Rhopalosiphum maidis (corn leaf aphid): 113554967
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Entry
113554967 CDS
T06065
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmd04131
]
113554967
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmd04147
]
113554967
Membrane trafficking [BR:
rmd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
113554967
Exosome [BR:
rmd04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113554967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
HEAT
Cnd1
ARM_LIN_2nd
Motif
Other DBs
NCBI-GeneID:
113554967
NCBI-ProteinID:
XP_026814952
LinkDB
All DBs
Position
2:85861791..85868839
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AA seq
960 aa
AA seq
DB search
MSTIEQPCYTLINISSDYEMPNEMQLKSDLEKGDSKTKIEALKKVIHMIANGERLPGLLM
IIIRFVLPLQDHTIKKLLLIFWEIVPKTTADGKLLQEMILVCDAYRKDLQHPNEYLRGST
LRFLCKLKEPELLEPLMPTIRSCLEHRHSYVRRNAVLAIFTIYRNFEFLIPDAPELIANF
LDGEQDMSCKRNAFMMLLHADQDRALTYLASCLDQVASFGDILQLVIVELIYKVCHANPS
ERSRFIRCIYNLLNSSSPAVRYEAAGTLVTLSNAPTAVKAAASCYIELIVKESDNNVKLI
VLDRLIALKEHPSHERVLQDLVMDILRVLSSTDLEVRKKTLNLAMDLVSSRNIEEMVFVL
KNEVEKTHNLAEHEDTGKYRQLLVRTLHTCSIKFPDIAATVIPVLIEFLSDSIELAATDV
MVFLREAIYLFESLRPLIIQRLLEVFQSIKSANVHRAALWILGEFANSQEDIEATIEQIK
TSLGDMPLVEDELKKAAGDSENVEEFGSSGSQLVTSDGTYATQSAFIINTPRSGQAKRPP
LRQYLIDGDFYVGAALGTTFTKLGIRYAEIWEEQDSIKANQFCVKLMLILTYILKLGKSG
ICSKPIGIDDGDKIMESIKILNDRDSEIEEIYTKECSKSLNEMLAAKEDEESSNKKAKEK
PGHKVNVDDAIVFLRTTSNGTEGTENVFELSLNQAVAGGGSIHQNSGDGASGLSTNSKLN
KVTQLTGFSDPVYAEAYVHVNQYDIVLDVLIVNQTGDTLQNCTLELATMGDLKLVEKPQP
VVLAPHDFCNIKASVKVASTENGIIFGNIVYDIGGAIGDRNVVVLDDIRIDIMDYIMPAV
CNDSEFRQMWTEFEWENKVSVSTSLTDLNEYLAHLLKSTNMKCLTPEKALSGQCGFMAAN
LYARSIFGEDALANLSIEKGLDKPQVIGHIRIRAKSQGMALSLGDKINMMQKRPYKAVAA
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactatagaacagccttgctatactttgatcaatatctctagtgactatgagatg
ccaaacgaaatgcaactcaagtcagatcttgaaaaaggtgatagcaaaacaaaaatcgaa
gcattgaaaaaagtcattcatatgatagccaatggagaacgtttgccaggattgttgatg
ataattatccgttttgtcctaccattacaagatcatacaattaaaaaactgcttttaata
ttttgggaaatagtaccgaaaactacagctgatggaaaattattacaggaaatgatattg
gtctgtgatgcatatcgtaaggatttacaacatcctaacgaatacttgagagggtcaact
cttcgttttttgtgtaaattgaaagaaccagaattattagaaccactgatgcctactata
cgttcatgtcttgaacaccgtcattcatatgtaagacgtaatgctgtacttgcaatattc
actatttataggaattttgaatttctgataccggatgctcctgaacttatcgctaatttt
cttgacggagaacaagacatgtcttgcaaacgtaatgcttttatgatgttactacacgct
gatcaagacagagcacttacatatctggcttcttgtctggatcaagtagcttcttttggt
gacattttgcaactagttattgtagaactcatttataaagtgtgtcatgcaaatccatca
gaacgatcccgtttcatacgttgtatttataatttattgaattctagtagtccagctgtt
cgttatgaagctgctggaacattggtcaccttatcaaatgcacctactgcagtaaaggca
gcagcttcttgttatattgaattgattgtcaaagaaagtgataacaatgtaaaactcatt
gtattggaccgtttaattgctcttaaagaacacccttcacatgaaagagtacttcaggac
ttggtcatggatattctaagagtattatctagcactgatttggaagttagaaagaaaaca
ttgaatttggctatggatttggtatcatctcgcaatatcgaggaaatggtgttcgtgctt
aaaaacgaagtggaaaaaacccataatttagctgaacacgaagatactggaaagtataga
caattgttggtgcgcacactccatacatgctctattaagttcccagatatagctgcaaca
gtgatacctgtactcattgaattcttgtcagatagtatagaattggctgccacggatgtt
atggtattcttgcgtgaagctatttacctctttgagtcattacgtcctctcataattcag
cgtctattagaagttttccaatctattaagtctgccaatgtacacagagctgcattatgg
atacttggtgaatttgccaactcacaagaagatatcgaagcaacaattgaacaaataaaa
acatcacttggagacatgcctttagttgaagatgagttaaagaaagcagctggagattca
gaaaacgttgaagaatttgggtctagcggttcacagttagttacatctgatggaacatat
gctactcaatcagcattcattataaatactcctcgtagtggtcaagcaaaacggccacca
ttgcgtcagtatctaattgatggagatttctatgtaggtgctgcattaggcactacattc
actaaattgggcatcagatatgctgaaatctgggaagaacaagattctataaaagctaat
caattttgtgtcaaactaatgttaatattaacttatattttgaagcttggaaaatcggga
atttgttctaaaccaattggcattgacgatggagacaaaattatggagagtattaaaata
ttaaatgatagagatagcgaaatcgaagaaatttataccaaggagtgcagcaaatcatta
aatgaaatgttggctgctaaagaagatgaagaaagcagcaataaaaaagctaaagaaaaa
ccaggacataaagtaaatgtcgatgatgctattgtgttcttacgtaccactagtaatggc
acagaaggtacagaaaatgtttttgaacttagtttaaatcaagccgttgctggtggtgga
tctattcaccagaatagtggtgatggtgcatcaggactttctaccaatagtaaacttaat
aaagttacacaactgactggattttctgatccggtgtatgctgaggcttatgttcatgtc
aatcagtatgatattgttttagacgtattgattgtaaatcaaacaggtgacacattgcaa
aattgtacgctggaattggccacaatgggagatctaaaattggtcgaaaaaccacaacct
gttgttttggctcctcatgatttctgtaatattaaagctagtgttaaagttgcatctact
gaaaatggcataatctttggaaatattgtctatgatatcggtggtgcaattggtgatcga
aatgtggttgtattagatgacatccgtatagacataatggactacataatgcctgctgta
tgtaacgactctgagttccgtcaaatgtggactgaatttgaatgggaaaacaaagtttct
gtttccactagtttgaccgatcttaatgaatatttggcacatttattgaagagcactaat
atgaaatgcttaactccagaaaaagcattatcagggcagtgtggatttatggctgcaaat
ttatatgcaagatcaatatttggcgaagatgctttggctaatttaagtattgaaaaggga
ttagataagccacaagttattggtcatattagaattcgggctaaaagtcagggaatggca
ctcagtcttggcgacaaaataaatatgatgcaaaaacgaccatacaaagcagttgcggct
taa
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