Rhopalosiphum maidis (corn leaf aphid): 113555791
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Entry
113555791 CDS
T06065
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04120
Ubiquitin mediated proteolysis
rmd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113555791
04120 Ubiquitin mediated proteolysis
113555791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmd04121
]
113555791
Enzymes [BR:
rmd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113555791
Ubiquitin system [BR:
rmd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113555791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
Serglycin
zinc_ribbon_16
zf-RING-like
FANCL_C
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
113555791
NCBI-ProteinID:
XP_026816132
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All DBs
Position
3:33776448..33784110
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AA seq
652 aa
AA seq
DB search
MSTTTAAAAAKMTSTTAVAVSLVLSSCVIANAFRQKKQFYPSVVYICKSNPSMAIMYMQA
LVAVYLIGKLTGKLFFGSLRPAESERLIEKAWYAVTETCLAFTIFKDDLSPKFVALFTLL
LFLKCFHWLAEDRVDYMERTPVISYIFHLRIWLLLFILTLGDLYFVHDAYTTTMAKGPSV
QLVFGFEYALLVTLAANAGFKYVLHAVDVHSDTFWESKAVLLLYLEFFIGLCKAVMYVVF
LIIMVRSYTIPLFAFRPMYHTLRNFKKVFQDLVLSRRAIHNMNTLYPDATLQDLQAIENV
CIICREDMTAAAAKKLPCNHIFHTSCLRSWFQRHQTCPTCRLDILRPTPSTTQNVNVPAP
PTPNIGRTVQEAPSTDAAASSSATDNSRGPNASNHTNVSPGQAGTSGSSYYNQTPLQYQF
RPCTFQQRSTSIDEINGNNNDNSNSGIPEPNNMNESWIAFMNAAGLGGGIGLPSLFNDIP
QTSSNLPFTNIPRIPLNLPFVGGIAIQPPNIPPNLDTLTDEELRLMEQNTRQGCLARIKY
ITDIKCMLDAAVVMMNQYSSACLVAGLDSTDSTLNSETKTADTTENDDQSETRSPSNISS
ETDCSGGVTSSSSGSGSGSGSGSSEDQLLPEETEQQRIIRLKRLEKFGSNSV
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaaccacggctgcggccgctgcgaaaatgacgagcaccacggctgtagccgtg
agtctagtgttgtccagttgcgtaatagcaaatgcttttcgtcaaaagaaacaattttac
ccgtcagtcgtgtatatatgtaaatctaatccaagtatggcaataatgtatatgcaggct
ttagtggctgtctatttaattgggaaattaactggtaaattattttttggctcattacgc
cctgcagaatcagagcgtttaatagaaaaggcctggtacgctgtgacagaaacatgttta
gcatttactatttttaaagatgacctgagtcccaaatttgtagctttatttactttatta
ttatttctaaaatgttttcattggttggcagaagatcgagtagattatatggaacgtact
ccagttatatcatatatatttcatttgcgcatatggttgctattattcatcttaactttg
ggtgacttatattttgtccatgatgcatacactactacaatggccaaaggcccttctgtg
caattagtatttggatttgaatatgcattacttgttacattagcagctaatgcaggattt
aagtatgtattgcatgcagtagatgtacacagtgacaccttttgggaaagtaaagccgtc
ctcctgctgtaccttgaattttttattggtttgtgtaaagctgtgatgtatgtggttttc
cttataatcatggttcgatcctatacaataccactatttgcatttcgaccaatgtaccat
acactaagaaatttcaaaaaagtattccaagaccttgtactttctcgtagagcaatacac
aatatgaatactttatacccagatgctacattacaagatttacaagccattgaaaatgtg
tgtattatatgccgtgaagatatgacagctgcagctgcaaaaaagttgccatgcaatcat
atatttcatacatcatgtctacgtagctggttccaacgtcatcaaacatgtcctacttgt
aggttagacattttgcgcccaacaccttcaacaactcaaaatgttaatgttcctgcacca
ccaacaccaaatattggcaggacagttcaagaagcaccatcaactgatgcagctgcatca
tcttctgctactgataacagtcgtggaccaaatgctagtaaccacactaatgtatcacct
ggtcaagctggaactagtggaagttcctattataatcaaacgccactacagtatcaattc
agaccatgcacatttcaacaacgatcaacatctattgatgaaattaatggcaacaacaat
gataattcaaacagtggtatacctgaaccgaataatatgaatgaatcatggattgcattt
atgaatgcagcaggactaggtggtggaattgggttaccatcattattcaatgatataccg
caaacatcctcaaatttaccatttacaaacataccacggattccacttaatttaccattt
gtcggtggaattgcaattcagcctccaaatatacctccaaacttggatacattaactgat
gaagaattacgtttaatggaacaaaatacaagacaaggatgtttagcacgcattaaatac
attactgatataaaatgtatgctggatgctgctgttgtgatgatgaatcagtattcatca
gcatgtcttgtagctggtcttgatagtactgattcaactttgaacagtgaaactaaaact
gcagatactacagaaaatgatgatcaatcggaaactagatcaccaagtaatatttcttct
gaaactgattgtagtggaggagttacaagcagcagcagtggcagtgggagtggcagtgga
agcggcagcagtgaagaccaattgctcccagaagaaactgaacagcagcggattattagg
ttaaaaaggttggaaaaatttggtagcaattccgtgtaa
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