Rhopalosiphum maidis (corn leaf aphid): 113555298
Help
Entry
113555298 CDS
T06065
Name
(RefSeq) tetratricopeptide repeat protein 30A
KO
K19683
tetratricopeptide repeat protein 30
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rmd03037
]
113555298
Cilium and associated proteins [BR:
rmd03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
113555298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC3
TPR_12
TPR_16
SRP_TPR_like
TPR_CcmH_CycH
ARM_TT21_N
ARM_TT21_C
DUF285
TPR_6
ARM_TT21_2nd
TPR_Slam
TPR_8
E_motif
Motif
Other DBs
NCBI-GeneID:
113555298
NCBI-ProteinID:
XP_026815521
LinkDB
All DBs
Position
2:3600083..3603392
Genome browser
AA seq
669 aa
AA seq
DB search
MLCLDFYCFTIVLLIIFYKNLVKMSKIADGNYTAVIYTLIKEKQYNDVIEIINNMSDNNR
NTRPGLSLLAYCYYYTDDFQNASTIYEQLAVLWPQEVDYQLQHAQSLYSAGRYEDALRAA
NGITTSGYENKVRKLTAAIRYGMEDIAGARSLLETNSGLNDDPDTDINYGCLLYKESRYE
EALQKFLNAQTMLGYRPHLSYSVALCYYKLKDFTSSLKHIGDIIDRGIREHPELGIGMTT
EGIEVRSVGNTLTLHESALVEAFNLKAAIQFEKNDIDSAREAMTDMPPRWEEELDSVTLH
NQALCSVDMSPTQGFHKLQFLMQQSTYPQETLQNLLILYCKHGYHDLASDVISTYSPVKD
KYLSNYIREFVDAVIAQQTSPDEAYRKLDNMANKLADSLRKATRSVQESREARDDKRAKS
ALLDYENTLEKFIPVTMAQAKIYWDLENYAQAETIFYKSVEFCNENDTWRLHVAHVLFMQ
EKFKEAIAFYEPIVKKNYNNILSVSAIVLANLCVSHIMTAQNEEAEELMRKIEKEEERLY
YQEPEKKVFHLCIVNLVIGTLYCSKGNYEFGISRVIKSLEPYNKKLGMDTWFYAKRCMLS
LIENMTKHIIVMRDSFYNECLVFLNQCEFHGKEVATMPEEEESTGKKELNNVTCEARLLK
SLILRQLEY
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgttatgtttggatttttattgttttactattgtattgttgattattttctataaaaat
ttagttaaaatgtcaaaaattgctgatggtaactacactgcggttatttacacattgatc
aaagaaaaacaatataatgatgttattgaaatcattaataacatgtcagataacaataga
aatacaaggcctggcttatctttattagcctactgctactattatacagatgactttcaa
aatgcatcaacaatatatgaacaactggccgtactgtggccacaggaagtagattatcag
ttacaacatgctcaatcactttattctgctggacgatatgaagatgctttaagagcagca
aatggaattactacgagtggttatgaaaacaaagttcgaaaactaacagccgcaattaga
tatggcatggaagacatagcaggtgcacggtctttgttggaaaccaattctggtcttaat
gatgatccggacacagacataaactatggatgcctactctacaaggaaagtcggtatgaa
gaagcattacagaaatttttaaacgcacaaacaatgcttggttacagaccccatttgtca
tacagtgttgcattatgctattataaactaaaggatttcacctcgtcactgaaacacata
ggtgatattattgatagaggcataagagaacaccctgaattagggattggcatgacaact
gaaggaattgaagttcgtagtgtcggtaacactctgacgcttcatgaatcagccctggtt
gaagcattcaatttgaaagctgcaatccagtttgaaaagaatgacattgatagtgctagg
gaagctatgaccgatatgccaccaagatgggaagaagaactggactctgtcacattgcac
aaccaggcattgtgttcggtggatatgtcacccacacaaggattccataaattacaattt
ctcatgcagcagtcaacttatccacaagaaacgttacaaaatcttttaattttatactgt
aaacacggataccatgatttggcttctgatgttatatcaacatactcgccagtcaaggac
aaatatctatctaattatatacgagaatttgtggatgctgttattgcacaacaaacttca
cctgatgaagcatatcgtaaacttgacaatatggcaaataaattagctgattctttgcgt
aaagccacacgatcagtacaagagtcgagggaagccagagacgacaaaagagctaagagt
gctttacttgattatgaaaacactcttgaaaaatttataccggtcacaatggcccaagca
aaaatctattgggatctagaaaactatgctcaagcagaaaccatattttataagtctgtt
gaattctgtaatgaaaatgatacatggcgattacacgtagcacatgttttatttatgcaa
gaaaaattcaaagaagctattgcattttatgaaccaattgtaaaaaaaaattacaataat
attctttcagtgagtgccatcgtattggccaacctttgtgtgtctcatataatgactgca
cagaatgaagaagctgaagagttaatgagaaaaattgaaaaggaagaagagcgactatat
tatcaagagcccgaaaaaaaagtttttcatctttgtatagttaatctagttattggaaca
ttgtactgttcaaaaggaaattatgaatttgggatttcaagagttattaaaagtttagaa
ccttataataaaaaactgggaatggacacatggttttatgctaaacgatgtatgttgtcg
ttgattgaaaatatgacaaaacacataatcgttatgagagattcgttttacaatgaatgc
ttagtgtttctaaaccaatgtgaatttcatggcaaagaagtggcgacaatgcctgaagaa
gaggaatcgactggcaaaaaagagttgaataatgtgacctgtgaagcaaggcttttgaaa
tctcttatacttcgtcagttagagtactaa
DBGET
integrated database retrieval system
