Rhopalosiphum maidis (corn leaf aphid): 113556059
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Entry
113556059 CDS
T06065
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113556059
03036 Chromosome and associated proteins [BR:
rmd03036
]
113556059
Spliceosome [BR:
rmd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
113556059
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
113556059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
RRM_1
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Lsm_interact
RRM_occluded
RRM_7
Mad3_BUB1_I
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
113556059
NCBI-ProteinID:
XP_026816580
LinkDB
All DBs
Position
1:complement(77205136..77213500)
Genome browser
AA seq
852 aa
AA seq
DB search
MDVDSDSSCSSSDSNDEELEQFKQDELKKKIDVLENKITNNPSDYDAHVELIEVLRKADN
LDQLRMARKRLNDKYPLSANLWLDWIKDEIAIVTTDEEKDNIIKLCEKAVKDYLSIDLWL
EYVQFSIGCMSDTNGTDIIRELMERALTAGGLHVPNGNVLFEVYNEFEKLILMSLKQGTD
EKAINDQKRRINNLYRRQLSVPLFDMENTYAEYQQWLTTENLEIEKSTVDAYNKALSKLQ
QIQVFEDRLLSKEVKDRLDSYEEYIRWEKNPKEGGNKPSRIICLYERAIADIPLIQTLWA
DYIDYIVVTIKEADLILATCKRSVDNCTWSSDLWITYLIQAEANNQSHEEITAIMEKALS
SWFSSAAEYRSLYLSYIFYLRRRLNNTDAETKLKRIEDIRSMLEQSQKFLLESYGYSGDP
NCELLLWWTDFEAIITGDMERVRKMWNEILNAGLNQYSSYWMKYINIEIQFGDQKHVRKI
FARALMTNTDLPETIGTEWIRYETLYGDLDTLLNCKEKYKTKMKQVQETHEKDSKTENKT
GTKEKEAKKRKWDEREPTKNYNEKSNGNLKVNYAKNDKQEFESSPVKKFKTTEINLDKGG
RHMEVEGKENRSVFVSNLDFAVTELEVKDALSSVGHCEVLLVRDFKGRSKGFGYVLFEKP
EMVAEALKKDRECVNNRPMFVSKCEPDKQSRSSGLRFTTELEKNKLFVKGLPFTCTKTDI
ENIFKPYGALKDVRVVTFRNGHSKGLAYVDFEDEVSAAQALLKTDNMVIKDRTISVALSR
PPERKDPSEIKSYPPVAKFKSQSSTLLLGRRSKLSLTPSVLQKKSVQTASTSADDKTPLS
NDDFRKMLLGSK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgattctgattcttcatgttcttcgtcagactctaatgacgaagagcttgaa
caatttaagcaagatgaattgaaaaaaaaaattgatgttttagaaaataagattacaaat
aatccatcagattatgatgcacatgttgaattaatagaagtacttcgcaaggcagataat
ttagatcaactacgtatggctagaaaacgtttaaatgacaaatatccattaagcgcaaat
ttatggttagattggataaaagatgaaatagctatagtaactactgatgaagaaaaggat
aacataattaaattatgtgaaaaagcagtcaaagattatttaagtatagatttatggtta
gaatatgtacaattcagcattggttgtatgtctgatactaatggaactgacatcatacga
gaattaatggaacgtgcattgacagctggtggtcttcatgtacctaatggcaatgttctt
tttgaagtgtataatgaattcgaaaaattaattttaatgtctttgaagcaaggtactgat
gaaaaagctataaatgatcaaaaacgtcgtataaataatttgtatcgtagacaactttca
gtacctttatttgatatggaaaacacttatgcagagtatcaacaatggttgacaactgaa
aatcttgaaatagaaaaatcaactgtggatgcttataataaagctcttagtaaattacaa
caaattcaagtttttgaagatcgtttattatcaaaagaggttaaagatcgtttagattcg
tatgaagaatatatacgttgggaaaaaaatcctaaagaaggtggtaataagccaagtcga
attatatgcttgtatgaacgtgctattgctgatatacctttgatacaaacactctgggct
gattatattgactatattgtagtaacaataaaagaagctgatttgatattagctacttgt
aagaggtctgttgataactgcacatggtcatcagatctttggattacttatttaattcaa
gctgaagccaataaccaatcacatgaagaaattacagcaattatggaaaaggcattatct
tcatggttcagttccgcagcagaatatcgttccttgtatctttcttatattttttatttg
agacgacgtttaaataatacagacgctgaaacaaaactaaagagaattgaagatataaga
tcaatgttagaacaaagtcaaaaatttcttctagaaagttatggttattctggtgatcca
aattgtgaattgcttttatggtggactgattttgaagccattataactggagatatggaa
cgtgttaggaagatgtggaatgaaattttaaatgctggtcttaatcaatactcttcatat
tggatgaaatatataaatattgaaattcaatttggtgatcaaaaacatgtacgtaaaata
tttgctagagctttaatgacaaacacagatttacctgaaacaattggaactgagtggatt
agatacgaaacattgtatggcgatttagataccttattaaattgcaaagaaaaatataaa
actaaaatgaaacaagtacaagaaacacacgaaaaagattcaaaaactgagaacaaaaca
ggaactaaagaaaaagaagcaaagaaaagaaaatgggatgaaagagaaccgactaaaaat
tataatgaaaaatcaaatggaaatttaaaagtaaattatgctaagaatgacaaacaagaa
tttgaatcttctcctgttaagaaatttaaaacaactgaaataaacctggataaaggtggt
cgacatatggaagttgaaggtaaagaaaaccgttctgtatttgtaagcaacttggatttt
gctgtgactgaattggaagtgaaagatgcattgtcttcagttggtcattgtgaagtgtta
ttagtaagagatttcaaaggccggtctaaaggatttggttatgtgctttttgaaaagcct
gaaatggttgcagaagcattaaaaaaagatcgtgaatgtgtaaataatcgaccaatgttt
gtgtctaaatgcgaacctgataaacaaagtagatcttcagggttacgatttactactgaa
ttagaaaaaaataaattatttgttaaaggtttaccatttacttgtacaaaaactgatata
gaaaatatttttaagccatatggagctttaaaagatgtccgggttgtgacatttagaaat
ggtcattcaaaaggattagcttatgtagattttgaggatgaggtatcagctgctcaagca
ttgttaaaaacagacaacatggtaataaaagatagaactatatcagtagcattaagtcgt
ccaccagaacgtaaagatccttcagaaattaaatcttaccctcctgttgctaagttcaaa
tcacaatcttcaactctattattaggacgtcgttcaaaactatctttaacaccaagtgta
ttacagaaaaagtctgttcaaactgcatcaacatctgctgatgataaaactccacttagt
aatgatgacttcagaaaaatgctacttggtagcaagtaa
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