Rhopalosiphum maidis (corn leaf aphid): 113556132
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Entry
113556132 CDS
T06065
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113556132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113556132
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113556132
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113556132
NCBI-ProteinID:
XP_026816702
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All DBs
Position
1:78405520..78406718
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AA seq
211 aa
AA seq
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MSEDFLKCQLGFLGNTEGSAYLSQGKSTVSVSVVGPFEPKASKCMYDRATVDVTFRRKTG
SITVHDKMLEGIMQSTCEKSLVVEQYPRTTIVVTVQEMQDRGNLLSTCLNASCMALMNSG
IAMHHLYAAVSCAVTENQEIILNPDESQINSSVAYFTLVFANSETRFLLTSHTTGKFSQK
TYMECMNKCYTASKEVFNFYENVIKKSYIFN
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagattttctgaagtgccaactaggctttttaggaaacaccgaaggctcagca
tatttatctcaaggtaaaagtaccgtttctgtgtcggttgttggaccatttgaacccaaa
gctagtaaatgcatgtatgaccgtgctaccgtggatgtgacttttagacgaaaaactgga
agcataactgttcatgacaaaatgttagaaggtataatgcaatcaacatgtgaaaagtcc
ctagttgttgaacaataccctaggacaacaattgttgtaacagtccaagagatgcaggat
agaggaaatttattgtccacttgcttgaatgcttcttgtatggctttgatgaattctggt
attgctatgcatcatttatatgcagctgtgagttgtgcagtcaccgagaaccaagaaatc
attctcaatccagacgaatcacaaataaattcttctgttgcatattttacactagtgttt
gcaaactctgaaaccaggtttctgttaacatcacatactactggaaaattctcacagaaa
acatatatggaatgtatgaacaaatgttatacagctagtaaagaggtttttaatttttat
gaaaatgtcataaaaaaaagttatattttcaattaa
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