Rhopalosiphum maidis (corn leaf aphid): 113555015
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Entry
113555015 CDS
T06065
Name
(RefSeq) pumilio homolog 2 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
DUF5052
Motif
Other DBs
NCBI-GeneID:
113555015
NCBI-ProteinID:
XP_026815076
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Position
2:complement(24751302..24849793)
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AA seq
1192 aa
AA seq
DB search
MKWLGAGNVPVSSTNNTVLNNSGNHLQEHQQQLNENEPSGDSVLRQTVQEEPIVNYVFDC
ASGESQEYGLQSAPLPSKLPQPRWPATSEDCFLEQMQEKWKYFSAKMSQPPPQISEVPNV
QYQLQPILVKSGEGGAEQYVYGAPPGLHPYQQHMADLANSSMAHNSAHAIMSTQQHTMDL
HMRNGEIASSTKKLWGVEEGKEDGPKGILNLNDHHHQMWRDSTWSSNTRRGAGFPVGNDS
GNILSPRSSEAGIGMKMVEYVLASTPNKMEPLEPRMRNLVISSNDGETIKKDKEKPPGSP
YDSVNSNKKEMENGNCSTVVQQNGMVVVQNGLDEDKYINRQASPCEEEINKNAMNAVSNN
QVANANSNNVVVIDSLHGALHQGQLMNHHHHGMTMPLHQQFQVQGDPQQLDLNSYHATNA
QQQQGAIDSQGNVMTPFDIQQLFRNHQAQQAAAAAAAAANPAAAAAVAAQQLQLIQQQQQ
QQFHLQQQQQLAAAAAGLAAAASAPTATPVAAAAAAATFAPPGTTATTPYIINPQEPYMI
AGFMGSGPTVVPQYYGVPWGMYPAGSIIQPAGAAGQPGAAANGTNTAQQQRRPMSPSQGD
GTQYQVIPAFYDQNGSLVMTRNGGQLRLVSPASVIVNAQQGLQPQPQQAVGSAANNYSTN
LTSLTSSLSSLGVSAAGVHDVNVSLGLGSGNAGRRDSFDRNTSAFSPSMDYARHKWPQYN
TLASQSPLGLASGSLTPPPAMGSASNLQMGLMGSANNANRGLMNAAPGAEAMSKFRASDY
AMGGLAANGAMFSTAANPNNTNSLFNKMGGVRGSASSLGGSSITLDSKPSGRSRLLEDFR
NNRYPSLQLRDLTNHIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVF
GNYVIQKFFEFGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVREL
DGHVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHC
TSEQTAPILDEMHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKLICSVRGKVLTLSQHKF
ASNVVEKCVTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKMLDVCESSQRKVL
MHKIRPHFASLRKYTYGKHIISKLEKYFMKSNQQSVPVSELGPIGPPTNGVL
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggttaggcgcagggaatgtacctgtttccagcacaaataatacagtgttgaat
aacagtggtaatcatttgcaggagcatcaacaacagttaaatgaaaatgaaccaagtgga
gatagtgtattacgacaaacagtacaagaagagccaattgtcaattatgtatttgattgt
gcatcaggtgaatcacaagaatatggtttacaatctgccccattaccatccaaactccca
caacctagatggccagcaacatctgaggactgttttttagagcaaatgcaggagaaatgg
aaatatttctctgcgaaaatgtctcaacctccacctcagatatctgaagtaccaaatgta
caatatcaattacaaccaatattagttaaatctggagaaggtggcgcggaacagtatgtt
tatggagcacccccaggactgcatccctatcagcaacatatggcagatttagcaaactca
tcaatggctcataattcagctcatgctattatgtcaacacaacaacatactatggattta
cacatgagaaatggagaaattgcatcctcaacaaaaaagttatggggagttgaagaaggc
aaagaagatggacctaaaggcatacttaatttaaatgatcatcatcaccaaatgtggaga
gattctacttggagttctaatacaaggagaggtgctggttttccagtgggaaatgattct
ggcaatatattatccccaagatcatcagaggctggaattggcatgaagatggttgaatat
gttttagctagtacaccaaataaaatggagcccttagagcctagaatgagaaatttagtt
attagttctaatgatggcgaaactataaagaaagataaagaaaaaccacctggttctccc
tatgattctgtaaatagtaataaaaaagaaatggaaaatggaaattgttcgactgttgtt
caacaaaatggaatggtagttgttcaaaatggcttagatgaagataaatatatcaaccgt
caagcatcaccatgtgaagaggaaatcaacaaaaatgcaatgaatgcagtttcaaataat
caagtagctaatgctaattccaataatgtagtggtgattgacagtttgcatggtgcacta
caccaaggacaactaatgaatcatcatcaccatggtatgactatgcctttacatcaacaa
ttccaagtacaaggcgatccacaacaattggatctcaattcataccatgccaccaatgct
caacaacaacaaggcgctattgactcccagggaaatgtcatgactccgtttgacatacag
cagctgttccgcaaccatcaagcacagcaagcagcagcggcggctgccgcggcagcaaac
ccggccgcagcggctgcggtagcggcccaacaactgcaactcatccaacaacagcagcag
caacaattccacctgcagcagcagcaacagctagccgcggcggccgctggactggcagcc
gctgcatcggcaccgactgcgacgcctgtcgccgctgccgcggccgcggccacgttcgcg
ccaccaggcacgacggccacaacgccgtacatcatcaacccacaagaaccttacatgatt
gccggctttatgggctcaggtccgacagtggtgccgcaatactacggcgtgccgtggggc
atgtatccggcgggcagcatcatacagccggccggtgccgccggtcaacccggcgccgcg
gccaacggcaccaacacggctcagcaacagcgcaggccaatgagcccgtcgcagggtgac
ggcacccaataccaggtcataccggcgttctacgaccaaaacggatcgctggtgatgacc
cgcaacggcggtcaactccggctcgtgtccccggcatcggtcatcgtcaacgcccaacaa
ggactccaaccacagcctcagcaggcggtcggttcggcagccaacaactattcgaccaac
ttgacctcactgacatccagcctttcgtcgctgggggtcagcgcagcaggcgtacacgat
gtcaacgtcagtcttggtcttggttctggaaatgccggcagacgcgattcctttgaccgt
aacacgtccgctttttcaccgtccatggattacgcccgtcataagtggccgcagtacaac
acactggcgtcccaaagccctttgggtctcgcctcgggatctctaactcctccaccagct
atgggctcagcgtccaatttacaaatgggcctcatgggttcggccaataacgccaacaga
ggtcttatgaacgctgcgccgggtgcagaagccatgtccaagtttagagctagtgattac
gctatgggtggtctagcggctaacggagccatgtttagcacagctgcaaatccgaacaat
acgaattccttgttcaacaaaatgggtggcgttcgtggcagcgcttcttcgttgggtggt
tcctccataacgttggactcaaaaccgtccggccgtagcaggctcctggaagacttcagg
aacaatcgttaccccagtcttcaactacgagacctcaccaatcatattgtcgagttttcc
caagatcaacatggctccagatttatacaacaaaagttggagagggcttccacgcccgag
aagcagctagtgttctctgagatattggcggctgcgtacagcttaatgactgatgtgttt
ggcaactatgttattcaaaagttcttcgagtttggaacacctgaacagaaatctacattg
gcacagaaggtacgtggacatgtattaccattggcgttgcaaatgtacgggtgcagggtt
atccagaaggcattggaaagcgtgggtggagaacaacaagtggaaatagtacgtgagcta
gacggccatgtcctaaaatgtgttaaagaccaaaacggtaatcatgtagtccaaaagtgc
atagagtgcgttgatccacatgctcttcaattcatcatcaatgctttccaaggacaagtt
ttaacattatcaacacacccatacggatgcagagtcattcagcgtatactggaacattgt
acatctgaacagacagcaccgatactcgacgaaatgcatcaacacgttgaacaattgata
caagaccaatatggaaactatgtaattcaacatgtattggaacacggtaaacaagaggac
aaatctaaattaatatgctctgttcgcggaaaggtgttgacactatcccagcataagttt
gcatcgaatgtcgtggagaaatgtgtaacacatgctacacgcagtgaacgttctatgctt
atagaagaagtttgcggtttcaatgacaacgctttacatgtaatgatgaaagaccaatat
gccaattatgtagtgcaaaaaatgttagatgtatgcgaatcttctcaacgtaaggtgctc
atgcacaaaatccgtcctcattttgcatcactgcgcaagtacacatatggcaagcacatt
atttctaaattggaaaagtacttcatgaagagcaaccaacaatcagtgcctgtatctgaa
ttgggacctattggaccaccaacaaacggagtgctttaa
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