Rhopalosiphum maidis (corn leaf aphid): 113556479
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Entry
113556479 CDS
T06065
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113556479
Enzymes [BR:
rmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113556479
Spliceosome [BR:
rmd03041
]
Complex C
Other components
Complex C specific factors
113556479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_19
Swi3
AAA_22
nSTAND3
Herpes_ori_bp
ResIII
FtsK_SpoIIIE
Reprolysin
Cas3-like_C_2
ABC_tran
TrwB_AAD_bind
AAA_29
T2SSE
Motif
Other DBs
NCBI-GeneID:
113556479
NCBI-ProteinID:
XP_026817246
LinkDB
All DBs
Position
3:complement(21989626..21996319)
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AA seq
682 aa
AA seq
DB search
MSSFRFKNCDEKPGYGEEDSNFESAISSSFVYNPYMSLDLQSQRNKLPITKYRNEVLYLC
EKFQTLILVGSTGSGKSTQVSQMLLDSGLCQNDKSIVITEPRKISAITLATRVAQEQKTN
LGQLVGYSVRFDNCCQPSTKIKYITEGILLNEMMSNPLLVNYSVIILDEIHERSLMTDIL
MGLIKKVLKKRPTLRLIILSATLDSSQLKSYFNLNQSNDPCNDTATVLGIEGRSYPTKIY
YLKDPTPNYVEESINTVLKIQQSGVSGDILVFLTGKEEIMQAVNTLDDYNIKNANEKIKL
LPVPMHGTLTNDEQLKAFRPAPRGYRKVVFSTNIAETSVTISGIVHVIDCGFVKLKWFNS
KFGADSLIAVPISKASAVQRAGRAGRERPGKVYRLYTKESYQNLINATPPEMMRSDLTDV
TLQLKAIYINNVLRFPFLSPPPAKNLLYAMEMLKALEAIDEQGNLTNSFGTIMAELPLPA
KHSRILLKSGEMGCSSEIVSILAMLQLQDAFVRPKYGATIQKAKIQHRNFEVAEGDLLTL
LNVYNGFEKNLFSQQWCHRFFINYNELCKARKIRSHLIDLMRSSKIPLKSCKGNTRTIVK
SIASGLFKNAAYLHYTGVYRSVGLDEDLYFHPKSVLNYVNQPQWVLYDELLETTKTYIKN
LVEITPSLLLEVAPHYFSTPTL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttttcgatttaaaaattgtgatgaaaaaccaggatatggagaagaggattcc
aattttgagtctgctatatcctcttcatttgtttataatccatatatgtcattggattta
caaagccaaagaaataaattacctataaccaaatatcgtaacgaagttttatatctttgt
gaaaagtttcagacattaatattagttggatctactggtagtggaaaaagtactcaagtg
tctcaaatgcttttagatagtggtttatgccaaaatgacaaatcaattgttattactgag
cccagaaaaataagtgccataacattagctactcgagtagctcaagaacaaaaaacaaac
ctaggtcaactagtaggttattcagttagatttgataactgttgtcaaccaagtacaaaa
attaaatatatcactgaaggtattcttttgaatgaaatgatgagcaatcctttattagta
aattattctgtaataatattagatgaaatacatgaaagaagtttgatgactgatatttta
atgggactaattaaaaaagttttgaaaaaacgaccaactttaagactgataatattatct
gctactttggattcctcacaacttaaatcatattttaatttaaaccaaagcaatgaccct
tgtaatgatactgctactgttttgggtattgaaggaagatcctatcctacaaaaatctat
tatttaaaagatcctacaccaaattatgtagaggaatcaattaatacagtattgaaaatt
caacaaagtggtgtatcaggtgacattctggtgtttttaacaggaaaagaagaaataatg
caagcagttaatactttggatgattacaacattaaaaatgctaatgaaaaaataaaactt
cttcctgtacctatgcatggtacattaactaatgacgaacaactcaaagcctttcgtcca
gcacctagaggatacagaaaagtagttttttcaactaatattgcagagacgtcagttacg
atttctggaattgttcatgttattgactgcggatttgttaaactaaaatggtttaattct
aagtttggtgctgattcattaattgctgttcctatatccaaagcatcagcagtccaaagg
gctggccgtgcaggaagagaacgacctggtaaagtttatagattatacacaaaagaatca
tatcaaaatttgataaatgctactcctccggaaatgatgagatctgatttaactgatgta
actttgcaacttaaagccatatatattaataatgttttaagatttcctttccttagtcca
cctccggctaaaaatctcctatatgctatggagatgttaaaagctttagaagctattgac
gaacaaggaaatcttacaaattcatttggtactattatggctgaattaccattaccagct
aaacattcaagaatattattgaagtctggtgaaatgggttgttcttcagaaattgtgtct
atattggctatgcttcaacttcaagatgcatttgtacgtccaaagtatggagctacaata
caaaaagctaaaatacaacatagaaattttgaagtcgctgaaggagatctacttacttta
ttaaatgtttacaacggatttgaaaaaaatctattcagtcaacaatggtgtcatcgattt
tttataaattataatgaattatgcaaagcacgtaaaatccgttcacatttaatagattta
atgaggtcatcaaaaattccacttaaatcttgtaaaggcaatacaagaactattgtaaag
agcattgcatcgggacttttcaaaaatgctgcttatttacattatacgggagtatataga
tcggttggccttgacgaagatctttattttcatccaaaatctgttctgaattatgtgaat
caaccacaatgggtcctgtatgatgaacttctggaaactacaaaaacatacataaaaaat
ttggttgaaataacaccgtcgctgttattagaagtagctcctcattatttttctacgcca
acattataa
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