KEGG   Rhopalosiphum maidis (corn leaf aphid): 113555173
Entry
113555173         CDS       T06065                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03030  DNA replication
rmd03410  Base excision repair
rmd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113555173
   03410 Base excision repair
    113555173
   03420 Nucleotide excision repair
    113555173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rmd03032]
    113555173
   03400 DNA repair and recombination proteins [BR:rmd03400]
    113555173
Enzymes [BR:rmd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     113555173
DNA replication proteins [BR:rmd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    113555173
DNA repair and recombination proteins [BR:rmd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      113555173
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N
Other DBs
NCBI-GeneID: 113555173
NCBI-ProteinID: XP_026815331
LinkDB
Position
2:complement(89682778..89695179)
AA seq 2242 aa
MAPANTGRFVKPLEKLYFNQFKEDSNDVRLKQSIENDLIDNKYGFVRVKDYQEHTGYLIN
MHSTEIVDEDKRLVAAVDYYFIQDDGSRFRVTQPFQPYFYLLAKKEYVQEVVAYISKKFA
GSFTSIDTVMKEDLDLPNHLIGLQQRYIKISFATVTEMNKMRQAIMPAVRKNRMALKNNS
YYTEMLTESLANLSEVATSKKQVDHMENIIDIREYDVVYHVRVSTDLKIFTGLWYTVQCR
GPYNQAIFTHRDDIIDRPDMIVLAFDIETTKLPLKFPDANTDQIMMISYMIDGQGYLINN
REIISADVVDFEYTPTPEFEGLFTVFNEPDEAALINRFFEHIMEIRPHIIVTYNGDFFDW
PFVETRAAVHDLNMSQEIGFSKNPAGVYSCRPAMHMDCLCWVKRDSYLPVGSQNLKAVAK
AKLRYDPVELDPEDMCRLATDEPQVLSNYSVSDAVATYYLYMKYVHPFIFALCTIIPMEP
DEVLRKGSGTLCESLLMVEAFHANIIFPNKQEQELNKLSDDGHVLDQETYVGGHVEALES
GVFRADIPCRFRLDTSAFDMLIEKSPEIIRFAIEEEEKVPMDSVTNLNEILEDIVKKLEA
LKADPYPLLKPLIYHLDVGAMYPNIILTNRLQPSAMVNEEVCAACDFNIPGAKCQRTMTW
QWRGELMPASRTEFQRIQQQLETEKFPGQFPNDPPRAFHQLRRDERATWEKKRLTEYCRK
VYKKTHVTKIEERSTTICQKENSFYVDTVRAFRDRRYEYKGLCKVAKKQISEAIAIGDPV
EIKSAKNREILYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGIVCCTGAAIITKAREI
IEKIGRPLELDTDGIWCILPSTFPENYNIESTHAKKPKFTISFPNAVLNSMVKDHFTNHI
YHDLVDSKNLVYEQRSENSIFFEVDGPYLAMVLPASKEEGKKLKKRYAVFNLDKSLAELK
GFEVKRRGELQIIKIFQSSVFEAFLKGDTLEKCYESVATVADYWLDVLYSKGKNMPDSEL
FELISENRSMSRKLEDYGAQKSTSISTAKRLAEFLGDQMVKDKGLACRFIISKKPEGTPV
TQRAIPLAIFQSELSVKRHYLRRWLGDHSIDDIDIRDVLDWDYYIERLSGTIQKIITIPA
TLQGIANPVPRVKHPDWLHKKMLMKADPLKQRKITTMFQAAPMHVQENLTEQHSLQDIED
FGENKDNNHVDIRPRPMVTKKRKRDPSPIDARNWKEALGPPPPASDIQNWIVYQKKKWNW
QLEMRAKIIGKHGKRLRDDQIHVPKGQAGTLGGFLRRAQQTLLSQPWQIIQVCQSGEPGV
LKLWAMIGDELHNIRMNIPRFFYVNQRQPEIDDSEKYIGCIKVNMILPRARPVLNLYQYT
VLEKDFGETKDNFMCNLSKPGVEGIYETKVTPELRALLNLGCMCSVTLEAAKKMAALPDL
GNFSLEQMKQVSHKYLSNSSIKDIFLYCNKAPTGLRAMYALFLTPNKKAFVWVTDTVRTN
RMANLNTLYSKERTNKISRGHSESSIPPSDVTFEVRIETEERQVYRQIQRTLQSYRDEKR
GPTMLVVQSPIDSQVLLSNIPIMTEFPVVTLHVQDSTASMYAQMEWQRLGCSLIVNHYLN
SPENINIMLEQCRYLQIPLGNLPADVTLFASDIFFARHLMKHNFVLWISETDKPDLGGRE
TDDNRMLMDSEESSSMLVNNEGCYTSYCIELEIDALPVTTLLQSHHIHDFEGTSAGVAFD
QIPQASLEEIMDGGTYVTPTYDEIALCSAAFRVLRSMVNVWFRDVVLHKNRFADFQMVHF
YRWLRSPNALLYDPALRKTLYSLMRKLFMQLIAEFKRLGSTIIFANFNKIVICTKKKSLE
DAIFYVRYVVQNITNKELFHSLQISLGPCWEYLMWLDLWNYSGVKAKFSDKLKEAMGDII
DMSNEDVEHLLKEHKAPGPDIEEVGIEMNWNISEFLPNVCHARKHFEETIAVYMSAIYKH
MRSIDSVTLKRISESLSQITQSNMLGVASCEGVAEYAKTVISDELTTRLFSITQKIYKKY
PVLDVELQETLSPFLQNKGKHLNPALQFVKTVCKVLSLDFGIEDDIMKLRKNLLRLIGVG
NFSDEADWTDPCLSWTLPEVICKSCNHCRDIDLCKDSHRSVVDGKKTWLCPNCNSCYDNM
LIEHFLIDALGRKVMAYTLQDLQCTKCSAIKMENLNAYCSCAGNYTTVIPRNDMMSYLKT
FKAIADYYDMTLLQQILKQYLD
NT seq 6729 nt   +upstreamnt  +downstreamnt
atggctcctgcaaatacaggtcgttttgttaaacccttagagaagttatattttaatcaa
tttaaagaagattccaatgacgttcggttgaagcaatctatagaaaatgatttaattgac
aataaatatggttttgttcgtgttaaagattaccaagaacatactggttatctcatcaac
atgcatagcacggaaattgttgatgaagataaacgtttggtagctgctgttgattattat
tttatacaagatgatggatctcgatttagagtcacgcaaccatttcaaccttatttctat
cttttagctaaaaaagaatatgttcaagaagttgttgcttatataagtaaaaagtttgct
ggtagttttacaagtattgacactgtaatgaaagaagacctagacttgccaaaccatctt
attggtttacaacaaagatatataaaaatttcatttgcaacagttactgaaatgaataaa
atgcgccaagctataatgccagcagtacgtaaaaatcgaatggcactaaaaaataattcc
tattacacagaaatgttaacagaatctttagctaatttatctgaagtagccacatcaaag
aagcaagttgatcacatggaaaatataattgatatcagagagtatgatgttgtatatcat
gtccgagtatctacagatctaaagatatttactggattatggtatacagttcaatgccgt
ggaccctataaccaagctatatttactcaccgtgatgatattatagaccgtcctgatatg
attgtcttagcatttgatattgaaaccacaaaacttccacttaaatttcctgatgcaaat
actgatcaaattatgatgatttcatatatgattgatggtcaaggatatttaattaataat
cgggaaattatatctgcagatgttgttgattttgagtacacaccaacaccagaatttgaa
ggtttatttactgtttttaatgaacctgacgaagctgctttgatcaatcgcttttttgag
cacataatggaaatccgccctcatataattgttacatacaatggtgacttttttgattgg
ccatttgtagaaacacgagcagcagttcacgatttaaatatgtctcaagaaataggattt
tctaaaaatccagctggagtatatagttgtcgcccagctatgcatatggattgtttatgt
tgggtaaaacgagattcttatcttccagtaggatcacaaaatttaaaagctgttgctaaa
gccaaattacgttatgacccagttgagcttgatccagaagatatgtgtcgactagcaaca
gatgaacctcaagtactttctaattattcagtgtcagatgctgttgctacttattattta
tatatgaaatatgttcatcctttcatatttgctttatgcacaatcatcccaatggagcct
gatgaggttttaagaaaaggttctggaacattatgtgaaagtcttttgatggtagaagca
tttcatgcgaatattatctttccaaataaacaagaacaagaactaaataaacttagtgat
gatggtcatgtgttagatcaagagacttatgttggtggccatgtggaagcattagaatct
ggtgtatttcgagctgacataccttgtagatttagattagatacatcagcttttgatatg
ctcattgagaaatcacctgaaataattagatttgcaattgaagaagaagaaaaagtgcct
atggatagtgtaacaaatttaaatgaaatattagaagatattgttaagaagttggaagcc
ctaaaagcagatccttatccattattgaaaccattaatatatcatttagatgttggtgct
atgtatcctaatattatacttacaaatcgattacagccttcggctatggttaatgaagaa
gtttgtgctgcctgcgattttaatattccaggtgctaagtgccaaagaactatgacttgg
caatggagaggagaacttatgcctgcatcaagaaccgagtttcaacgtatccaacagcaa
ttagaaactgaaaagttccctggtcaatttcctaatgaccctcctagagcatttcaccaa
ctgaggcgagacgaaagagccacttgggaaaagaaacgtttgactgaatattgtcgcaaa
gtctataaaaaaactcatgtaaccaaaattgaagaacgttctacaactatttgtcaaaaa
gaaaattctttttacgttgatacagtacgagcattcagggatagacgttatgagtataaa
gggctgtgcaaagttgctaaaaaacaaatatctgaagcaatagcaattggtgatcctgtt
gaaatcaaatcagctaaaaaccgtgaaatattatatgattcattacagttagctcacaag
tgtatccttaattcattttatggttatgtcatgagaaaaggtgcacgttggcatagcatg
gaaatggctggaatagtgtgttgtactggtgctgctataattacaaaagctcgtgaaata
attgagaaaattggtcgtcctctagaattagatactgatggtatatggtgtatacttcca
tcaacatttcctgaaaattataatattgaatcaacacatgcgaaaaaacctaaatttact
atatcttttccaaatgcagttttaaactcaatggtcaaagatcatttcaccaatcatatc
tatcatgatttagttgattcaaaaaatctagtttatgaacaaagaagtgaaaattctatt
ttttttgaagtcgatggtccttatttagcaatggtcctaccagcttctaaagaagaagga
aaaaaactaaaaaagcgttatgctgtattcaatttagataaatcactagcagaattgaaa
ggatttgaagttaaaagaaggggagaacttcaaattattaagatttttcagtcatcagta
tttgaagccttcttaaaaggtgatacattagaaaaatgttatgaaagtgtggcaactgtt
gctgattattggctggatgttttatactccaaaggtaaaaacatgccagattctgaattg
ttcgaactgatatcagaaaatcgttctatgagccgtaaacttgaagattatggagctcaa
aaatcgacttctatatctacagctaaacgtttagctgaatttttaggcgatcaaatggtg
aaagacaaaggacttgcttgtcgttttataatatccaaaaaaccagaaggtactccagtt
acacaaagagctataccattagctatatttcaatctgagttaagtgtgaagagacattat
ttaagaagatggcttggtgaccattcaattgatgatattgacattcgggatgttcttgat
tgggattactatatagaacgtttaagtggcacaattcagaaaatcattactattccagca
actttacagggaattgctaatccagttccaagagttaaacatcctgattggttacataaa
aaaatgttgatgaaagctgatccattaaagcaaagaaaaataacaaccatgtttcaagca
gcaccaatgcatgtgcaagaaaatttaactgaacaacactcacttcaagatatagaagat
tttggagaaaacaaagataataatcatgtagacattagaccaagaccaatggtaaccaaa
aaacgtaaacgtgatccttcgccgattgatgctagaaactggaaggaagctttaggacct
ccacctccagctagtgatattcagaattggatcgtgtatcaaaagaaaaaatggaattgg
caacttgaaatgagagctaaaattattggtaaacatggtaaacgtttgcgagatgatcaa
attcatgtacctaaaggacaagctggtacactaggaggatttttaagacgagcacagcaa
acattactaagtcaaccctggcaaattatacaggtgtgtcaatctggcgaacctggtgtt
ctaaaactttgggccatgattggagatgagttacataatattcgaatgaatatacctaga
ttcttttatgtgaatcagaggcaacctgagattgatgacagtgaaaaatatattggatgt
attaaagtgaatatgatattgcctagggccagaccagttttaaacttataccagtacacg
gttttggaaaaagattttggtgaaaccaaagataattttatgtgtaatctatccaaacct
ggagttgaaggaatttatgaaactaaagttacaccagaattaagagctttattaaacctt
ggatgtatgtgttctgtaactttggaagcagcaaaaaaaatggccgcattgccggatctt
ggaaatttttcattagaacaaatgaaacaagtgtctcataaatatttatccaacagttca
ataaaagatatatttttgtattgcaataaagcaccgacgggtttacgtgccatgtatgca
ctgtttttaacacctaataaaaaagcatttgtttgggtcacagatactgttcgtacaaat
cggatggcaaatttaaacactttgtatagcaaagaacgtactaacaaaatttctcgtgga
cacagcgaatcgagtattcctccatctgatgtaacttttgaagttagaatagaaacagaa
gaaaggcaagtttacagacaaatacagagaactcttcaatcgtatagagatgaaaaacga
ggacctacgatgctggtagttcagtccccaatagacagtcaagtattgctgtccaatatt
ccaataatgactgaattcccagtggtaactctccatgtacaagactctactgcttctatg
tatgctcaaatggaatggcaacgtttagggtgtagcttgattgttaaccactatttaaat
agtccagaaaacataaatattatgttagaacaatgcagatacttacaaatacctcttgga
aatttaccagcggatgtaacattatttgcgtcagatattttctttgctagacacttgatg
aaacacaattttgtattatggatttcagaaaccgataaacctgatttaggtggtcgagaa
acagatgacaatagaatgttaatggactctgaagaaagttcaagtatgctggtcaataat
gaaggctgttatacttcgtattgtatagaacttgaaattgatgccttacctgtcacaaca
ttgttacagtcacatcatattcatgattttgaaggcacaagtgctggtgttgcatttgat
caaatacctcaagcttctcttgaagaaataatggatggtggaacatatgtaacaccaact
tacgatgaaatagcattgtgttcagctgcatttcgagttttacggtccatggtaaatgtt
tggtttcgtgatgttgtgttgcacaaaaatcgatttgctgattttcaaatggtacatttt
tataggtggttaagatcaccaaatgcattattatatgatcctgctttacgcaaaacactt
tacagtttgatgagaaaactgtttatgcaattaattgcagaatttaaaagacttggttct
actattatatttgccaacttcaataaaatagtcatttgtacaaaaaaaaaatcactcgaa
gatgcaattttttatgtgcgctatgttgtacaaaacataaccaacaaagaattgtttcac
agcttacaaatatcattaggaccatgttgggaatatttgatgtggctagatttgtggaat
tattctggagtaaaagccaagttttctgataaattaaaagaagcaatgggtgatatcatt
gatatgtcaaatgaagacgttgaacatcttctcaaagaacacaaagcacctggacctgac
attgaagaagtgggaatcgaaatgaattggaatatatctgagtttttacccaatgtttgt
catgctcgcaaacattttgaagaaacaattgctgtttacatgagtgcaatttataaacat
atgcgatcaattgattctgtaacattgaaacgtatatcagaatcattatcacaaattacc
caaagtaacatgttaggtgttgcgtcatgtgaaggtgtagcagaatatgcaaaaactgta
atttcagatgaacttacaacaagattattctcaataacacaaaaaatttataaaaaatat
ccagtgttagatgtagaactccaagaaaccctttcaccattcttacaaaataaaggaaaa
catttaaatccagctctgcaatttgtgaagactgtttgtaaagtactttcactggatttt
ggaattgaagatgatatcatgaaattaagaaaaaatcttttacgcttaattggtgttggt
aattttagtgatgaagctgattggacagatccgtgtctttcttggacattacctgaagta
atctgtaaaagttgtaaccattgccgagacatagatttgtgtaaagattctcatcgaagt
gtagttgatggaaaaaaaacatggctatgtcctaattgcaatagttgttatgataatatg
ctaattgaacattttttgatcgatgctcttggtagaaaagtaatggcctataccctacaa
gatctgcaatgtacaaaatgttcagcaattaaaatggaaaatctcaatgcttattgctca
tgtgctggtaattacacaacagtaatacccagaaatgatatgatgtcatatctgaagaca
tttaaagctattgctgattactatgacatgactctactacaacaaatattaaaacaatat
ttggattaa

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