Rhopalosiphum maidis (corn leaf aphid): 113554931
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Entry
113554931 CDS
T06065
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03013
Nucleocytoplasmic transport
rmd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113554931
09122 Translation
03013 Nucleocytoplasmic transport
113554931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113554931
03041 Spliceosome [BR:
rmd03041
]
113554931
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113554931
Spliceosome [BR:
rmd03041
]
Complex C
Other components
EJC/TREX
113554931
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113554931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
RMC1_N
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_EML
Tricorn_2nd
eIF2A
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
WD40_RFWD3
Peptidase_S9_N
Cytochrom_D1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SCAP
PD40
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_DCAF12
DPPIV_N
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
113554931
NCBI-ProteinID:
XP_026814832
LinkDB
All DBs
Position
2:complement(36159165..36164383)
Genome browser
AA seq
325 aa
AA seq
DB search
MSYWKNFDVNVNELKDYFKTHKSVKEFQAHSSKVHSVGWSCDGKRLASCSFDKSVATFTL
DKDRLNKEYTYKGHSGSVDQLCWHKFNPDLLSTASGDKTVKVWDVRHQKCSNTILTKGEN
INITWSPDGHTIAVGNKEDLITFIDMRTLKPISEQQFNFEVNEMSWNNESDLFFLTNGLG
CVYVLSFPDLVQRHVVKAHPGTCICIEFAPSGHYFAVGSADASVSLWDLENLACVQTYTR
LDWPVRALSFSYDGKMLASGSEDLYVDIADVTTGEKITDIPIEAATFTVAWHPKQYLLAF
ACDDKEQFDRKKDTGNLKVFGFSSE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagttattggaaaaattttgacgttaatgtgaatgaattaaaagattacttcaaaaca
cataagtctgtcaaagaatttcaagcgcattcgtcaaaagtacattcagttggttggagt
tgtgacggcaaacgtttagcctcttgttcatttgataaatctgtggctacattcacattg
gataaagaccgtttgaacaaggaatacacatataaaggacacagtggtagtgtggatcag
ttatgttggcataagtttaacccagatttactgagtacagctagtggtgacaaaacagtc
aaagtatgggatgtgagacaccagaaatgttcaaatactattttgaccaaaggagagaat
attaacatcacatggtctcctgatggacacacaattgctgttggaaacaaagaagatttg
ataactttcattgatatgcgcacccttaaaccaatcagtgagcaacagttcaattttgaa
gtgaacgaaatgtcatggaacaatgaaagtgatttgtttttcttaacgaacggtttagga
tgtgtctatgtgctaagttttccagacttagttcaacggcatgtggtaaaagctcatcca
ggtacatgtatttgtatagaatttgcgccaagtggccattattttgctgtaggttcggca
gatgcttctgtgtcattatgggaccttgagaatttggcttgtgtacagacttacactaga
ttggattggccagttcgagctttaagtttttcgtatgatggtaaaatgttagcatcaggt
agtgaagatttgtatgtggacattgcagatgttactacaggagaaaagataactgatata
ccaattgaagcagcaacattcactgtggcatggcatccaaaacagtatttattggcattt
gcatgtgatgataaagaacaatttgataggaaaaaagatactggaaatcttaaagtattt
ggatttagttctgaataa
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