Rhopalosiphum maidis (corn leaf aphid): 113555171
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Entry
113555171 CDS
T06065
Name
(RefSeq) trithorax group protein osa-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113555171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmd03000
]
113555171
03021 Transcription machinery [BR:
rmd03021
]
113555171
03036 Chromosome and associated proteins [BR:
rmd03036
]
113555171
Transcription factors [BR:
rmd03000
]
Eukaryotic type
Helix-turn-helix
ARID
113555171
Transcription machinery [BR:
rmd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113555171
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113555171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
113555171
NCBI-ProteinID:
XP_026815324
LinkDB
All DBs
Position
1:90322171..90354780
Genome browser
AA seq
2026 aa
AA seq
DB search
MAATHAENQPGGDVNNRDQDRPLDVPGFQNGSHERRAPMSGSGLMAPESPKGKQQQQQQQ
VPTNHHNYDGMSSGNGGGPLYGRPEHGDQPTSDGDMPKTNNFEQTPPDKDGYPPPPPGGY
RNSFSHHQPPPEQHHANSNTEPNSFSQFRHAYPKPMMRVPGPPGAMFPQRQYLSGQSISQ
PTGPTPTLNQLLQSSNPATRYQNNYGNEYPKPDGSQPPPVQNQQQQHYNQNWPPPRHNMP
PFPPQHGMPYRNMPPSANPRGPTPPPSPGHQTHYPPPPSSPTGYQQHHRVPPLHHQYPPG
PPSQQQQQQQQSQQPPPHQQVPYGSYPNQQPPVDRQQQQPPQLPPQPPQQPHTGLGQTTS
SPASASPPALPPVSQGQNAQQHSSPTPPPQPQQQQPPHQSPPQVHPDLTSQNSNDSNCGA
GAGNGGTPLRPSPSPTGSTGSRSMSPAVTAPPGGGPPQQQQQQNIPMPPRPPSSQQQPDP
GQATQNNRMSHSPMGPQQGYQQQPSPQPPGGMPHMTGPSSGAPVQNPYKMPGPNPYGPPP
PVSSHSGYPSQQQSAPPMGSYPQQPPGNYGARPPGIPYQGYPPPNSNGPPQQYSPRGMPM
HHGPPHQFPPYQGWPGSGPPQAPPPLNNSHHSGPVQPPTPTKVPPPSSSPQQQQQQQQQQ
QQQQQQSPQSQPQQHQQPPIQHPPPAQSPLHHHHPHHPPPPGPHMHPHAHQMHSMQQGTS
PGPPPPVSPGPRPHTPPHPHYLKQHLQQQHKGPGGYQTSGPIPPNSGPGNYLNSMPPHSM
GPPAPVQSNTGPQMAPPNPSMMSVDHEVSQQQQSLSGVVTSVVTTGPDGTAIDDASQQST
LSNASAASGDDSNCTTPKRKENMSGGMMYQQGMGGIMGPPCSPAHDEYSNPDPMAPAWPR
GPPSHNPVFNSHIAPQNEHVYRPKKHDSLSKLYEMDDNPERRIWLDKLLHFMEERGTPIS
TCPTISKNPLDLFRLYIYVKERGGFMEVCKVTKNKIWKDVAGLLGIGASSSAAYTLRKHY
TKNLLPYECHFDRGGIDPIPIINQVESSSKKKSSKATSVPSPGSAGSNSQDSLPSAPTAP
GPGHVDGYPGYGGYSGPQDYNSPQRPPHPPHGTQGSYQGQGGYNQQYPGSNDQYGQHYPP
VSTPVGYPSGPVRPPLYPPYSNDADRNYGGSVPPPQGPPNTPQGPGNGQDPYGRGPVPPP
SGYQQPPRFPGPPPPQNSSPATVNQTQGGSVSTPGYPPSQQPQPDYYRQEPPASPGYPPT
SAPGTYPGKGMPPPQPRRHPDFAKDQQAGPPQPAGYPGYGPQQRPMYPGWTGTPNAASNQ
YPRPGYPPGSQPPQNWSQGPPRSMPPSHPGQPPQWEQHRYPPQGQPYGAQQNHWGPMAQA
QMRMPRHGYRPDGSKPYGPHGPMAPPPHMKPGMPGQPMFQGSSLLKREVIFPPDSIEAVT
PILYKRRRMMRHDVAPVDAWRLMMSLRSGLLAESTWALDVLNILLFDDVSIPFFGLTHMP
GLLDVLLEHFRQSLVDMLDTDIKSYCWYEKSKVIEDIPDVGAVDNVNPNEKAYFPDPTFP
NQRPIKNSAIIDGSKELFIKNGKRSWDVIDNYDMGYNIAETDTSFLVPCFRSEFGLVPFV
KLLKSDKPKTEILDDKACIKKELDDKELVQNSIDTIVNIKNINVRDPMGVLKRKCITDYE
DESFSKDESSLSLISESQDSIGKRCVCISNILRNLSFVPGNELEFAKSGPFLGLVGKLLL
THHEHPLRSSKTRNYDKADDDTESLFNCTTTTDADTIEPGNDAKWWWDYLDVVRENLLVS
LANIAGYVDLSTFNEDISRPILDGLLHWAICPAAAGQDPFPSAPLSPQRLALECLCKLCV
TDNNVDLVIATPPYSRLEKLANVLTRLLCRTEEQVLREFAVNLLHYLAAADSGMARTIAL
QSPCVSLLVAFIEQTEQNALSVVNTHGLNALRDNPDSMGTSLDMLRRAARILLLLSRHPD
NRPLFLQQEQRLLSLVMSQILDQQVAALISRVLFQCSRNTPSPLAQ
NT seq
6081 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacgcacgctgaaaaccagccgggcggcgacgtgaacaatcgcgaccaagat
aggccgctggacgtgcccggtttccagaacggcagccacgagcgcagggcgccaatgagc
ggcagcggcctgatggcgccggaatcgccgaaaggtaagcagcaacaacaacagcagcag
gtgccgaccaaccaccacaattacgatggaatgagcagtggcaatggtggtggaccgctg
tacggccggccggagcacggtgaccagccgactagtgatggtgacatgcctaaaactaat
aatttcgaacaaacgccgcctgacaaggatggctatccgccacctcctcctggtggctat
cgcaacagttttagtcatcatcagccacctcctgaacagcaccatgccaatagcaatacc
gaacctaacagttttagtcagttcaggcatgcttaccccaaaccaatgatgcgggtgcct
ggaccgccgggagctatgtttccccagcggcaatacttgtctggccagagtatatctcag
ccgacaggacctacacccacgctcaatcagctgctgcagtcgtcaaatccggcgacacga
tatcaaaataattacggcaatgaatatcccaaacctgatggttctcaaccgccgccggtt
caaaaccaacaacagcaacattacaaccaaaattggccaccaccaagacataacatgcca
ccttttcctcctcaacacggcatgccttatagaaatatgccaccatcggcgaatcccaga
ggaccgacgcctccgccgtcgcctggccatcagactcattatccaccaccgccgtcttca
cccaccggataccaacagcaccatcgggtaccgcctttacaccatcagtatccaccgggg
ccaccgtcgcagcagcagcagcagcagcagcaatcgcagcagccaccacctcatcaacag
gtaccttatggcagctacccgaaccagcaaccgccggtcgatcgtcagcagcagcagccg
ccccaacttcctccacaaccgcctcaacaaccccacactggtctggggcagaccacgtcg
tcgccggcgtcggcgagcccgcccgctttgccacccgtgtcgcagggccaaaatgcccag
caacactcgtcgccgacgccgccgccacagcctcagcagcagcagccacctcatcagtca
ccgccgcaggtacatccggatttgacaagtcaaaacagtaacgatagtaattgtggtgct
ggtgctggcaatggtgggactcctctgcggccgtcgccgtctcctacaggatctactggt
tcgcgttccatgtcgcctgctgtcacagcaccgccgggtggtggaccgcctcaacaacaa
cagcaacagaacattccaatgccgcctaggccaccaagcagtcagcagcagcctgatcca
gggcaagctactcaaaataatagaatgagccattcgcctatggggccacaacaaggatat
caacaacaaccgtctccacaacctccaggtggaatgcctcatatgacaggtccttcatcc
ggagcaccagtacaaaatccgtacaaaatgcctggaccgaatccttatggccctcctccg
cctgtatcttcacatagtggttatccttcacaacaacagtctgctccgcctatgggatca
taccctcaacaacctcctggtaattacggtgctagacctcctggtataccttatcaaggg
tatccaccacctaatagtaatggtcctccacaacaatactctcctagaggtatgccaatg
catcatggaccccctcatcaatttcctccttatcaaggatggcctggtagtggtccacca
caagcaccaccaccattaaataatagtcaccatagtggtcctgttcaaccacctacacct
accaaagtacctcccccatcatcttccccacaacagcagcagcagcagcaacaacagcaa
caacaacaacaacaacaatcaccacaatcacagcctcagcaacatcagcaaccaccaatt
cagcaccctccccctgcacaatcaccattacaccatcaccaccctcatcatcctccccct
ccaggaccccatatgcatccacatgctcatcaaatgcattcaatgcaacaaggcacttct
cctggaccacctccacccgtttcacctggtcccaggcctcatacaccacctcatcctcac
tacctcaagcaacacttacagcaacaacacaaagggcctggaggctatcaaacatcaggt
ccaattccacctaattctggaccaggaaattatttaaattctatgcctccacatagtatg
ggtccaccagcaccagttcaatctaatactggtcctcaaatggcaccaccaaatccttca
atgatgtcagttgaccatgaagtatcacagcaacagcaaagccttagtggtgttgtaact
tctgtcgttaccactggacctgatggtactgctattgatgatgcaagtcaacaatcgact
ctatcgaatgcctcagcagcttctggtgatgactcaaattgtacaacacctaaaagaaaa
gaaaacatgagtggtggtatgatgtaccaacaaggaatgggtggtataatgggaccaccg
tgttcacctgcccatgatgagtattcaaatccagatccaatggcacccgcttggcctaga
ggacctccatctcataacccagtatttaatagccacatagctcctcaaaacgaacatgta
tatcgtccaaagaaacatgacagcttgagtaaactgtatgaaatggatgataatccagaa
cgacgtatttggttggataaattgttacattttatggaagaaagaggaacaccaatctct
acatgtcctactatctccaaaaacccccttgatttgttccgcttgtatatatatgttaaa
gagcgagggggtttcatggaagtttgcaaggtaacaaaaaataaaatatggaaagatgtt
gctggtttgttgggtattggtgcatcatctagtgcagcttacactctaagaaagcattac
actaaaaatttattaccatatgaatgtcactttgaccgcggaggcatagatcctatacct
ataatcaatcaagttgaatcttcctcaaagaaaaaaagttctaaagcaacatctgtacct
tctcctggttctgcaggatctaattcacaagactcgttaccatctgcaccaactgctcca
ggaccaggtcatgtagatggttacccaggatatggaggttatagtggtccacaagattat
aattcacctcaaagacctccacatcctcctcatggaacacaaggaagttaccaaggacaa
ggtggatacaatcagcaatatccaggcagcaatgatcagtatggacaacattatccacca
gttagtactccggttggttacccgagtggcccagtgagaccacctttatatccgccttat
tcaaatgatgctgacagaaattatggtggttcagttcctcctccacaaggtccaccaaat
actcctcagggacctggcaacggtcaagatccatatggacgtggaccagttccaccacca
tctggctatcaacaaccacccaggtttcctggacccccaccacctcagaattcttcacct
gctacagtaaaccaaacacaaggtggatcagtttctaccccaggctatccacctagtcaa
caacctcaacccgattattatcgacaagaacctcccgctagtcctggatatccacctact
agtgctccaggtacttacccaggaaaaggaatgccaccaccacaaccacggcgtcatcct
gattttgctaaagatcaacaagctggtcctcctcagccagctggttatccaggttatggt
cctcagcaacgacctatgtatccaggatggacaggtacaccgaatgctgcttctaatcaa
tatccaagacctggatatccacctggatctcaaccaccacagaattggtcacagggtccg
ccgcgttctatgcctccttcacacccaggacaaccaccccagtgggaacaacatagatat
ccgccacaaggacaaccttatggtgcacagcaaaatcattggggtccaatggcgcaagca
caaatgaggatgccaagacatggatatcgtcctgatggaagtaaaccgtatggaccacat
ggtccaatggctccaccaccacatatgaagcctggaatgccagggcaaccaatgtttcaa
ggcagtagtttattgaagcgagaagtcattttccctcctgatagtatagaagctgtaaca
ccaattctttataaacgtcgtcgaatgatgcggcacgacgttgcacccgtggatgcatgg
cgattgatgatgtctttacgctcaggtcttttagctgagtctacttgggccttggatgtg
ctcaatatattgctatttgatgatgtgtctatacccttttttggactaacacacatgcct
ggattattagatgtactcttagaacatttccggcagtcattggttgatatgcttgatact
gatatcaaatcgtattgctggtatgaaaagtctaaagtgatagaagatataccagacgtt
ggtgctgtagataatgtaaatccaaatgaaaaagcatatttcccagatcctaccttcccc
aatcaacgaccaattaagaattctgcaattattgatggatctaaagaattatttattaaa
aatggcaagagatcatgggatgtaattgataattatgacatgggatataacattgctgaa
acagatacaagttttcttgtgccttgttttcgttcagagtttggtcttgtgccatttgtc
aaattactgaagagtgataaacctaaaacagaaatattagatgataaggcatgtataaaa
aaagaattagatgataaggagttagtacaaaacagtattgacactattgtaaatataaaa
aatattaatgtgcgcgatccaatgggagtattgaagcgtaagtgcataacagactatgaa
gatgaaagtttctctaaagatgagtcaagcttgtcattaataagcgaaagtcaagattcc
attggtaaacggtgtgtgtgcatatcgaatatcttacgaaatctttcatttgttcctggt
aatgaattagagtttgcaaaaagtggcccatttcttggtttggttggcaagctgttatta
acacaccatgaacatccactgcgctcatcaaaaactaggaattatgataaagctgatgat
gacacagagtcattatttaattgtactacaacaacagatgctgatacaattgaaccaggc
aatgacgcaaagtggtggtgggattacttagacgttgtcagagaaaacttgctagtttct
ttggctaacattgctggttatgttgatttgagcacattcaatgaagatatttcacgccct
atcttagatggtctgctacattgggctatatgtccagcagctgcgggccaagatccattt
ccttctgcgccactctcacctcagcgactagcattagaatgtttgtgcaagttgtgtgtc
actgataataatgtagatctggtcattgctaccccaccttactcaagactagaaaaactg
gccaacgtccttactcgtttattatgcaggactgaagaacaagtactcagagaatttgca
gtcaatttgttacactacttagcagctgcagacagtggcatggcacgtacgatagcactt
caaagtccatgtgtttcattactggtagcatttatcgaacagactgaacagaacgctctg
agtgtggtgaacactcatgggctgaatgcactccgcgataatccagattcaatgggaact
agcttagacatgttaaggagagcagcacgaatattgttgttgttatcccgacatccagac
aacagacccttgttcttgcaacaagagcagaggttactgtcgttagtcatgagccagata
ctcgaccagcaagtggcagccctcatatcgcgcgtcctattccaatgttccagaaatacg
ccgtctcctctcgcccaataa
DBGET
integrated database retrieval system
