Rhopalosiphum maidis (corn leaf aphid): 113554927
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Entry
113554927 CDS
T06065
Name
(RefSeq) ATP-dependent helicase brm
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113554927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmd03021
]
113554927
03036 Chromosome and associated proteins [BR:
rmd03036
]
113554927
Transcription machinery [BR:
rmd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113554927
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
113554927
Chromatin remodeling factors
BAF complex
113554927
PBAF complex
113554927
GBAF(ncBAF) complex
113554927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
BRK
HSA
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
113554927
NCBI-ProteinID:
XP_026814829
LinkDB
All DBs
Position
2:42228995..42241253
Genome browser
AA seq
1623 aa
AA seq
DB search
MASPSPNSMGPPGPNHQPPPPTQPQQHQQQQQQQQQQQQQQQQQQQQQPPQVQQQQPPTT
PQPLPPQNYSPGQPGAPASPNMQQGTQTFPPPGIQPSGPPQENLNALQRAIDSMEEKGLQ
EDPRYSQLLALRARQGNMDPNQRPPSSMQGNYPPQHPDKPPSPQQNSPNPNGPNGPVAQN
NLTPAQMQQLRVQIMAYRLLARQQPLTQQLAMAVQGKTSPQGYPPVPSAHHRQLEPGEIV
ESSMPMPSGGPMRLPMPMQNAPRQPNPPGPIPQSPVRMPQPGSTTQTQIQPPPNAQHPQG
PPPNQPPPVSMNGPQPPPSMAPGIPQASQQINAPQPVGQPPIGGVPPPMMGGPQQLAGIP
PHIPNMPTTNGPSPQQSLPQQQQQQQQPQPQPQQQQQQQQQQPPQQQQQTQGPPPPVKQN
RTTSCPKPVGLDPLIILQERENRLAARIAHRVQQLSNLPTTMSDDLRIKVEIELRALRVL
NFQRQLRAEVVACTRRDTTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKKRQ
KHQEYLSTILQHCKDLKEYHRNNIAKIGRLNKAVLNYHANAEREQKKEQERIEKERMRRL
MAEDEEGYRKLIDQKKDKRLAFLLSQTDEYIGNLTEMVKEHKLEQKRKQQEEQKKKKKSD
GPEDHDESSQQSDMHVSVYEPSTGRIFKGEEAPLASQLNSWLDAHPGWEVMEESDDEDDD
EQEDDESSNQKIKKNSFEKEIAEDKEPIKKTKMEDDEYKNASEEHTYYSIAHTIHESVTE
QASILVNGNLKEYQIKGLEWLVSLFNNNLNGILADEMGLGKTIQTIGLITHLMEKKKVNG
PFLIIVPLSTMSNWVLEFEKWSPSVFVVAYKGSPIMRRNLQTQMRSNKFNVLLTTYEYVI
KDKSVLAKLHWKYMIIDEGHRMKNHHCKLTQVLNTHYNAPHRLLLTGTPLQNKLPELWAL
LNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEV
ESQLPDKVEYIVKCDMSGLQRVLYKHMQSKGVLLTDGAEKGKQGKGGAKALMNTIVQLRK
LCNHPFMFQSIEEKYCEHIGTAGNVVQGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQ
MTQLMTIMEDYLGWRGFAYLRLDGTTKAEDRGDLLKKFNSAGSEYFLFLLSTRAGGLGLN
LQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNM
DEKVIQAGMFDQKSTGSERQQFLQSILHQDDGDDEEENEVPDDEVVNQMIARSVEEFESF
QKMDLERRREEAKFGPNRKSRLIEISELPEWLVKDEDEVERWTYEEDSEEIMGRGSRARK
EVDYTDSLTEKEWLKAIDENVDDFEDDEEEEIKSNRKGNRGKKRGKRNADDDDDPPIRRR
KTIGPEEIKLRKKMKTIMNIVVKYTDADSRILSEPFMKLPSRHKLPDYYEVIKKPMDIKK
IVAKIDDGKYADLNELEADFVQLCKNAQIYNEEASLIHEDSIVLQSVFTNSRQRLESTDI
PESGPEEGTKSEDEVSDADTTSSSMKLKLKMKPRGKGSEVRTSNRRKKKKHVSDDEDDED
SNL
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atggccagcccctcgccaaattcaatgggacccccggggcccaatcatcaaccgccgcct
ccgacacaacctcaacaacaccaacaacagcagcagcagcaacaacaacaacaacaacaa
cagcagcaacagcaacaacaacagccgccacaagtacaacagcaacagccacccaccact
cctcagccattgcctcctcaaaattattccccaggccagccgggtgctccggcatcgccc
aacatgcagcagggcacacaaacatttccacctccaggcattcaacccagtggaccacct
caagaaaatttaaatgcattgcaaagagcaatagattcaatggaagaaaaaggattgcaa
gaagaccccagatactctcaattattggcactacgagcaagacaaggtaatatggatcca
aatcaaagacctccttcttcaatgcaaggaaattatcctcctcaacatccagataaacca
ccttcgcctcaacaaaattccccaaatcctaatggaccaaatggaccagtagcccaaaac
aatttaactcccgcccaaatgcaacagcttagagttcagataatggcatatagactattg
gctcgacaacaacctttaacccaacaattagctatggctgttcaaggaaaaacttcaccc
caaggatatccaccggtgccttcagcacaccatcgacaactagaacctggagaaattgta
gaaagcagtatgccaatgccttcaggaggtcctatgagattaccaatgccaatgcaaaat
gctccaagacaacctaatcctcctggtccaattccacaatctcctgttcgaatgcctcag
cctggttctactacgcaaacacaaattcaacctcctccaaatgcccaacaccctcaaggc
ccaccaccaaaccaacctccacctgtatcaatgaatggacctcaaccacctcctagtatg
gctccaggaatacctcaagcttcacagcaaataaatgcccctcaacctgttggtcaacca
cctataggaggagtcccgccgcctatgatgggtggtccacaacaattggctggtataccg
ccacatatacccaacatgcctacaacaaatggaccatcaccacaacaatcattaccccaa
caacaacagcagcagcagcaaccacaaccacaacctcaacagcagcaacaacaacaacag
cagcagccccctcaacaacagcaacaaacacagggtcctcctcctccagttaaacaaaat
agaaccacatcatgccctaagcctgttggtttggatcctttaataatattacaagaacgt
gaaaaccgtttggctgcacgtattgctcatcgtgtacaacaattaagtaatctaccaaca
acaatgagtgatgatttacgaatcaaagtagaaattgaacttagagctttaagagtatta
aatttccaaagacaactaagagctgaagtagtcgcttgtactcgtcgggatactacttta
gaaactgctgttaatgtaaaagcatataaacgaacaaaaagacaaggtctacgagaagct
agagctacagaaaaattagaaaaacaacaaaaattggaagctgaaaggaagaaacgtcaa
aaacatcaagaatatctaagcactatattgcaacactgcaaagatctaaaagaatatcat
agaaataatattgcaaaaattggacgtctcaataaagctgttcttaattatcatgccaat
gctgaacgtgaacaaaagaaagaacaagaaagaattgagaaagagcgtatgagaagattg
atggctgaagatgaagaaggctatagaaaattgattgatcaaaagaaagataaacgttta
gctttcttactctcacaaactgacgagtatattggaaatctaacagagatggtaaaagaa
cataaattagaacagaagcgaaagcaacaagaagaacaaaaaaagaaaaagaagagtgat
gggcccgaagatcatgatgaaagttctcagcaatcagacatgcatgtttcagtatatgaa
ccttctacaggaagaatatttaaaggagaagaagctccacttgcgtcacaattgaacagt
tggttagatgcccatcctgggtgggaggtaatggaggaatctgatgacgaagatgatgat
gaacaagaagatgatgaatcaagcaatcaaaaaatcaaaaagaatagttttgaaaaagaa
attgctgaagataaagaaccaattaaaaaaaccaaaatggaagatgatgaatataaaaat
gcctcagaagaacatacttattatagtattgctcatactattcatgaaagtgttacggaa
caagcttccattttagttaatggcaatcttaaagaatatcaaataaagggtcttgaatgg
ttagtttcattatttaacaataatttaaatggaatacttgctgatgagatgggtttagga
aaaaccattcaaacaataggtcttattactcaccttatggaaaaaaagaaagtaaatgga
ccttttttgatcattgtgccattatctacaatgtcaaattgggtattggaatttgaaaaa
tggtctccttcagtctttgttgtagcttataaaggctctccaattatgcgacgaaattta
cagacacaaatgcgatctaataaatttaatgtcttactaactacatatgaatatgttata
aaagataaatcagttcttgctaaacttcattggaagtacatgattatagatgaaggtcat
cgcatgaaaaatcatcactgtaaattgactcaagtcttaaacactcattataatgctcca
caccgattattattaactggtacacctttacaaaataaactccctgaactttgggctctt
ctcaattttttgttgccatcaatatttaaatcatgttcaacatttgaacaatggtttaat
gcaccatttgctactactggagaaaaggttgaattaaatgaagaagaaactattttgatt
attcgtcgtcttcataaagtattacgtccattcttgttaaggcgtctgaaaaaagaagtt
gagtctcaattacctgataaagtagaatacattgtcaaatgtgatatgtctggtttgcaa
cgagtattgtacaaacatatgcaaagtaaaggtgtattacttactgatggtgccgaaaag
ggcaaacaaggtaaaggtggtgctaaagctctcatgaatactattgtacaattgcgtaaa
ctgtgcaatcatccatttatgttccaaagtattgaagaaaaatattgtgaacatattgga
actgctggaaatgttgttcaagggccagatttatacagagtttcaggaaaatttgagtta
ctggatcgaattttacccaaactgaaagctaccaatcatagagtattactgttttgtcaa
atgactcaacttatgaccattatggaagattatttagggtggcggggttttgcatactta
cgtttagatggtactactaaagctgaagatagaggagatcttttaaaaaagttcaatagt
gcaggcagtgaatatttcctatttttattaagtacaagagctggtggtcttggattaaat
ttacaagcggctgatactgttattatatttgattctgattggaatccacatcaagatttg
caagctcaagatcgtgctcatcgtattggtcaacaaaatgaagtacgagttcttcgttta
atgaccgtaaattcagttgaagagcgtatattagctgccgccagatacaaattaaatatg
gatgaaaaagttatccaagctggtatgtttgatcaaaaatcaactggatcagagcgtcaa
caatttttacaatctattctacatcaagatgatggagatgatgaagaagaaaatgaggta
cctgatgatgaagttgttaaccagatgatagctcgatcagtagaagaatttgaatcattc
caaaaaatggatcttgaacgtagaagagaagaagccaaatttggtccaaatagaaaatca
agattaattgaaatatcagaactaccagaatggcttgttaaggatgaagacgaggtggag
agatggacatatgaagaagattctgaagagattatgggacgtggttctcgtgctcgtaaa
gaagtagattacactgatagtttgactgaaaaagaatggttgaaggcaattgatgaaaat
gttgacgattttgaagatgatgaagaagaagaaataaaatcaaaccgtaaaggaaaccgt
ggtaaaaaaagagggaaaagaaatgcagatgatgatgatgatccaccaattagacggcga
aaaacaattggacctgaagaaataaaactacgaaaaaaaatgaaaactattatgaatatt
gtagtaaaatatacagatgctgattccagaatattgagtgagccatttatgaaactacct
tctagacacaaattacctgattactatgaagtaataaagaaacccatggatattaaaaaa
attgtggcaaaaattgatgacggaaagtatgcagatttaaatgaactagaagctgacttt
gtacagttatgtaagaatgcacagatatataatgaagaagcttcacttatacatgaagat
tcaatagttttacaatcagttttcacaaattctcgtcaacgattagaatcaactgatatt
ccagagtccggaccagaagaaggaacaaaaagtgaagacgaggtttcagatgctgatacc
acttcatcctcaatgaaattaaaattaaaaatgaaacctcgtggtaaaggttctgaagtt
agaacatctaaccgacgaaaaaaaaagaagcatgtgagtgacgatgaagatgatgaagat
tctaatttataa
DBGET
integrated database retrieval system
