Rhopalosiphum maidis (corn leaf aphid): 113555913
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Entry
113555913 CDS
T06065
Name
(RefSeq) beta-TrCP isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04120
Ubiquitin mediated proteolysis
rmd04310
Wnt signaling pathway
rmd04341
Hedgehog signaling pathway - fly
rmd04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113555913
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113555913
04341 Hedgehog signaling pathway - fly
113555913
09150 Organismal Systems
09151 Immune system
04624 Toll and Imd signaling pathway
113555913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmd04121
]
113555913
03036 Chromosome and associated proteins [BR:
rmd03036
]
113555913
Ubiquitin system [BR:
rmd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113555913
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113555913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-TrCP_D
Beta-prop_SCAP
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
F-box-like
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IP5PC_F
WD40_like
Beta-prop_IFT140_1st
F-box
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
Beta-prop_VPS8
WD40_RFWD3
F-box_5
Beta-prop_RIG_1st
WD40_2
Motif
Other DBs
NCBI-GeneID:
113555913
NCBI-ProteinID:
XP_026816331
LinkDB
All DBs
Position
1:complement(78631290..78650735)
Genome browser
AA seq
538 aa
AA seq
DB search
MDRDNVTAMETDKIVDDDIGSPQYPPMTILYDPTIRKDSATNGVTSPQFATEQELCLMYF
DKWSEQHQIDFVEHLLARMCHYQHGHIDTYLKPMLQRDFISLLPKKGLDHVAENILSYLD
AESLYAAELVCKEWYRVISEGMLWKKLIERKVRTDSLWRGLAERRGWIQYLFKPKPGEHH
PDHFSYRALFPKIIQDIESIESNWRTGHFLLQRINCRSENSKGVYCLQYDDNKIVSGLRD
NTIKIWDRNTLECVKVLTGHTGSVLCLQYDDKVIVSGSSDSTVRVWNVATGEMVNTLIHH
CEAVLHLRFSNNMMVTCSKDRSIAVWDMVSTSEMTLRRVLVGHRAAVNVVDFDDKYIVSA
SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIEYGACLRVL
EGHEELVRCIRFDSKRIVSGAYDGKIKVWNLVAALDPRAPASTLCLRTLMEHSGRVFRLQ
FDEFQIVSSSHDDTILIWDFLNYNDTNNSAAGTSNNVLHGSSNAHANDTLPPLPPGFE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggatagggacaatgtgactgctatggaaactgataaaatagtcgatgacgatatcggt
agtcctcagtatccaccaatgacgatcttatacgacccaacaattagaaaagattccgca
accaatggtgttacatctccacaatttgccaccgaacaagagttgtgtcttatgtacttt
gataaatggagcgaacagcaccaaatcgactttgtcgaacacctattggcacgcatgtgt
cactaccaacatggacacatcgacacatatctaaaacctatgttacaaagagacttcata
tcactcttacccaaaaaaggcctagatcatgtggctgaaaatattttatcttacctcgat
gccgaatctttatatgctgcagaattggtatgtaaagaatggtatagggtaatttcagaa
ggtatgctttggaaaaagctaattgaacgaaaagtacgtacagattcattatggcgagga
cttgctgaacgaagagggtggattcagtatttattcaaaccaaaaccaggtgaacaccac
ccagatcacttctcctacagggctctgtttcctaaaattatacaagacatagaaagtata
gaatcaaattggcgaactggccattttctattacaaaggataaattgccgttctgaaaac
tccaaaggtgtatattgtttacagtatgatgacaataaaattgtctcgggtttacgtgat
aataccataaaaatatgggatagaaatacattagaatgtgttaaggtattaactggccac
accgggtcagttttatgtttgcaatatgacgacaaagtgattgtgagtggttctagcgat
agtacagttcgtgtatggaatgttgctacaggtgaaatggtcaatactctaatacaccac
tgtgaagcagtcttacatttaaggtttagcaacaatatgatggtcacttgttcaaaagat
cgatcaatagctgtttgggatatggtgtcaactagtgaaatgactttgcgtcgtgtctta
gttggtcatagagctgcagtaaatgttgttgattttgatgataaatacattgtatcagct
tctggagaccgtactattaaagtatggaatacatcaagctgtgagtttgtgcgtactctt
aatggtcacaaacgtggtattgcctgccttcaatatagagatcgattagtagttagtggc
agttctgataataccatcaggttatgggatattgaatatggtgcttgtttgagagtactt
gaaggccatgaagaactagtacgatgcattagattcgatagtaaaagaattgtcagtggc
gcatatgatgggaaaatcaaagtatggaatttagtagcagctttagaccccagagctcct
gcatctacattatgtctacgtacacttatggagcactcgggacgagtgtttcgactccag
tttgacgagttccaaatagtcagctcttcacatgatgatacaatacttatttgggacttc
ctcaactataatgatacaaataattcagcagcgggtacatcaaataatgtcttgcacggt
agttctaatgcacatgcaaatgacacccttcctcctttaccacctggttttgagtaa
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