Rhopalosiphum maidis (corn leaf aphid): 113555092
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Entry
113555092 CDS
T06065
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113555092
03012 Translation factors [BR:
rmd03012
]
113555092
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113555092
Translation factors [BR:
rmd03012
]
Eukaryotic type
Initiation factors
eIF-3
113555092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
RRM_1
WD40_CDC20-Fz
Beta-prop_WDR19_1st
Beta-prop_ELP1_1st
Beta-prop_RIG_2nd
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
113555092
NCBI-ProteinID:
XP_026815222
LinkDB
All DBs
Position
2:91461558..91466655
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AA seq
687 aa
AA seq
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MAKKKDSEKHEDGQRGKYNKDDADANELENFVDDITDEELLGDVLQKRPKVSDGVDTVII
VDGVPQVNPERFEKLKIVITKIFAQFGKILNDYYPKSENGHTKGYIFIEYEKHESALEAV
TQANNYKLDKQHTFLINLFSDYKKYNDIPEKWEAPTLQPFPERPNLQYFLSEPDAFDQYY
VYNINNHIEVWLNSNPQPXKLVEREKWTESLIMWSPLGTYLATLHKQGVVLWGGPNFTNV
LKLSHRNVQFVDFSPCEQYLVAYAPLDNGEQKLTIFDIRTGAEKRSFISDAPMAGNVLRW
SKDDKYXARIGHNTLSVYETPSFGLLDKKSITVNGIRDFSWSPRDNVLAYWVAEDKDVPA
RVVLLEIPSRKEIRANNLFNVADCKIHWQKAGDYLCVKVDRYAKIKREKGDVKYSGMYFN
FEIFHMREKNIPVDSVEIKEPIHAFAWEPIGSKFAIIHGEPSNNSVSFYNVKSGQAPVLL
KKLDKHFCSHLFWSPAGQYIVIAEIRDSGALEFVDTADFTTMCSTEHYKATDIEWDPTGR
FVATGVSSWKTKGDTGYWIWSFQGRILNRFNTNTYCHMQWRPRPPTLLSAKQQKDTKKSL
KKYTSQFETKDKMRMTKASKEVIDKRRKLIXEFEEYRSKRLDDWNKQKAERMAIRSHIDT
DELDSDDKNVQVEKVEFLVKEEVTVID
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaaaaagattccgagaaacacgaagatggtcaaagaggaaaatacaataag
gacgatgctgacgccaatgaattagaaaacttcgtcgacgatataactgatgaagagttg
ctcggtgatgttctgcagaagagacccaaagtatctgatggcgtagacaccgttattata
gttgacggagttccccaagtcaaccctgagcgctttgaaaaacttaaaatagttattacc
aaaatattcgctcaatttggtaaaattctcaacgattactatccaaaatcagagaacggt
cacactaaaggctatatatttatcgaatacgaaaaacacgaaagcgcattagaagctgtt
acacaagctaataattacaagctagataaacagcatacttttttaataaacttattttct
gactacaaaaaatacaatgacattcctgaaaaatgggaagctcctactctacagccattc
ccagaaaggcctaatctgcaatatttcttaagcgaacctgatgcatttgatcaatattat
gtttataacataaacaatcatattgaagtttggttgaatagcaatccacaaccanacaaa
ttagttgaacgtgaaaaatggactgaatctctaattatgtggtcacctcttgggacatat
ttggcaacactacacaagcaaggtgttgtactttggggaggacctaacttcactaatgtt
ttgaagctttctcatcgcaacgttcaatttgttgatttttctccttgtgaacaatattta
gtggcatatgctccattagataatggtgaacaaaagttaaccatttttgatattcgtact
ggcgccgaaaagcgatcttttatttcagatgctccaatggctggtaatgtattaaggtgg
tcaaaggatgacaaatatnttgctcggattgggcataacactttaagtgtatatgaaact
ccatcttttggtttgttggataaaaaaagtataactgttaatggtattcgagattttagt
tggtctccaagggataatgtacttgcttattgggttgctgaagataaagatgtaccggct
cgagtagttctgttagaaataccaagccgcaaagaaattcgagcaaataatttatttaat
gtagcagactgtaaaatccattggcaaaaagctggtgactacttatgtgttaaagttgac
cgttatgctaagattaaacgtgaaaaaggagatgtaaaatacagtggtatgtatttcaat
tttgaaatatttcatatgagagagaaaaatatacctgtagacagtgttgaaattaaagaa
ccaattcatgcatttgcttgggaaccaattggttcaaagtttgcaattattcatggtgaa
cctagcaataatagtgtaagcttttataatgtgaaatctggccaagctccagtattattg
aaaaagttggacaaacatttctgtagtcatttgttttggtcacctgctggacagtatatt
gttattgctgaaattcgggattctggtgctttggaatttgttgacactgcagacttcacc
acaatgtgttctacagagcattataaagcaaccgatattgaatgggatccaactggaaga
tttgttgcaactggtgttagttcatggaaaactaagggagatacaggttattggatatgg
tcattccaaggaagaatattgaatagattcaatacaaatacctattgtcacatgcaatgg
agaccaaggccccctactctgttgagcgctaaacaacaaaaggataccaaaaaaagtttg
aaaaaatacacatctcagtttgagacgaaggacaaaatgcgaatgaccaaagcctctaaa
gaagtcattgataaacgtcgaaaattgatttaagaatttgaagaataccgcagcaaacgt
ttagatgattggaataaacaaaaggctgaaagaatggctattagaagtcatattgatact
gatgaactagattcagatgataagaacgtgcaagtagaaaaagttgaatttttggttaaa
gaagaagtaactgtaattgattaa
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