Rhopalosiphum maidis (corn leaf aphid): 113555917
Help
Entry
113555917 CDS
T06065
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmd04131
]
113555917
Membrane trafficking [BR:
rmd04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113555917
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
113555917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Prp19
Lgl_C
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Synaptobrevin
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
RNA_pol_inhib
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
113555917
NCBI-ProteinID:
XP_026816337
LinkDB
All DBs
Position
4:complement(51823510..51960807)
Genome browser
AA seq
1373 aa
AA seq
DB search
MKKFTFKGVLDGIRSSVAPQIKPDQDIVETLRPDYFQVAKTFRHGFPYQPTALAFDPIQR
LLAIGTKNGSLRIIGRPGVDAQVRHELEAAVVQVEFLMNEGALITVTADDSLHLWNFRQK
RADVVHSLKFQRERITVIHLPLRSKWLYVGSERGNVHFVNVETFTLSGYIINWNKAIEVT
RPTHPGPIVHLSDNPADSSKLLIGFETGLMVLWDLKTKKPECRWQWGDSLKSIDWHFEGK
QFTCSHNDGSLTTWNVKPSSKPANIIYPHAKNKTESCKPIQKVEWKSSKSGESYLIFSGG
LTADTAGRVPSITIMHGKTTTVLEMDHNIVDFVTLCESPYNSDVQEPYAVAVLMQNDLVL
IDLLSSGYPCFENPHPMDIHESPVSCVHYIADCPSDLIPAFYSVGSRSASKRTGYSENKW
PIAGGEWSPTSCSYNEIILTGHTDGSVRFWDASAGSLQVLYKLKTAKVFEKARSKSPEGG
DEDQFSVQLLSFCPESRKLAVAGISSYVVLFKFRKLESTFETTMLEIPIYSESLDEAAES
SPEEAPSKPPGASDDSSALVKVRTGPQKKPPGFQACLACVTPSTNGEPPGQITALTINSS
YGLLAYGLDNGIVIVDFIQKCVLLNISTADMYGSADPYQRAPRSPKRTTALSETSDGERC
RSPSIDQGLEDEAEELEELSKLALSPVGVYSTQVSPNPADWLDDTTERAEEALVLIPATA
PEPEELAEPGEPPPQPTPPTVTASSEPATPAPVKGNGRRTSHSWRGLKKQLSRVDLRLKN
TFNATPAKNKASTFYGSGSGEQPETDEVGNIGTVSTTATTTTTTTTGLPQIITETDGQEH
RPDGGSTQSQAVDQSSASAAATRPTELKLFDRDGKPIKPPRSTKEHRKRTSLDKQGNLSA
GSSRDARLLSVPNIKYSQRDPRHNRSNNQAFINLIKRLNKLDSSFSRSRSSSMSSLDNIT
TESIQCLTFGDSYTKKSDPSNFPTLWIGTSVGSVLTIMINLPPPGEPRTTQPVTVAPCGT
IFRLKGGVLTMSFLDCNGALIPYAYEAWRDEGRDKQKTPTKNSSGLNRMSPALTGSSESV
SSNPGGVSGSSVAQLQQQSQVSCDRQFVTIVSEKQVRVVALPSQNCVSKHVIPDADFMVK
SEVISMKDSVCLACYISNGHINIYSLPSLKVLVDVDFLALSDLSFQTQKQGIVDPMLSIW
GQQMFVNEDTDQIAKTFCFSNRGHGLFLNTPSEVQRFSVSTEFCQSLPEMMGELFQPHEM
PEPPKQSFFIGLFGGGSRSIDREELFGESTSGKAPKLVAKLVPGPSAQLDALGNRASTAA
SEISRAHLLAVERGEKLSNLEDRTARMMNEAEQFSSNARELMMKNKDKRWYQL
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcacgttcaaaggtgttttggacggtatacggtcctcggtggcgccgcag
atcaaacccgaccaggatattgtcgagacgctccggcccgactacttccaagtggccaag
acgtttcgtcatggttttccgtaccagccgactgctcttgcatttgaccccatacaacga
ttgttggccattggtactaaaaatggatctttacgaataattggaagacctggagtagat
gcacaggttagacacgaattagaggcggccgttgttcaggtggagtttctgatgaacgaa
ggagcattgatcacggtaaccgctgacgatagtttacacctatggaatttcagacaaaaa
agagctgacgttgttcacagtttaaaatttcaacgagaaagaattacagttatacacctt
ccactccgtagcaagtggctgtacgtgggttcggaaaggggaaatgtacatttcgtcaac
gttgagacgtttaccctttctggctacataataaattggaataaagccattgaagtgacc
agacctacccatccaggacccatcgtgcacctgagcgataatcctgcagattccagcaag
ttactcattggcttcgagactggtctaatggtgttgtgggacctgaagacaaagaaaccc
gaatgccgctggcaatggggtgactcgctcaagtcaatagattggcattttgaagggaaa
cagtttacgtgcagtcacaatgatggcagtctaaccacgtggaatgtcaagccgtcttca
aaaccagcaaatataatttatcctcacgcaaaaaataaaacagaatcatgcaagccaatt
caaaaagttgaatggaaatcatcaaaatctggcgaatcgtatttgatattttccggaggg
ttgaccgccgatactgctggccgcgtgcccagtataacgatcatgcacgggaaaacgact
accgttctcgaaatggaccacaacatcgtcgacttcgttacgctgtgcgaaagtccttac
aacagcgacgtccaagaaccgtatgccgtagcagtactcatgcaaaacgatcttgtgttg
atcgacctcctcagttcgggatacccgtgttttgagaacccacatccgatggacattcac
gagtcacccgtttcgtgtgtccattacatcgccgattgtccgtcggacctgataccagcg
ttctattcggtcggctcgagatctgcatctaaacggaccggctacagcgagaataagtgg
cccattgctggcggtgagtggagcccgacatcctgcagctacaacgagatcattctcact
gggcacacggatggtagcgttcggttttgggacgcaagtgccggcagtctacaagtactg
tacaaactgaaaactgccaaggtattcgaaaaggccaggtcaaaatcaccagaaggcggt
gacgaagatcaattttccgtgcaactgttgtcgttctgtccggagagcagaaaattagca
gttgccggcatctcgtcatacgtcgtgctattcaaattccgcaaacttgaatccacgttc
gaaaccacgatgcttgaaataccgatatactcggagagtctggacgaggctgccgagagc
tcaccggaagaagcgccatcgaaaccgccgggcgcgtccgatgatagttccgcgctggtc
aaggtccgaaccgggcctcagaagaaaccacccggcttccaagcatgtctggcgtgcgtg
acgccttccaccaatggcgaaccacccggtcagattaccgccctcacgattaattcatcg
tacggactgctcgcctacggtctggataatggtattgtgatagtagactttatacaaaaa
tgtgttctcctaaacatcagcactgccgacatgtacggcagtgcggacccataccaaaga
gctcccaggtcgccaaaacgaacaaccgctttgagcgagaccagcgacggcgaacgatgt
cggtcccccagtatcgatcagggcctcgaagacgaagccgaggaactggaagaactcagc
aaactggccctgagcccggtgggcgtgtactcaacccaggtatcaccgaatcctgccgat
tggctggacgacacgaccgagcgggcggaagaggcgctcgtcctaataccggccactgcg
ccggaacccgaggaactggcggaacccggagaaccacccccgcagccgacgccaccgacg
gttactgcgtcttcggaaccggccaccccagcgccggtcaaaggaaacggccgtcggacc
agtcactcatggcggggcctgaagaaacagctgagtcgcgtagatttgagactgaagaac
acgttcaacgcgacgccagccaaaaacaaggcgtccaccttctacggcagcggtagtggt
gaacaaccggaaactgatgaagtcggaaacatcggcacggtttccacgaccgccacgacc
acgaccaccactaccaccggtctacctcaaatcataaccgaaaccgatggtcaagaacat
cggccggacggtggtagcacgcagtcgcaggctgttgaccaatcatctgcttcggccgcg
gccaccaggcctacggagcttaaactgttcgaccgcgatggcaagcccattaaaccccca
cggtctaccaaagagcaccggaaacgaacgtcactggacaagcaaggcaacctatcagcg
gggtcttcgcgggacgcccgactcttgtcagtgcccaacatcaaatacagccaaagggac
ccgagacataaccgatcgaacaaccaagcgttcatcaacctcattaaacgactaaacaag
ttggacagctcgttctccagatcacggagttctagtatgtcgagcttagataacatcacc
acggagtcgatacagtgtttgacgttcggcgattcgtacacgaagaaatccgatccgtct
aacttcccgaccctctggataggcaccagcgtggggtcggtgctcacaataatgatcaat
ctaccacctcccggagaacccaggaccacgcaacccgtaaccgtcgccccttgtggtacg
atattcagactgaagggcggagtgcttaccatgtcgtttctggactgcaacggtgcatta
ataccctacgcgtacgaagcgtggagagacgagggccgagacaaacaaaaaacgccaacc
aaaaactcgagcggactgaaccgtatgtcaccagcgctaacgggtagctcggagagtgtg
tccagcaatcccgggggcgtcagcggttcgagtgtcgcacagctccagcaacagtcgcag
gtatcgtgcgaccgacagttcgtgaccatcgtcagtgagaaacaggtcagggtagtggcc
ctgccgtcgcagaactgcgtctccaaacatgtgatacccgacgccgacttcatggtcaaa
tctgaagtcatatccatgaaagatagcgtatgcctggcatgttacatatccaacggccat
ataaacatctatagtctgccgagtctcaaggtgctggtggatgtcgacttcctggcgctg
tccgacctaagttttcagacccagaaacagggcatagttgacccaatgttatccatatgg
ggccaacagatgtttgtcaatgaagacactgaccaaattgccaagacgttttgcttcagt
aatcgaggacatggattgtttttgaacacgccgtctgaggtgcagagattttctgtttcc
actgaattctgccaaagtctaccagaaatgatgggtgagctgtttcaacctcacgagatg
cctgaaccgcctaagcaaagtttctttataggactctttggaggtggctctagatccatc
gaccgtgaagaactgtttggtgagtctaccagcggtaaggcaccgaaacttgtggccaaa
cttgtgcccggtccgtcagcccaattagacgctcttggcaatcgagcgagcacggcggcc
agcgaaatatcgagagcccatctattggctgtggaacgtggtgagaagctcagtaaccta
gaagatcgcaccgctaggatgatgaacgaagccgaacagttttcctccaatgcccgagaa
ttgatgatgaagaataaggacaaacgatggtaccaattgtaa
DBGET
integrated database retrieval system
