTQTDVASEDIPSSLSDAEKLLSQHQAIREEIDNYTADYTQMMEYGEKVTAEPGTQDDP
QYMFLRERLKALRDGWQELHKMWENRQQLLSKSLNLQMFNRDARQAEVLLSQQEHALSKD
EVPSNLEHAENLIKRNEAFMTTMEANEDKINAVTQFANKLVDEDHFEADKIKKKAASIHE
RRDANREKAQELMDQLKDQLQLHQFLQDSDELQQWIQEKKFTAQDETYRSAKTVHSKWTR
HQAFEAEIASNKDRLDRVQQSGEELMKEKPELAQIIQPKISEMLGQFDDLEKTTKEKGER
LFDTNREVLIHQTCEDIDSWMDDLEKQIEAADTGTDLASVNILMQKQQMIETQMAVKAKQ
VVELETQAEYLKKTVPEKVETIIPKKTKVEERFEQLKEPLKVRQRQLEKKKEAFQFRRDV
EDEKLWIAEKTPMATSTEYGNSLFNVNMLQKKNQSLGNEIDNHEHRINLVCGNGQKLIDE
GHEDASQFTDLIHDLTQRWQQLQQAVEHRRKMLLQSEKAQQYFFDASEAESWMGEQELYM
MVEDRGKDQISAQNLKKKHESLELAVDNYADTIRQLGETARQLTSEMHPESDQIAVKQSQ
VDKLYAGLKDLAGERRAKLDEALKLFMLHREVDDLEQWIAEREIVAGSHELGQDYDHVTL
LWERFKEFAHDTEATGSERVATVNGIADQLINIGHSDSATIAEWKDSLNEQWQDLLELIE
TRTQMLVASRELHKFFHDCKDMVSRIAEKSHEMSEDLGRDAGSVHTLQRKHQSFLQDLHT
LSTQVQTISEDSARLQTSYAGDKAKEITGREAEVVNAWAALQSECELRKQKLADTGDLHK
FFNMVRTLTLWMDDVVRQMNTSEKPRDVSGVELLMNNHQSLKAEIDTREDNFTACISLGK
ELLSRNHYASNEIKDKLMLLNTQRNSLLNRWEERWENLQLILEVYQFARDAAVAEAWLLA
QEPYIMSLELGMTIDQVENLIKKHEAFEKSAIAQEERFCALERLTTFELKEIQRRKEEEE
RKRQEELAKQAAQAEAEAAEKAAAEEASEADGKLAKDGEGRPVHESSASSRKSIASPAAP
AGVARSASTLPSTSRSQLVKDRNKDRSRSKSPFRSFRWKKSPQKTPLSAVSASDDEATVE
PTSDQSATEADGEILEGILNRKHEWESTTKKASNRSWDKVFVCVQGTNLAFYKDAKTAKT
SPETYFKGEAPIDLHGGTADVATDYTKKKFVLRAKLASGAEFLFQARNEAEMRQWVSTLK
NVCEQDAAGTQSRSQTLPAVGDKRDEPKRRSFFTLKKV
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagatatctcggtggtccggtgggacccggccatacaacaagacggaaccggt
attgttgaagattatgaatatgacggtggaaactcttcttccagattatttgaaagatcc
agaattaaagctttggctgacgaaagagaaagtgtacagaaaaagacgtttcaaaaatgg
gtaaattcgcacttggttcgagtacactctcgaattggagatttatacatagacctcaga
gacggaaaaatgcttataaaactattagaagttctttctggagaaagattgccaaaacct
accaagggaaaaatgagaatacattgtttagaaaatgtagataaagctttgcaattttta
aaagaccaaagagtacatttggaaaacatgggttctcatgatattgttgatggaaatcca
aggctttcgttgggtcttatatggacaattattcttagattccaaattcaagacattacc
attgaagaaactgacaataaagaaacaaaatctgcaaaggatgctctacttttgtggtgc
caaatgaaaacagctggctaccacaatgtcaatgttcgcaatttcacaacttcctggcga
gatggtcttgcatttaatgcaatcattcacaaacaccgccctgatcttgtacaatttgaa
aaactaagcaaaactaatgccatgtacaatttgaataacgcgttcaatacggctgaagac
aaattaggaattgtaaaattattggatgctgaagatgtatttgttgaacaaccggatgaa
aaatcaattatcacatatgtggttacatactatcattacttcagtaaaatgaaacaagaa
acagttcaaggaaagagaattggtcgtgtcgttggtatagctatggaaaatgaacgtaca
gcccaagaatatgaacgtttaactagtgacttattacaatggatcaagcaaacaaaagag
tcattagctgagagaaaattcttgaattctttgaatggtgttcaacagcaattacaacaa
tttaacaactatagaactgttgaaaaacccccaaaatttgtcgaaaaaggaaatttggaa
gtgttgcttttcacgttgcaatctaaaatgagagctaataatcaaaaaccatacactccc
aaagaaggaaaaatgatttcagatattaataaggcttgggaacaattagaaaaagcagaa
catgaaagagagttggctttaagagaagaaattataagacaagaaaaacttgaacagcta
gctcaaagatttaatagaaaagcaagcatgcgagagacatggttaagtgaaaatcaacgg
ctagtttctcaggataattttggtttggatttggcggctgtagaagcagctgcaaaaaag
cacgaagctatcgaaacagatatatttgcatatgaagaacgagtagaagcagttgtaaca
gtggcacaagaattagaaacagaggactatcatgatattgtccgtataaatgcaagaaaa
gacaatgttcttcgtctatggaactatcttcttgaactcttaaaagctcgtcgtcatcgt
ctagagttgtcattacaattacaacaaaacttccaagaaatgctatatatattggattct
atggaagaattgaaaatgagacttttgtctgatgattatggcaaacacttgatgggagtt
gaagatcttcttcaaaagcacagtctcgtagaagctgacattaatgttttaggagaaaga
gtgaaaagcgttgtgcaacactcacaacgtttcttggatgaagaaaatacagaaggttat
agaccctgtgatccagctgttattattgaaagagttcaggaacttgaggacgcttatagt
gaattggtcaaattggctgttgaaagacgtgctcgtcttgaagaaagcaggaaattatgg
caattttattgggatatggctgatgaagaaaattggattaaggaaaaagaacaaattgtt
tctgctggagatattggtcatgacttgaccactattaatttgttgctttcaaaacataaa
gcactagaaaatgaaatacagagtcatgaaagtcaattgcttgaagtggtaaaggttgga
gaagatttgattaatagcaaccattttggtgccgatcgtatacaggaacgagtatccagt
acgcattccatgtgggaacatttaatcggcttagccaaacaaaggcgcaaacgtttggaa
gatgcagttgattatcaccaatggtttgctgatgctgatgacgttgacatttggatgtta
gatactctaagattagtgtcttcagaagatgttggccgagatgaagctaatgtccaatca
ttgttaaagaaacacaaagaggttagtgaagaactaaaatcctattcacaaactgttgaa
gcattgcgatctcaagccaatcaattaagtgctgaaccaggtgcaccaacaagtggacct
gaagtaaatgagcgtatgtcatcaattgacaagcgctataaagaattggtcgaattagcc
aaacttcgacaccagagactcttggatgctctttctttgtacaagcttttcagtgaagct
gatgctgtacaacaatggattggagaaaagaaccgcatgttggaaaccatgagccctgga
aaggacatagaagacgtcgaaataatgaaacatcgttatgatggttttgataaagaaatg
aattcaaacgcatcacgagttgcagttgtgaatcaactagcacggcaattacttcatgtt
gaacatcctaactcagatgaaatcgtaaacagacaaaacaatttgaatcatgaatgggct
gatttacgagataaagctgaagccaaacgtgaccaacttaattctgctcatggtgtacaa
actttccatattgaatgtagagaaactatttcatggattgaagataaaaagagaatttta
caatctacagacagtctagaaatggaccttactggtataatgactttacagcgtcgttta
tctggtatggaaagagacttggctgccattcaagccaaattagactcattagagtctgaa
gcacaaatgaatgagaaagatcatcctgaagaagctgctgtaatccgagaaagaattgaa
acaatccaaaaagattgggaagaattaacacaaatgttgaaagaacgagattctaaacta
gaagaagctggtgaccttcatcgtttcctacgtgatttagaccacttccaagtttggttg
accaaaactcaaactgatgttgcttcagaagatattccctcttcattatcagatgctgaa
aagcttctttcccaacatcaagcaatccgtgaagaaattgataattatactgctgattat
actcaaatgatggagtatggagaaaaagttacagctgaaccgggaacacaagacgatcct
cagtatatgttcttgcgagagaggctcaaggctttgcgtgatggatggcaagaattgcac
aagatgtgggagaatagacaacaacttctttccaaatcactcaatctgcaaatgtttaac
cgtgacgctcgtcaagctgaagtattactttctcaacaagaacatgctctatctaaagat
gaagtaccatcaaatcttgaacatgctgaaaacttaattaaacgtaatgaagcattcatg
accacaatggaagctaatgaagacaaaattaatgctgtcactcaatttgctaataaactt
gttgatgaagaccatttcgaagctgataaaattaaaaagaaagcagcttccatacatgaa
cgtcgtgatgcaaatcgtgaaaaagcccaagaacttatggatcaacttaaagatcaatta
caacttcaccaatttctccaagattctgatgaattacaacaatggatccaagaaaagaaa
tttacagctcaagatgaaacgtatcgaagtgctaagacagtacatagtaaatggactcgt
catcaagcatttgaagcagaaattgcatccaataaagatagattagatagagtacagcaa
tcaggagaggaattaatgaaagagaaacctgaattggctcaaataattcaaccaaagata
tctgaaatgttaggtcaatttgatgatcttgaaaaaactacaaaagaaaagggtgaacgt
ttgtttgatactaatagagaagttcttatacaccaaacttgtgaagatattgattcatgg
atggatgacttagaaaaacagattgaagctgctgatactggaactgatttggcttctgtc
aatatacttatgcagaaacaacagatgatagaaactcaaatggctgtaaaagctaaacaa
gttgttgaattagaaacacaagctgaatatttaaaaaaaaccgttcctgagaaagttgaa
acaattattccaaagaagactaaagtagaagaaagatttgaacaacttaaggagccattg
aaagtaaggcaaagacagctggagaaaaagaaagaagcattccaatttagacgagatgtt
gaagatgaaaaattgtggattgctgaaaagacaccaatggctacatctactgagtatgga
aatagtttgttcaatgtcaacatgttacaaaagaaaaatcaatctttgggtaatgaaatt
gataaccatgaacaccgcattaatcttgtctgtggcaatggccaaaagttaattgacgaa
ggacatgaagatgcttcacaattcacagacctcatacatgacttaactcaacgctggcaa
caacttcaacaagctgttgaacatcgtagaaaaatgttacttcaatctgaaaaggcccaa
caatacttcttcgatgccagcgaagcagaaagttggatgggtgaacaagaattatatatg
atggtggaagaccgtggaaaagatcagatttcagcacaaaacttaaaaaagaaacatgag
tccttagaattagctgttgataattatgctgatacaatcagacaattaggtgaaactgct
cgtcaacttacaagcgaaatgcatcctgaaagtgaccaaatagctgtaaaacaatctcaa
gtagataaattgtatgctgggctaaaggatttggctggagaacgtagagctaaattagat
gaagctttgaaattatttatgttgcatcgtgaagttgatgatttagaacaatggattgct
gaacgtgaaattgttgctggttcacatgaacttggccaagattatgaccatgtcactttg
ttatgggaaagatttaaggaattcgctcatgatactgaagcaacaggtagtgaacgtgta
gcaacagttaatggtattgctgatcaacttattaacattggtcacagtgactcggccacc
attgctgaatggaaggacagtttaaatgaacaatggcaagatttactagaactaatcgaa
actagaacacaaatgttagttgcttcacgagaattacataaattcttccacgattgcaag
gatatggttagtcgtattgcagagaaaagtcatgaaatgtctgaagatcttggtcgtgat
gctggttctgtccacacattacaacgtaaacatcaaagtttcttacaagatttacataca
ctcagcactcaggttcaaactattagcgaggattctgctcgattacaaacatcatatgct
ggtgataaagctaaggaaattactggacgagaagcagaagttgtaaatgcttgggctgct
ttacaatcggaatgtgaattgcgcaaacaaaaattagccgatactggtgatttacacaaa
ttcttcaatatggtcagaacattaaccttatggatggacgacgttgtaagacaaatgaac
acatcagaaaaaccaagggatgttagtggagtagaattgttaatgaataatcaccagagt
ttaaaagcagaaattgacaccagagaagataatttcacagcatgcatttccttaggaaaa
gaattactttcaagaaaccattatgcttctaatgaaataaaagataaattgatgttatta
aatacccagagaaattcattattgaataggtgggaagaacgatgggaaaatcttcaatta
attttggaagtatatcaatttgccagagatgctgcagttgccgaagcatggttattagcc
caagaaccatacattatgagtctggaattaggtatgactattgatcaagtggaaaattta
ataaaaaaacatgaagcatttgaaaagtcagccatagcacaagaagagaggttctgtgct
ttagaacgattgacgacttttgaattgaaagaaatccaacgtagaaaagaagaggaagaa
cgaaaacgtcaagaagagttagctaaacaagcagctcaagcagaagctgaagcagctgaa
aaagctgctgcggaagaagcatcagaagctgatggaaaattagctaaagatggagaaggt
cgtcctgtgcatgagagctctgcatcgagtaggaagagcattgccagtcccgccgcgccc
gcgggggtcgctagatccgcatctacattaccctcaacttcgcgaagccaattagtcaaa
gatcgcaacaaggacaggtcgcgctcaaaatcaccgttccgcagtttccggtggaaaaaa
tcaccgcaaaagaccccgttgtctgctgtgtcagctagtgacgacgaggccaccgttgaa
ccgacttcagatcaatcagccaccgaagctgatggtgaaattcttgaaggaatactcaac
aggaaacacgaatgggaatctaccacgaaaaaagcgtccaatagatcttgggacaaggtg
tttgtgtgcgtgcagggcactaacttggcgttctacaaggacgccaagacagccaaaacg
tcgcctgagacgtacttcaagggcgaggcgcccatcgacctacatggcggcacagccgac
gtggctaccgactacactaaaaagaaattcgtgttgcgcgccaaattggccagtggggcc
gagttcctgttccaggcccgcaacgaggccgagatgcgccaatgggtgagcacgctgaag
aacgtgtgcgaacaggacgcggccggcacgcagtcccgatcgcaaacactgcccgcggta
ggcgacaagcgcgacgagcccaagcgccgcagtttcttcacgctgaagaaggtgtga
DBGET
integrated database retrieval system