Rhopalosiphum maidis (corn leaf aphid): 113556147
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Entry
113556147 CDS
T06065
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113556147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmd03021
]
113556147
03041 Spliceosome [BR:
rmd03041
]
113556147
03036 Chromosome and associated proteins [BR:
rmd03036
]
113556147
Transcription machinery [BR:
rmd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
113556147
Spliceosome [BR:
rmd03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
113556147
Complex B
113556147
Complex C
U2 SnRNP specific factors
113556147
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
113556147
TFTC complex
113556147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
GtgE
Motif
Other DBs
NCBI-GeneID:
113556147
NCBI-ProteinID:
XP_026816717
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All DBs
Position
3:45746741..45764170
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AA seq
1218 aa
AA seq
DB search
MYLYNMTLQRGSGITHAIHGNFSGGKAQEILVSRGKSLELMRPDANTGKVHTLLTVEVFG
IIRALMSFKQSGGTKDYIVVGSDSGRIVILEYLPSKNVLDKVHQETFGKSGCRRIVPGQY
LAIDPKGRAIMIGAVEKQKLVYIPNRDGEARLTISSPLEANKSHTLVYHMVGVDVAFDNP
IFACLEIDYEEADADPTGEAVQATKQTLSFYEVDFGLNHVVRKCSEPLEEHANSLITVPG
DKDGPGGVLICSENYITYTNLGDQPDIRCPIPRRRNDLDDPERGMILVCSATHKTKSMFF
FLVQTEQGDVFKVTLDTNEEFVTEIKMKYFDTVPVATAMCVLKTGFLFVASEFGNHYLYQ
IANLGDDDDEPEFSSAMPLEEGDTFFFAPRQLRNLVLVDEMDSLSPIMACQVADLAAEDT
PQLYMACGRGSRSTLRVLRHGLEVSELAISELPGSPNAVWTVKRSAKENFDAYIIVSFTN
ATLVLSIGETVEEVSDSGFLGTTPTLSCSPLGDDAVVQIYPTGVRHIRSDKRMHDWKAPE
KKKIVKCAANQRQVVIALSGGELVYFEMDPSGHLNEHKERKEMNSDVLCMALANAPSGEH
MSRFLAVGLIDETVRIISLDTTDCLIQLKMQAIPAMPESLCIVEMGTSDGGSLDEPEMTS
LSTLYLNIGLQNGVLLRTILDGVTGEMADTRARYLGGKPVKLFKIRTRGNEAVLAMSSRS
WLNYYYQNRFHLTPLSYESLDYASGFSSEQCPEGVVAISNNTLRILALEKLGAVFNQVSF
PVEYTPRKFVIHSDSDHLIVIETEHNAYTEQTKKQRRIQMAEEMKEAAGEEEQEIAKEMA
ETFLNEDLPENIFGAPKAGSGMWASLVRLFDPVQGITEAVYRFPQNEAVMSVALIRFSND
PESQFVLFGVANELHLNPRHVTSGFIYTYKINPTCTSLELVHKTTVDDVPTAICGFQGRV
IIGIGRILRLYDLGKKKLLLKCENKQIPILIVGIRVMGCRIYVSDVQESVYMVRYKRDEN
QLLIFADDTQPRYITAMEILDYNTVATADKYGNISVVRLASSISDDVDDDPTGNKSLWDR
GLLNGASQKADFTVNFHIGEICTSLQKATLIPGGSESLIYATVSGTIGILVPFTAPEEQD
FFQHLEMHMRSENPPLCGRDHLSYRSYYFPVKNVCDGDLCEQYNSIDIAKQKSIAADLDK
TPAEVSKRLEDIRTRFAF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtataatatgacattgcaacgtggtagcggcattacgcatgctatccatggc
aattttagtggtggaaaagcacaagaaattttagtatctcgtggaaaatctttagagctt
atgagacctgatgcaaatactggaaaagtccacacattgctaactgttgaggtatttgga
attattcgtgctttgatgagttttaagcaatctggcggtactaaagattacatagttgtt
ggttctgattctggaagaattgttatattagaatatttgccttcaaaaaatgtcttggat
aaagtgcatcaagaaacttttggaaagagtgggtgcaggcgaattgttcctgggcaatat
ttggctatcgatccaaaaggaagagctataatgattggcgcggtagaaaagcaaaaatta
gtatacattcctaacagagatggtgaagcacggcttacaatttcatctcctttggaagct
aataaaagccatacacttgtgtatcacatggttggagttgatgtagcttttgacaatcca
atttttgcctgccttgaaattgactatgaggaagctgacgcagatccaactggagaagct
gttcaagctacaaaacagactctttcattttatgaagttgattttggtttaaatcacgta
gttcgtaaatgtagtgaacctttagaagaacatgctaattctcttattactgttcctggt
gataaagatggacctggtggtgtacttatttgttcagaaaattatattacttatacaaat
ctaggagatcaaccagacatacgatgtccaataccacgtagacgtaacgatttggatgat
cccgaaagaggaatgatcttagtatgtagtgctacacacaagactaaatccatgtttttc
ttcttagttcaaacagaacaaggcgatgttttcaaagtaacattagataccaatgaagag
tttgttacagaaattaaaatgaaatattttgatactgttccagtagctactgctatgtgt
gttctaaaaactgggtttttatttgtagcatcagagtttggtaaccattacttatatcag
atcgcaaatttgggcgatgatgatgacgaaccagagtttagttcagcaatgcctcttgag
gagggagatacatttttttttgctccaagacaattgaggaatttagtgttagttgatgaa
atggattcattgtcacctataatggcttgtcaagttgctgatttagctgctgaagatacc
ccacaattatatatggcttgtggtcgaggttcaagatctaccttgagggttttaaggcac
ggtcttgaagtttctgaattggcaatttctgaactacccgggagtccaaatgcagtatgg
acagtgaaaagaagtgcaaaggaaaactttgatgcctatatcattgtatccttcacaaat
gccactctagtattgtctatcggagaaactgtggaagaagtttccgattcaggtttctta
ggaactacgccaacactatcttgttctccattaggcgatgatgctgttgtacaaatttat
cctactggtgtgcgccatattcgttctgacaaaagaatgcatgattggaaagctcctgaa
aaaaaaaagattgttaaatgtgctgctaatcaacgacaagttgtgattgctcttagtggt
ggtgaacttgtatattttgaaatggatccgtctggacatttaaatgaacataaggaacgt
aaagaaatgaattctgatgtcctttgtatggcattagcaaatgccccttcaggggaacat
atgtcacgctttttagctgttgggttgattgatgaaacagttcgtatcatttctttagat
actacagattgtttaatacaattaaaaatgcaagcgataccggctatgccagaatcgtta
tgtattgtagaaatgggtactagtgacggcggttctttggatgaaccagaaatgacttca
ctatcaacactttatttgaatattggtttacaaaatggtgtactacttcgtactatcctg
gatggtgttactggagaaatggctgatacacgtgcacgttacttaggaggcaaacctgta
aaactgtttaaaatcagaacccggggaaatgaagctgtactggccatgtcaagtagatca
tggcttaattattactaccaaaatcgttttcacctaactccattatcatatgaaagttta
gattatgcgtctggtttttcttctgaacagtgtcctgaaggtgtagtcgctatttctaat
aataccttgcgcattttggcccttgaaaaattgggtgctgtattcaaccaagtttcattt
cctgttgaatatactcccagaaaatttgttattcactctgattctgatcatttaattgtg
attgaaactgaacacaatgcatacaccgagcaaaccaaaaaacagaggcgaatacaaatg
gcagaagaaatgaaagaagccgccggtgaggaagaacaagaaatagctaaggaaatggct
gaaacttttttgaatgaagatttaccagaaaatatttttggtgctcccaaagctggttct
ggaatgtgggcatcattagtcagattgtttgatccagttcaaggtataacagaagccgtt
tataggtttcctcaaaatgaagctgttatgagtgttgctctaattcgtttttcgaatgat
ccagaatcacagtttgttctttttggtgttgcaaatgaacttcatttgaacccaagacat
gtcacttctggatttatctacacttataaaattaaccctacatgcacttctttggaattg
gttcataagactacagttgatgatgtaccaactgcaatatgtggattccagggacgtgtg
ataattggtattggtagaatcttacgactttatgaccttggcaaaaaaaaactcttactg
aaatgtgaaaataaacaaataccaatattaatagttggaattcgtgttatgggctgtaga
atatatgtgagtgatgttcaagaaagtgtgtatatggtacgatataagcgtgatgaaaat
caattacttatttttgctgatgatacacaaccgagatatattactgcaatggaaatactt
gattataatacagttgctacagctgacaaatatggaaatatttcagtggttcggctagca
tcatcaatatccgatgatgttgatgatgatccaacaggtaataaaagcctgtgggatcgt
ggattacttaatggagcttctcaaaaagctgattttactgtgaattttcatattggagaa
atttgtacttcattacaaaaagctacattaatacctggtggttctgaatctcttatttat
gctactgttagtggtactattggtattctcgtgccatttactgcacccgaagaacaagac
tttttccagcatcttgaaatgcatatgagatctgagaacccaccactttgtggaagagat
catttatcatatcgatcttattatttccctgtaaaaaatgtttgtgatggagatttgtgt
gaacaatataattctattgatattgccaaacagaaaagcattgcagcagatctcgacaag
actcctgctgaagtgtcgaaaagacttgaggacattagaacaagatttgcattttaa
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integrated database retrieval system
