Rhopalosiphum maidis (corn leaf aphid): 113555713
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Entry
113555713 CDS
T06065
Name
(RefSeq) homeobox protein six1-like
KO
K15614
homeobox protein SIX1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmd03000
]
113555713
Transcription factors [BR:
rmd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
113555713
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Motif
Other DBs
NCBI-GeneID:
113555713
NCBI-ProteinID:
XP_026816030
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Position
3:38913026..38960683
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AA seq
428 aa
AA seq
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MLIGSGTAGSFGSFNVDHPGVPSIISGLQGSPHHASTASQPQQHSPGSSSGGGGSGSAGG
GSAMTPLLPSFGFTQEQVACVCEVLQQSGNIERLGRFLWSLPSCDKLHKHESVLKAKAIV
AFHRGNFKELYRLLESNQFSAHNHPKLQALWLKAHYVEVEKLRGRPLGAVGKYRVRRKFP
LPRTIWDGEETSYCFKEKSRMVLREWYASNPYPSPREKRELAEATGLTTTQVSNWFKNRR
QRDRAAEQKDGMSGSRSPTGMGDGCDKMVGGPPSNLDSSSSESIDGDNMKSHIHMLHKPS
AISFGHSMITSQDHLSSHEMMFGGGGDLKSSMSGVGGVGAGGMSMMANSAAAAAAYHHQT
QLIGGGVGGGGGGGGGGIVGGFGSPIGSRPLIGTGVGGVGNGDHHSHLQQIVAGHPADPS
LLHDYHSL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcggcagcggtacagcaggcagcttcgggagtttcaacgtggaccatccgggc
gtgcccagcatcatcagcggtctacaagggtcgcctcaccacgcgagcaccgccagccag
ccccaacagcattcgccgggctcgtcatcgggcggcggcggcagcggcagtgccggagga
ggtagcgccatgacgccactgttgccgtcgttcgggttcacccaagaacaggtggcctgc
gtgtgcgaagtgctccagcaatccggaaacatcgagcggctgggcaggttcctgtggtcg
ctgcccagttgcgacaagcttcacaagcacgagagcgtactcaaggcaaaggccatcgtg
gcgtttcaccggggtaacttcaaagagctgtaccgtctgctggagagcaaccagttctcc
gcacacaaccatcccaagctgcaggcgctctggctcaaggcgcactacgtggaagtcgaa
aagctcaggggtcgtccgctgggtgctgtcggaaagtaccgggtccgccgcaagtttccg
ttgcctcggaccatatgggacggcgaggagaccagctactgttttaaggaaaagtcccgg
atggtgttacgcgaatggtacgccagtaatccgtatccgagtcccagggagaaaagggaa
ttggccgaggccactggattgactacgacccaggtgtccaactggttcaaaaaccgcagg
caaagagatcgggcagccgaacagaaagatggcatgtccggcagccggagtccaacggga
atgggtgacggatgcgataagatggtcggtggcccgccgtccaacttagactccagttcg
tccgaatctatcgacggcgacaacatgaagtcgcacatacatatgctgcacaaacccagc
gcgatatcgttcgggcactcgatgatcacaagccaggaccatttgtccagccacgagatg
atgttcggaggcggaggcgacctcaagtcgtcgatgtccggcgtcgggggcgtcggagcg
ggcggcatgtccatgatggccaactcggcggccgcggccgcggcgtaccaccaccagaca
cagctgatcggcggcggcgtaggaggcggcggcggcggcggcggcggcggcatcgtcggc
ggattcgggtcgcccatcggaagtcgcccgctgatcggcaccggcgtcggcggcgtcggc
aacggcgaccaccacagccacttgcagcagatcgtcgccggccaccccgccgatccttcg
ctactgcacgactaccattccttatga
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