Rhopalosiphum maidis (corn leaf aphid): 113556444
Help
Entry
113556444 CDS
T06065
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113556444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113556444
03036 Chromosome and associated proteins [BR:
rmd03036
]
113556444
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113556444
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113556444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
113556444
NCBI-ProteinID:
XP_026817197
LinkDB
All DBs
Position
1:complement(28867769..28878120)
Genome browser
AA seq
1566 aa
AA seq
DB search
MIGSGSGAFSGGAGNTSGFGQSAFGKPTAPAVFGQTNTSLFNQTTQPNTGLFGSTAAAPA
FGQTPTAQPSFGGFNTGGASLFGTPTATSVSTGGLFGQQNASMGGNTGGGLFGSSNPNTS
FGQSKPVGTGFSFGTPVAQQTGNIFGTPQTSTAGTGMFGASTTGTFGATSGFGATSAGGT
TIKFNPVTGTDTMVRNGVNQTINTRHQSITVMKEYETKIFEELRFEDYSANRKVGQQGAV
GGGIFGSPKTLFSSTTTTSTGLFGANDNKPLFGATSTTPTLGGFGNTGTSNVFGAQNSLF
GKPQQTTPAFGTQPSTQAFGMSTAQPNIFGSNTAQTAKPFGVAAPQTNIFGSTAPSTFGT
QTTGFGQTGFGQPNQNNLFGQNKPAFGLGSTQTTTGFGFGTNTSTSANGLFGSKPANTGF
QMTTPAFGTNNAFGATSTAQPATGGLFGSNAFNKAPTTSLFNQPTNQQTGVFNNAAKPGG
LFGQGTQGTGLFGSSNSNNFGSGGTSFFGSNQSSGIGLFGNSNNVQLSTNQVSQSNQMQL
QLDTLKAMPYGDSPLFKRFYKDVSKVDDSSLVRSQSVSLEKFGSYKVSPIPTPKRIPQIR
RNFPQFNRKSLFDGLEESPPTMKCRDKVGDNSLLFNASSPRSGCKKLNLKKDYNDCSKLN
NGNSMIMHTKPLAKLELYFSNKQVSPDDSSNTVNLSLIEENNTISQLKNNKQINLNTSKG
TEVYETSRNNITDAVVIDNQEPSIDSSTPEAEDHPTGIKLRRVGYYTIPPMNELAELVDD
DGSCFVDGFTIGRYDYGNVYFPDRLNVAGLDLDTIVHIRHREIIIYQDDELKPPLGEGLN
RKATVTLDRVWPNDKTTKQPITNPDRIAATNFVVKLQRACAKLSTQFVDYRSDTGSWVFN
VEHFSKYALIDSDDEDEDIVLDRSVDSKTLPKPILQKPKTIKSTENISPKQNVMKPLLDL
SAGLDRAQLPHQYLLKPNFQLSTVSELTNDSHIMHYYDMNKENSINVTAQLSQHMNLQAS
KIQCMKASFDDIFYNELMEQDDDTYGQKDKFEDKLEKILETIPECLISPKTQDNISKSKS
IITPVDNQVSPKFLITKQKNKVVQVVESLKPVLTAPLQAQRFNLIYDSNVRLPFEVEFNN
TCESSKLSLLNTLSMKVPWSGNLTFITLNTKSKGSFLPTKGLDIGYLSTELSGRGKNDYS
STILQKLQIITPVKTETFIELLTEHLEICMMNSNCDAKNNNIPYFYPTFGVDALHSHCYL
LSHFSELPEEEHYSHVWELIKALWGDPENLYTKDYPQEHVYNMARRQAVSDWLENVLEKT
VDSNNADENVSQKILNLVSVHKIMEACDLAISNNEFNLAMLLAQLGSENSVRCCIQRQLW
QWFNSKADLFIDIDHLKLYTMISGQPLFDSNQGIVNVCENLNWIRAFAIHMWYIQPPSST
IRDVLDAYQSSFESDDSYAFKPYKTYDGIIDIDDKFATYDICYHLMKLYTDSAYQMDKII
NPFTHTRDPMDYNFCWLLYNTLQSLGYTQMSESYANQLHINFASQLVSHGQWQWAVFVLM
HIKTNT
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgataggttctgggtcaggagcattttccggtggggccggaaacacatcgggatttggt
cagtcggcatttggtaagcccacagcacctgcagtgtttggccaaacaaatacatcattg
tttaatcagactacacagcctaatacaggattgtttggatctactgctgctgcgcctgca
tttggtcaaacgcctaccgctcaaccatcatttggaggtttcaatactggtggagcgtca
ttgtttggaactcctacagcaacatctgtgtctacaggagggttatttggtcaacaaaat
gcttcaatgggaggaaatactggaggtggattatttggttctagtaatcctaatacttca
tttggacaatcaaaaccagttggaacaggattctcttttggaacaccagtggcacagcaa
actggtaatatattcggtacacctcaaacaagcactgcaggcactggaatgtttggcgcc
tctactactggtacttttggtgctacatctggttttggagcaacatctgctggtggaaca
accataaaatttaatcctgtgactggtactgatacaatggtcagaaatggtgtaaatcaa
acaattaatactagacatcaatcaataactgttatgaaagaatacgaaacaaaaatattt
gaggaactaagatttgaagattattctgcaaaccgcaaagttggacaacagggtgctgtt
ggcggaggaatttttggatcccctaaaactttatttagttctacaacaactacaagtaca
ggtttatttggagcaaatgataataaaccactttttggtgcaacttcaacaacacctaca
ttaggaggatttggaaacactggtacttcaaacgtttttggtgcacagaatagcttattt
ggaaaacctcaacaaacaacaccagcatttggtactcaaccatctactcaagcgttcggt
atgagtacagctcaaccaaatatttttggatcaaatacagctcaaacagctaaaccattt
ggagttgctgctcctcagacaaatatatttggaagtactgctccttcaacttttggtact
caaactacaggatttggccaaactggtttcggacaacccaatcagaacaacttatttggt
caaaataaaccagcatttggtcttggatcaacacagacaacaacaggttttggttttgga
actaacacatctactagtgcaaatggtctttttggaagtaaacctgctaatactggattt
caaatgactactccagcttttggtacaaacaatgcttttggagctacgtcaacagctcaa
ccagctactggtggtttatttggctctaatgcttttaataaggcaccaactacatcatta
tttaaccaaccaacaaatcaacaaacaggtgtatttaataatgctgcaaaacccggaggg
ctgtttggccaaggaacacaaggaactggactttttggatcatctaactctaataatttt
ggttcaggcgggacatcattttttggtagtaaccaatctagtggaatcggactttttgga
aattccaataatgttcagctatctaccaatcaagtatcacaaagtaatcaaatgcaatta
caattagatacattaaaagcaatgccatatggagattcacctttgttcaaaagattttat
aaggatgtatcaaaagtagacgactcatctcttgtacgatcacaaagtgtatcacttgag
aagtttggtagctataaagtttctccgataccaacaccaaaaagaatacctcaaattcgt
agaaatttccctcaatttaatcgtaagtccttatttgacggacttgaagaatctccgcca
acaatgaaatgcagagataaagtaggggacaattcactactatttaatgcttcttctcca
agatcgggctgtaagaaattaaatttaaaaaaagactacaatgactgtagtaaattaaac
aatggaaatagtatgattatgcatacaaaaccacttgctaaattagaattatatttttct
aataaacaagtctcgccagatgatagttcaaatactgttaatttgtctttaattgaagaa
aacaatacaatttctcaattaaaaaacaataaacaaatcaatttgaatacttcaaaagga
acagaagtctatgaaacttctcgaaataatattactgatgctgttgtcatcgacaaccaa
gaaccttcaattgattccagtactcctgaagcagaagatcatcctactgggataaagtta
agacgtgttggatattacactattccacctatgaatgaattggcagaattagtagatgat
gatggatcatgttttgtggatggtttcacaattggacgctatgattacggaaatgtatat
tttcctgatcgtcttaatgttgcaggtctagacttagatactatagtacatataagacat
agagaaattataatttaccaagatgatgaacttaaaccccctctaggagagggattaaat
agaaaggctactgttactttagatagagtctggcctaatgataaaacaacaaaacaacca
atcactaaccctgatcgtattgcagctacaaattttgttgttaaacttcaaagggcatgt
gccaaattaagcactcaatttgtagattatcgttcagacacaggatcttgggtgtttaat
gttgaacatttttcaaaatatgctcttatagattctgatgatgaagatgaggatatcgta
ctggatcgtagtgttgattctaaaactcttcctaaaccaattttacaaaaacctaaaact
ataaaatcaacagaaaacattagcccaaaacaaaatgttatgaaaccattactagatctt
tctgctggtcttgatagagctcaattaccacatcagtatttattaaaaccaaactttcag
ctctctactgttagtgaattaactaatgattcacatattatgcattattatgacatgaac
aaagaaaatagcattaatgtaactgctcagctatcacaacatatgaatttacaggcatca
aaaatacaatgcatgaaagcttcatttgatgatattttttataatgagttgatggaacaa
gatgatgacacttatggacaaaaagataaatttgaagacaagttagaaaaaatcttggaa
acaattcctgaatgtttaattagccctaaaactcaagataatatttccaagtcaaaatct
ataataactccagtagataatcaagtatctccaaagtttctcatcacaaaacaaaaaaat
aaagttgttcaagttgtcgaatcattaaaaccagttttaaccgccccacttcaagctcaa
cggtttaatttaatatatgattctaatgtccgactaccatttgaagtagagtttaataat
acatgcgagtctagtaaactgtcattattaaatactttatcaatgaaagttccttggtca
ggcaatttaacatttattactcttaataccaaatctaagggaagttttttaccaacaaaa
ggactggatattggttatttatcaacagagttgtctggacgtggaaaaaatgattattct
tctacaattttacagaagttacaaattataacccctgttaaaactgagacattcattgaa
ttattgactgaacatttagaaatttgtatgatgaatagtaactgtgatgctaaaaacaac
aacattccatacttttatccaacatttggagttgatgcattacattctcattgttatttg
ttgtctcacttctctgaactacctgaagaagaacactattctcatgtatgggagttgatt
aaagcattgtggggagatccagaaaatctgtatactaaagactatcctcaagaacacgta
tacaatatggctagacgtcaggcagtgtctgattggctagaaaatgtattagaaaaaaca
gtagattctaataatgctgacgagaatgtctctcaaaaaatattaaatctagtttcagta
cataaaattatggaagcttgtgatttagcaatttctaataatgaattcaatttagcaatg
ttattagcacaattaggaagtgaaaattctgtcagatgttgcattcaacgacaactttgg
caatggttcaatagcaaagctgatctgttcatagatattgatcatcttaagttgtacact
atgatttcaggtcaacctttattcgattccaatcaaggaatagttaatgtttgtgaaaat
ttaaactggataagagcttttgctatacacatgtggtacatccaacctccatctagtact
attagagatgtactagatgcatatcaaagttcatttgaaagtgacgactcttatgctttc
aaaccatataaaacatatgatggcattattgatattgatgataaatttgctacttatgat
atttgttatcatttaatgaaactttacaccgattcagcataccaaatggacaaaattata
aatccatttactcatacacgggatccaatggattataatttttgttggcttttgtacaac
acattacaatctcttggctatacacaaatgtctgaatcatatgctaatcaattacatata
aattttgcttcgcagttggtatcacatggacaatggcaatgggccgtatttgttcttatg
catataaagacgaacacttga
DBGET
integrated database retrieval system
