Rhopalosiphum maidis (corn leaf aphid): 113556312
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Entry
113556312 CDS
T06065
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein Nova-1
KO
K14944
RNA-binding protein Nova
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113556312
Spliceosome [BR:
rmd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113556312
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
113556312
NCBI-ProteinID:
XP_026816979
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Position
1:64457454..64508519
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AA seq
655 aa
AA seq
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MQFLTGTSQTSAGGGGMFGGADGAELYAATASAPDHYFCQRMLYAMQFDSVAAAGAGMCS
PLLPSSLSSPPSPPSSSSPLSSSSPSSLSSSSSSSSSSSPLSLSSPLSLALTPSIGGRCF
TTTAAAGDVKMMDACPASPVNDHHLHHHLHHHHLQLQQQHAVENRKRPLQDTLDGANVKR
THCSSVTGNSDGMYHMKILIPCITAGAIIGKGGETIAQLQTETNTKIKMSKTNDFYPGTT
ERVCIISGSSSEHIMAALTFIMERIREKPDASNRVQNSGDAIADREKQVKILIPNSTAGM
IIGKAGAYIKQLKEDSGCFVQISQKAKDTTLQERCITVSGNTEGNKKVCLCILNKIIEDP
LSASCPNLSYADVNGPVANFNPTGSPYALATTNCSNNQTSYNLNTTSLSAQDVSNGIFTN
KFLDNVKPLLRSSGYPESAVNEIAIAFLTLAKHNVLSPNSIIGLINQTSILQPAPSVPHH
NGTGLLSTVTNDLFDLGLAGGAISINAILSQNAASPTLSNANSYGLGVAAAAAAAAAAAS
TPKAIGPTTNAAAAAAAAAAAALYEMTADDQQSVKREMDVPESIVGAIIGPGGRSLVEIQ
QMSGVTIHISKKGVYAPGTTNRKVTICGSASGIAMANYLMQQRIVDEETKRARAF
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttttgaccggtacatcgcagacgagtgccggcggtggcggtatgttcggcggc
gccgatggcgcggagctgtacgcggccacggcgtcggcgcctgaccattacttttgccag
cgaatgttgtacgcgatgcagttcgattcggtggccgcggccggcgccggtatgtgttcg
ccgctgttaccgtcgtcgttgtcgtcgccgccgtcaccgccgtcgtcgtcgtcgccgtta
tcgtcatcatcgccgtcgtcgttatcgtcgtcgtcttcgtcgtcgtcgtcgtcgtcgccg
ttatcgttgtcgtcgccgttatcgttggcgttaacgccgtcgatcggcggtcgttgcttc
acgacaaccgccgccgccggagacgtgaaaatgatggacgcgtgcccggcgtcaccggtt
aacgatcatcatcttcatcatcatctacatcatcaccatcttcagctgcagcaacagcac
gcggtcgagaacaggaaacgtccgttacaggacacgttggacggcgcaaatgtcaaaaga
actcactgttcgtccgttacaggaaattcagatggaatgtatcacatgaaaattttaatt
ccttgtataactgctggtgccatcataggtaaaggtggggagactattgcgcagctacaa
acagagaccaatactaaaataaaaatgtcaaaaacaaatgatttttatcctggcacgacc
gaaagagtttgcataatatctggatcaagttccgaacatataatggcagctcttacattt
attatggaacgaatccgggaaaaaccagatgcatcaaatagggttcaaaattctggtgat
gcaatcgcagatcgagaaaaacaggtgaaaatcctaatacccaactcaacagcgggtatg
attattggtaaagccggagcgtacatcaaacagttgaaagaagacagcgggtgttttgtg
cagatatcgcaaaaagcaaaagacactacactccaagaacggtgcattaccgtgtcaggt
aacacggaagggaacaaaaaagtgtgcttatgcatactaaacaaaataatcgaagatccg
ttgagtgcgtcctgtccgaatttaagttacgccgacgttaacgggccggtggcgaatttc
aatcccacgggatcgccgtatgccctggctaccacaaattgctccaacaatcagaccagt
tacaacttaaataccacatcgttatccgcacaggatgtcagtaatgggatattcacgaac
aaattcttagacaacgtaaagccgttattgaggtccagtggatatcctgaatccgcagtc
aatgaaatagccatcgcctttttgacgttagccaagcacaacgtactcagcccgaacagc
ataatcggactgatcaaccaaaccagcatcctgcagccggccccgtcggtgccgcaccac
aacggcactgggctcctgagcacggttaccaacgacctgttcgacctgggcctggccggc
ggcgcgatatccatcaacgcgatcctgtcgcagaacgcggccagcccgacgctatccaac
gccaactcgtacgggttaggcgtggcggcagcggcggctgccgcggccgcggccgcatcc
acgcccaaggcgatcgggccgacgacgaacgcggcagccgcagcggcagcggccgccgcg
gctgccctgtacgagatgaccgccgacgaccagcagtccgtcaagcgggagatggacgtg
cccgagtcgatcgtgggcgccatcatcggccccggcggccggtcgctggtcgaaatccag
cagatgagcggcgtcaccattcacatatccaagaagggcgtgtacgcgccgggcaccacc
aaccggaaggtgaccatatgcgggtcggccagcggcatagcgatggccaattacctcatg
cagcagaggatcgtcgacgaggagaccaagcgggcccgcgcgttctga
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