Rhopalosiphum maidis (corn leaf aphid): 113556480
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Entry
113556480 CDS
T06065
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein Dscam2
KO
K06767
Down syndrome cell adhesion molecule
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rmd04515
]
113556480
Cell adhesion molecules [BR:
rmd04515
]
Immunoglobulin superfamily
DSCAM family
113556480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
Ig_DSCAM-DSCAML_C
V-set_CD47
Ig_5
Ig_4
Ig_VEGFR-1-like_5th
Izumo-Ig
C2-set_3
DUF2852
Motif
Other DBs
NCBI-GeneID:
113556480
NCBI-ProteinID:
XP_026817247
LinkDB
All DBs
Position
3:63832816..64105877
Genome browser
AA seq
1681 aa
AA seq
DB search
MNSRVLRRDVIWLAVALLCVNQAALGYGGEEHGPRFVVEPPVSVFFSNATGARVECAAEG
TPRPLVRWQTVLDGSTVRGVRDLMHVDDNGTLVFLPFAEHQYMPDVHSVAYRCVAHSRAG
TIVSRTVQVRAEVIRNFEPIVRDTVTMPGNVAVFNCHIPGVSYNENHVLPESVAITSWVQ
DGVFNIFPSWEIDSKIIMIPKTGQLRIANVDENDLRHSYTCRIVNKLTGFTQESSTFGRI
YFESNRTMAPWSKSNDFTVHLVKQGDHLLLPCDVYGFPPPKVTWSSGTSTVVVTADTSAG
GGSGGRSKAPMNFLRLRSVQKTDSGNYTCTARNTAGSKSLQHQVIVTPDMSAHVVPALAD
IESGRSVSFTCITSAADDNQIVTWLKDGVPRKSSSSTPPTYTLNVDSVQKDDQGMYQCVV
TNKLNNEMAHSFAELRLSASKPTFKYKFIGHLLKPGPDVSLKCIAFGTPTPHITWKFDGN
DVSLSQMRISVSQYVTEIGDVVSHFNITKVQVEDGGLYECVVSNRAGKISHSAKLQVYGI
PVTKKIPKIIARAGQQLQMTCPISGYPIFNINWEKDNKRLPGGKLLNKRHKVFANGSIVI
ENVQKKTDAGTYYCEASNDKHMVRASVEVIVIEPPHIHPFTIGDGYHEGGRVGWQCFITK
GDGPLTIEWLKNNQSLDLASAPSLSVTYQNEYSSSVLIESIRLAHEGNYTCRATNPVATV
EHTVTLTVLVPPEWIIEPKDVNVVRDDQAEINCSASGHPKPTIKWKKGSSKDSDQFSDDV
MDNVTSDGTLVINKVTKKHEGYYACEANNEVGSPIISIIRLNVQDLPHIILPNTKYMSIN
GGVASMDCEATGDQPIHISWIKGSVQLNYKSSNLRYNVEEMYTDTSVKSKLIISKVSATD
SGRYVCVAENSLGKHEAAMELEIKVLGSPPDDLSCNVTTPNSVRLRWTDLNANNLMNDYV
QGYILTYSKVVPADDLINEYNEIEVFHNGDDATISNLDTDTEYVFSIKVNTIQGPGKSSK
PLICRTSESLPEAPAGLKSMLLSPNLALISWIPPKQPNGKIQQYTLYEREKINGMQGAVK
SQSFEPHVRQIQLSMFRHSSSYLWWITATNSVGESDKSRTASLSTVKSGGMPAAIGNFHG
KIQTKWHTNIDLPCITSGIPTPNVKWTFNSQPIDLLQSQRLVYDNFTLHLESVTSMDSGN
YTCTAWNVYGSENVTTSLLVVEPPKPPILGIVNVSWTNVTVNWTKAPNTYAVQQYLLSYK
YVNEPENMYTEISLPAHSNVFTLPNIKCGTTIAFSISASNRVGHGMQSRPFNVKTLQGKT
PIAPTQNEAIEQMMSGFLIHLQKWNAKYCPITHFSVYKRLTTEKEWTAVNENITPNGIYS
VETLSPSTNYNILVKCYNSAGMTSTMYTASTLTNYGANYDKEALSVNDKIMLTIYNIAVM
WPLAVALLLLIVISVSLIICYKYRHMYKKNQRHLEANNMILKNNSCSKSEIHSDAYETCT
PFKSKSTILTNDDSNYNEISPYATFQISPSKSPKRNKQYFCTNCGENLEICNCNRLYCSQ
ADYTNFLRRPIPKRVPSYSDNNNDDLKSQSSSIHEFYDIERNSKTCEPMKKPKRRLLPLP
DSRRGSSQNSRECRSTNLHETTFMMPIQHHGTYPHNDTDEEDNGTMSSGRGSRPVPYRVC
Y
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtcgcgtgcttagacgcgatgttatatggctggcagtcgcactgttatgcgtc
aatcaagcagctctaggatacggcggcgaagagcacgggccgcgtttcgtcgtcgagcca
ccggtgtcagttttcttttcgaacgccaccggggcccgggtggaatgcgctgccgaggga
acgcccaggccgctggtccgttggcaaacggtactcgatggttcgacggttaggggcgtc
agagatctaatgcacgtcgatgacaacggcaccctggtatttttgccgtttgccgaacac
cagtacatgccagatgtgcattctgtcgcatacagatgcgtggctcacagccgcgcggga
acgattgtctcccgaaccgttcaagtcagagctgaggtaataagaaacttcgaacccatc
gtcagagacacagtgacaatgcctggcaatgtggccgtcttcaattgccacatacctgga
gtgagttacaatgaaaatcacgtgttacctgaatcagtggcgatcacttcatgggtgcaa
gacggtgtgttcaacatatttccatcatgggaaatagattcgaaaattatcatgataccg
aaaactggccaattgcgtatagcgaatgtagacgaaaacgatctgagacacagctatacg
tgccgcatagtaaacaagctgacgggattcactcaggagagcagcacgtttggcagaatt
tatttcgagagcaaccgtaccatggcaccttggtcgaaatccaacgacttcaccgtccac
ttggtgaaacagggcgatcatctgttgttgccatgcgacgtatatggatttcccccgcca
aaagtcacatggtcgtccggaacgtccacggtggtggtgacggccgacactagtgccggc
ggcggaagtggcggacgcagcaaggcgccgatgaattttttgcgtttgcggtctgttcag
aagacggactcgggcaattacacgtgcacggccaggaacacggcgggatccaagagtctg
cagcatcaggtgatcgtgacgcccgacatgagcgcgcacgtagtaccggcattggcggat
atcgagtccggtcgatccgtgtcgttcacgtgtatcacatccgcagccgacgataaccaa
attgtgacctggttgaaagacggcgtacctcgcaagtccagttcatcaacaccacccact
tacacgctgaacgttgattccgttcaaaaagatgatcaaggcatgtaccagtgtgtggtc
actaataagctgaacaatgaaatggcacattcattcgctgaactcaggctaagcgcgtcc
aaaccgacatttaagtacaagttcatcggtcatttgttgaaacccggtcctgacgtttcg
ctcaagtgcattgcattcggcacaccaacgcctcacatcacctggaagttcgacggtaac
gacgtgtctctttcacagatgcgaatatcggttagtcagtatgtcacagaaatcggagat
gtcgttagtcatttcaacatcaccaaagtccaagtggaagacggaggtttgtacgaatgc
gttgtttccaaccgagcgggaaaaatatcacattcagcgaaattacaagtttatggtatc
cccgtgaccaagaaaattcctaaaataattgcacgggctggtcaacagctgcaaatgacc
tgcccaatatcaggatatccgattttcaacatcaattgggaaaaagataataagaggtta
cccggagggaaattgctgaacaagagacacaaggtatttgcaaacggctcgatagtcatc
gaaaacgtgcagaaaaagaccgacgcggggacgtactactgcgaggctagcaacgacaaa
cacatggtccgagcttcggtcgaagtgattgtaatagaaccaccgcacatccatccgttc
acgataggagacggttaccacgaaggtggtcgcgtcggatggcagtgtttcataaccaag
ggtgacggcccgctgacgatcgagtggctgaaaaacaaccagtcgctggacctagcgtcc
gcgccgtcgctgtcggtgacttatcagaacgagtatagcagctcggtgctcatcgagagc
atacgattggcgcacgagggaaattacacttgccgggcgaccaatcccgtggcgacggtc
gagcacacggtcacgttgactgtactcgtaccccctgaatggataatcgaacccaaggac
gtgaacgtagttcgagatgatcaagcagaaatcaattgttccgcatcgggacatccaaaa
ccgaccataaaatggaaaaaaggatccagtaaggattcggatcagtttagtgacgacgta
atggataacgtgacatctgacggtactttggttattaataaagtgacaaaaaaacacgaa
ggctactacgcgtgcgaagcaaataacgaagtcggctcgcccatcatttccataattcgt
ctaaacgtacaagacttaccacacattatacttccgaatacgaaatacatgtctataaac
ggcggggtggcatccatggattgcgaggcgaccggagaccagccgatacacatatcgtgg
atcaaaggctcggttcaactgaactacaagagctctaatctcagatataacgtagaggaa
atgtacaccgatacatctgttaagtcaaaattgattattagtaaagtgagtgccacagac
tctggaagatatgtttgcgtcgctgaaaattcattggggaaacacgaggcggctatggaa
ttagaaataaaagttttgggatctccgccggatgatctatcgtgcaacgtcactactcct
aacagtgtaagattgcgatggaccgacttgaacgcgaataacttaatgaacgactatgtg
cagggatatattcttacctactcaaaggtagtacctgcggatgacttaataaacgaatac
aatgaaattgaagtttttcataacggggatgatgcaacgatttccaatcttgatacagat
actgagtacgtgttttccatcaaagtaaacacaatccaaggaccgggaaaatcaagcaaa
cctcttatttgcagaacttcagaaagtttacctgaagcaccagctggtttaaaatctatg
cttttatcaccaaacctggctcttatatcttggataccaccaaaacaaccgaatggaaag
attcaacaatacacactttacgaacgagagaaaataaacggaatgcaaggtgccgtgaag
tcacagtcgttcgaaccacacgtccgacagattcagttgtccatgttcagacactctagc
agctatttgtggtggataaccgcaaccaacagcgtaggtgagagtgacaagtcgcggacg
gcttctttgtcgacggtgaaatctggcggaatgcccgcagccattggaaacttccacggt
aagatacagaccaaatggcacaccaacatcgatctgccttgtattacgtccggtattcca
actccaaacgtaaaatggacattcaatagtcaacctatcgacttattacagtctcagaga
ttggtctatgataactttacgttacacttggaatctgtgaccagcatggattccggcaat
tatacgtgtacagcatggaatgtttatgggtccgaaaatgttaccacttcgttactagtc
gtcgagccaccaaaaccgccaattctcggcatagtcaacgtgtcttggacaaatgtcacc
gtgaattggacgaaagcgccgaacacttatgcggtccagcagtatttactatcgtacaaa
tacgttaatgaacccgaaaacatgtacacggaaatatcactgcctgcacattcaaatgta
ttcacattaccaaatattaaatgcggaacaacgattgcgttcagcatttcagcaagcaac
cgtgtgggtcacggaatgcaaagcagaccatttaacgtaaagacattacaaggaaaaacg
ccaattgcacccacccaaaacgaagctattgaacagatgatgtctggatttttgattcat
ttgcaaaaatggaacgccaagtattgtccaatcacacatttttccgtgtataaaagatta
actactgaaaaagaatggacagcagtcaacgaaaacattacacctaatggaatttactca
gttgaaacgttaagtccttcgactaactataatattctggtaaaatgctataattctgcc
ggaatgacatcaacaatgtacactgcatcgaccctaactaattatggagcaaattatgac
aaagaagcgctatcagtgaatgacaagataatgctgactatttacaatatagctgtaatg
tggccactcgcagtagccttattgttactcatagtcatcagtgtatcattaataatatgt
tataaatataggcacatgtataaaaaaaatcaacgtcatttggaagcaaataatatgatt
ttaaaaaataatagttgttcaaaatccgaaatacactcggatgcatatgaaacgtgtaca
ccattcaagtcaaagagtaccatactaacaaatgatgattcaaactacaatgaaatatca
ccatatgcaacatttcaaatttctccttctaaatcgccaaaaaggaataaacaatacttt
tgtactaactgtggtgaaaatttggaaatatgcaattgtaatagattgtattgttctcag
gcggactacacaaactttttaagacgtcccataccaaaacgagtaccttcttattcagac
aacaacaatgacgatttaaaaagtcaaagtagttctattcatgagttttatgacattgag
agaaattcaaaaacatgtgagccaatgaagaaacctaagaggagattattacctttacca
gattctagacgtggatcgagtcagaattccagagaatgtagaagcacaaatttacacgaa
accacattcatgatgcctatacaacatcacggaacatatccccacaacgatacagatgaa
gaagataatggaactatgagctcaggccgtggttccagaccagttccatatagagtatgc
tattaa
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integrated database retrieval system
