Rhopalosiphum maidis (corn leaf aphid): 113554975
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Entry
113554975 CDS
T06065
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113554975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113554975
03009 Ribosome biogenesis [BR:
rmd03009
]
113554975
Enzymes [BR:
rmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113554975
Spliceosome [BR:
rmd03041
]
Complex A
U1 snRNP components
U1 related factors
113554975
Complex B
113554975
Ribosome biogenesis [BR:
rmd03009
]
Eukaryotic type
Pre-60S particles
Helicases
113554975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Imm64
Motif
Other DBs
NCBI-GeneID:
113554975
NCBI-ProteinID:
XP_026815011
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All DBs
Position
2:88419190..88424248
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AA seq
550 aa
AA seq
DB search
MFAQGLRVVRSAILNPLHIKSLSNRQQLLTEKITIMSYARNGTGGGRSNGSYGGQRSSYG
GGGGGGRGGMGGAKKNPGANLQAPNWDRVQLRPFKKEFYVPHPTIERRSYEEVDKYRTGK
DITVMSSDRSPVPYPIQHFKEANFPDYVMTVIRNEGFTEPTPIQAQGWPIAMSGKDMVGV
AQTGSGKTLGYTLPAVVHINNQEPLKKGDGPIALVLAPTRELAQQIQKVAGLFNQSTYLR
STCIYGGAPKSHQARDLMNGVEIVIATPGRLLDFLESRATNLQRCTYLVLDEADRMLDMG
FEPQIRKIIQQIRPDRQVLMWSATWPKEVQKLANDFLSDYIQLNVGSLTLSANHNILQNV
DVCQEHEKEDKLMDLLQDIANMEENKTIIFAETKRKVDTITRKITNMGARAVGIHGDKSQ
SERDHVLKQFRNGRANILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSSQ
KGTSYAFFTHSNSKQAKDLVAVLTEANQRIDPKLAAMAARSFPSGGNKWYGGGGGGNRSW
GGGRPAHRKF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcaaggattgagagtcgtcaggtccgccatattgaatccgctacacatcaaa
tctttatcgaatcgtcaacagttgcttacagaaaaaataacaattatgtcttatgcaaga
aatggtacaggtggaggaagaagtaatggttcttatggaggccaaagatcatcatatggt
ggtggtggtggtggtggtcgtggtggaatgggtggtgccaagaaaaaccctggtgccaat
ttacaagcccccaactgggaccgtgtccaactaagaccatttaagaaagagttttatgtt
cctcatccaactattgaaagaagatcttatgaagaagttgacaaatacagaactggaaag
gatattactgtaatgagctcagacaggagccctgttccatatccaattcaacattttaaa
gaagcaaattttcccgactatgttatgacagttatacgcaatgaaggttttactgaacct
actcctattcaagcacaaggttggcctattgcaatgagtggaaaagatatggttggagta
gcccaaactggttctggaaaaactctaggttatacattgcctgctgtagtacacataaat
aatcaagagccattgaaaaagggtgatggccctattgctttagttttggctccaactaga
gagttagcccagcaaatacaaaaagttgctggattattcaatcagtccacatatttacgg
tcaacatgtatttatggtggtgctccaaaatcacatcaggctagagatttaatgaatggt
gttgagattgttattgctacaccaggtcgtctattagatttcttagaatctcgtgctacc
aatttgcaacgttgtacctatttagtattggatgaagctgaccgtatgcttgacatgggt
tttgaacctcaaattagaaaaatcattcaacaaattcgtcctgatagacaagttttgatg
tggtcagccacatggcctaaagaagttcaaaagttagccaatgatttcttgagtgattac
attcaattgaatgttggttctttgactttatctgccaatcacaatatcttacaaaatgtg
gacgtatgtcaagaacatgaaaaagaagacaaattgatggatctattgcaggacattgct
aatatggaagaaaataaaactattatttttgcagaaaccaagcgcaaggttgatacaatc
acacgtaaaataaccaatatgggggcaagagctgttggaattcatggagacaaatcacaa
tccgagcgtgaccatgtattaaaacaattcagaaatggaagagctaatattttggttgct
actgatgttgctgccagaggtttagatgtcgatgatgtcaaatttgttatcaattttgat
taccccaacaattcagaagattatattcacagaataggccgaactggacggtcatctcag
aaaggtacctcatatgcattctttacccattccaatagtaagcaagctaaagacctcgtg
gctgttcttactgaagccaatcaacgtattgaccccaaattagctgccatggctgcacgt
tctttcccgagtggtggtaacaaatggtacggcggcggtggtggtggaaacagatcttgg
ggaggtggaagaccagcccacagaaaattttaa
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