Rhopalosiphum maidis (corn leaf aphid): 113555477
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Entry
113555477 CDS
T06065
Name
(RefSeq) SOX domain-containing protein dichaete-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmd03000
]
113555477
Transcription factors [BR:
rmd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113555477
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113555477
NCBI-ProteinID:
XP_026815601
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Position
3:62603854..62605769
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AA seq
468 aa
AA seq
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MDGAPHMGNFDFIMDHHHHHHHGRALESSVSPPTAVVMQQQQQSLQQQQQQQQQQQQQQQ
QQQQQLPGKADHIKRPMNAFMVWAKIQRRLIAHDNPKMHNSEISKRLGAEWKLLNETEKR
PYIDEAKRLRALHMKEHPDYKYRPRRKPKIQLHNNNNNNNNISGAHINNGGMLHGSAGNN
NLHHHHGAHHKQTNFHAFPVVTASGGPGGAANFNFPMPYFTASHHPALHSFDGYSSAGLV
SPYLSTAMPSFDPIHLSKLVAQQQAVVAQSGGGGGNSPSPSSQMAGSPPPAIDINAVNGL
QQPLQPHLHQQQQQQHHLQSPHAKNGGAAVVSSFYNQFYPPAAGSGKAGPYPHHPMSIFP
SPFSFYNNGGGAGAGTVEDHHGQQHHHSHQSAAAAAFAVQQHHHQQLQLQQLQQQHQQHL
QQQQQQQQQQQQQQQQQQQQQERPGSTSSDMENDPTRQVPNASNSNIH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggacggagctccacacatgggtaatttcgatttcataatggatcaccatcatcaccat
caccacggtcgcgcgctcgaatcgtccgtgtcgccgccgaccgccgtggtcatgcaacag
caacaacaatcgcttcagcaacaacagcaacagcagcagcaacagcaacagcaacaacaa
cagcaacagcagcagctcccgggtaaggccgatcacatcaagcggccgatgaacgcgttc
atggtgtgggcgaaaatccagcgacggctcatcgcccacgacaacccgaagatgcacaat
tcggagatcagcaagcggctgggcgccgagtggaaattgctgaacgagaccgagaagcgg
ccgtacatcgacgaggccaagcggctgcgggccctgcacatgaaggagcacccggactac
aagtatcggccccggcgcaagcccaagatccaattgcacaacaataacaacaacaacaac
aacatcagcggcgctcacatcaacaacggcggcatgctgcacggatccgcagggaacaac
aacctgcaccatcaccacggcgcgcaccacaagcagaccaattttcacgcgtttccggtg
gtgaccgcgagcggcgggcccggcggcgcggccaacttcaacttcccgatgccgtacttc
acggccagccaccacccggccctgcactcgttcgacggctactcgtcggccggactcgtc
agcccgtacctgagcaccgccatgccgtcgttcgacccaattcacctgtccaagctcgtg
gcccagcagcaggccgtcgtggcccagtctggcggtggcggcggaaattccccgtcgccg
tcctcgcagatggccggttcgccgccgcccgcgatcgacatcaacgcggtgaacggactg
caacagccgctgcaaccgcacctgcaccagcagcagcagcaacagcatcacttgcagtcg
ccgcacgccaagaacggcggcgcggccgtggtgagttcgttttacaatcagttctatccg
ccggccgccggttcgggcaaggcgggaccgtatccgcaccatccgatgagcattttcccg
tcgccgttctcgttctacaacaacggcggcggcgcgggcgccggtacggtcgaagaccat
cacggacagcagcatcatcacagccatcagtccgcagccgcggccgctttcgccgtccaa
cagcaccaccaccaacagttgcagttgcaacagttgcagcagcaacaccaacagcatttg
caacaacaacagcagcagcagcaacaacaacaacaacagcagcagcagcagcagcaacaa
caggagagacccggttccacgtcgtccgacatggaaaacgatccgaccagacaagttcct
aacgcgtccaactccaacattcattaa
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