KEGG   Rhopalosiphum maidis (corn leaf aphid): 113556120
Entry
113556120         CDS       T06065                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 36
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    113556120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rmd03009]
    113556120
Ribosome biogenesis [BR:rmd03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    113556120
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd PEP5_VPS11_N Beta-prop_WDR75_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_LRRK2 WD40_RFWD3 eIF2A VPS8_N B-prop_COPA_B_2nd TAF1C_beta-prop Cytochrom_D1
Other DBs
NCBI-GeneID: 113556120
NCBI-ProteinID: XP_026816686
LinkDB
Position
3:37223959..37229688
AA seq 875 aa
MSSSKIFLQNRALGYVSNEIPLVTRYINLRRENLIITCVGRAFHTYSSDRFQLLSVSPQH
ETDITCLAADSYLVYTSCGNQIYAWRRGIELKHTYTGHKAAIKLLFPFAVNLVSIDESGA
LKIWDVKTESIYKEIQLDFTATAICHPPTYTNKLLIGSAEGKLQLWNIKTGTMIHEFKGW
NSCVTSLEPAPAEDMMAIGLSNGKIILHNLKFDVTNISFTQDWGSVTRISFLIKRQLMIT
GSPKGTVVVWNLEEGKVDSLIIKAHHGPVCGLQCLPDEPLLVTSSSDNSLKMWRFDMSDG
SASLFKIREGHFKPPVSIRFHGVDGASILSSGNDSSLRVFNTITEIANKSFGRASYNRKA
SKKKNKWADPLIMPPISTFTSETTRDKEWDSIVAVHRGIPTVTTWSFDKSKMGEHKLCHE
RFKKNVSGQKGISATCACLTHCGNFAVIGYSSGHIDKYNIQSGLHRGTYGQPIAHKYVRG
VYVDTLNQIMVSGGSDTFLQFWNFKKLNLLSKMELEDTVSLFSWHTESSFLAVALDNYDI
CLVDIDTRTIVRKFTGHRGPLTDMAFSPDSRWLVTSAMDSTIRTWDIPSSSMIDILKVDT
PCVSLTFSPTGSYLATAHADRLGIYLWFNKTLYNHVSLRPITEEDQITEPLPLTGINQES
LECPIDEDTDEYISKVQIENTITMSGLNDARWQSILNLDAVKKRNKPLQPPKAPAAAPFF
LPTIQSLDFQFDLKGVDKNDSNTKVIPETLMQTVFAQQLLKASSLNDYQVLFDQLKLMGP
SALNYEVRSLSPEAGGTYELMVKFLELLKQTSTNNKDFELSQSYLGVFLKYNGRALAQRP
EAINSIEQLSKHNAWEQLQDNFLLCLSIVEYMKNN
NT seq 2628 nt   +upstreamnt  +downstreamnt
atgtcgtccagtaaaatattcttgcagaaccgagctctcgggtatgtcagtaatgagatt
ccacttgttacccgctacataaacctcagacgagaaaatctcataatcacatgtgttgga
cgtgcttttcacacatacagttctgataggtttcagcttctatctgtaagcccacaacat
gaaacagacatcacttgtttggctgcagatagttacctagtatatactagttgtggaaac
caaatatatgcatggcgacgtggtatagaactgaaacacacatatacaggtcacaaagca
gcaataaaattattgtttccatttgctgtcaatttagtgtctattgatgaatcaggagct
ctcaaaatttgggatgtaaaaacagaaagtatttacaaagaaattcaattagactttact
gcaacagctatatgccatccaccaacttatactaataaattattaattggctcagccgaa
ggaaaactacagctatggaacataaaaacaggaaccatgatacacgagtttaagggttgg
aatagttgtgtaaccagcttagagccagctccagcagaagatatgatggcaataggattg
agtaatggaaaaattattttgcacaatttaaaatttgatgtaaccaacataagttttaca
caagattggggctctgttacacgtataagttttcttattaaacgacaattaatgataact
ggtagcccaaaaggcactgtagtagtttggaatcttgaagaaggaaaagttgacagctta
atcattaaagctcatcatggaccagtttgtggtcttcagtgtttaccagacgaaccgctt
cttgtaacttcatcttctgacaattctttaaaaatgtggcgttttgacatgtctgatggt
tcggctagtctgtttaaaatacgtgaaggtcatttcaaacctccagtttctattcgtttt
cacggagtagatggtgctagtattttgagttctggcaatgattcatcattgcgtgtcttc
aatacaattactgaaattgcaaataagagttttgggcgtgcgtcatataaccgtaaagct
tcaaaaaaaaagaataaatgggccgatcctcttataatgcctccaatatctacattcaca
tcagaaactactagagataaagaatgggacagcattgttgccgtacatagaggtatacca
actgtaactacttggtcatttgacaagagtaaaatgggagagcataaattatgccatgaa
agatttaagaaaaatgtcagtgggcagaaaggaatcagtgctacatgtgcatgtcttaca
cattgtggtaattttgcagttattggttatagttctggtcacattgataagtacaacatt
cagtccggcttacacagaggaacctatggacaaccaatagcccataaatatgtacgcgga
gtctacgtagatacacttaatcaaataatggtatctggtggttcagatacatttttacaa
ttctggaatttcaaaaaattaaatttattgtctaaaatggagttggaagataccgtttca
ttgtttagctggcacacagaaagttcatttctagcggttgccttagataattatgacatt
tgtcttgttgatattgatactcgaacgattgtaaggaagtttactggtcatcgaggtcca
ttaactgatatggcatttagtccagattccagatggttagttacatcagcaatggattca
actattcgcacttgggacattccatcatcatcaatgatagatatacttaaagttgataca
ccttgtgtttcattgacattttctccaactggaagttatctggctacagcgcatgctgac
cgtttgggaatatatttatggtttaataaaacattatacaatcatgttagtttacgaccc
atcactgaagaagatcagatcacagaacctcttccattgactggaattaatcaagaatct
ttggaatgccctattgatgaagatacagatgaatatatctctaaagtgcaaattgaaaac
accattactatgagtggcctaaatgatgctagatggcagagtatattaaatttagatgct
gttaaaaaaagaaacaaaccattacaaccaccgaaagctccagctgctgctccatttttc
ctacctactatacaatcactggactttcaatttgatttaaaaggagttgataaaaacgat
tctaataccaaagttattccggaaacattaatgcaaacagtttttgctcaacaactttta
aaagcctcttcattaaatgattatcaagttttatttgaccagttaaaattaatgggaccg
tcagctttgaactatgaagtacggagcttgtctcctgaagctggtgggacatatgaacta
atggttaaatttttagagcttcttaaacagacatctacaaataataaagattttgaattg
tcacaatcatatttgggcgtatttttaaaatataatggacgtgcattggctcaacgacca
gaagcaatcaatagtattgagcagttatcaaaacataatgcatgggagcaattgcaagat
aattttttgttatgtcttagtattgtagaatatatgaaaaataattaa

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