Rhopalosiphum maidis (corn leaf aphid): 113556484
Help
Entry
113556484 CDS
T06065
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmd03400
]
113556484
DNA repair and recombination proteins [BR:
rmd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
113556484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_15
AAA_21
CCDC39
AAA_27
Rph_4th
FtsK_SpoIIIE
CheR_N
AAA
ABC_tran
Motif
Other DBs
NCBI-GeneID:
113556484
NCBI-ProteinID:
XP_026817249
LinkDB
All DBs
Position
4:complement(47670638..47678879)
Genome browser
AA seq
1044 aa
AA seq
DB search
MKNSASTSQSGDDSEVLNKKRKVDHMVDGSIVKVELKNFMTFTEVVYTPHSKLNLIIGPN
GSGKSSIVTALILGFGGNPKDINRGDKVSQFVKLGKSVADISIELYKRSNQNMNLRRTIF
ASNETCHYYVNSILVSKKKYIDVVESFNIKVHNLCQFLPQDRLEDFSKLDSKGLLINALQ
SIENKDLLINFEKLKTLADSINTYDGDKKKLQDSIRSETAVNLKLETIVNTFTEKKLLEE
QLLTVLQKRCWSLYILAWQQISSERKKFEESKKHNNAALSLINQHREIINNKKLGENNLK
NVVLQNANIVSKLIEKLSNQVGAAECHVSDLNDLKKTARKSSIKIEDLTESISVMEEKLQ
SIKNETLNVEECKLELNEINKNIKSIDSNIYPVRNNLESVKNKLKGLTEKMYGIDQELER
EKRKEDGKNQLLQRRFPEMWKAIKWLRNCDKSKIFHGQVFEPLFTQIEVHDQNNAKYIEN
IINYRDMIAFVFEYAEDLTTFNKIVKQERWQRINSISAPPANIHINETPNYDINSLRQFG
FHSYALDMIQAPTVIKRYLARNYDMQNIPIGSKEVINNLQNLPNNIGFFFAGNDQVHIKT
SNYTGEKITRQTQISNEAQFLLFSVDSNLIKSLTIKKEEARINCEHFEQQQIELNNQLRM
AEDSRQPFIARKKEIQGSFIKFQNRQQAYDKMIKDKEFKQSELKTEKERLTKLLNQNSQL
INKYFDSMNGVIVMLDSYSTSIKYLIASTFVVSNCHVDMEEENKVLKQLKKLYETNLNNF
NEYLKYIQKLDSEFKKMLDVAIHWSRGVSPYDKTLFQPFKEKFDDIEQSEVEDLDVLMVE
KKAKLNCLNIDPNAPQLIKEYKERKIKIKNLEKKLESLNQNAQTKEYEIDRLHSEWLPKI
QELTGLLSENFHKFLKSFGCSGIIELDIGITRYDFEAYGLLIKVQFRNDIPSLRLLDAKT
QSGGERALTTALFLLSLQEVTHFPFRIVDEINQGMDKVYERKLMELFMELFEDRKNQYFV
VTPKLIKNLTFKNTTVDIIFCIDK
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattccgcatcaacatcccaaagtggtgatgattcagaagttttaaacaaaaaa
cgtaaagttgatcacatggtcgatggttcaattgtcaaagtagaattaaagaatttcatg
acttttactgaagttgtatatactccacattcaaaactgaatttaataattgggcccaat
ggatctggaaaatcgtcaattgttacagctctcatattaggatttggtggtaatccaaag
gatattaatagaggagacaaagtcagtcaatttgtaaaactaggtaaatctgtagcagat
atttctatagaactttataagagatcaaatcaaaatatgaatttgagaaggacaatattt
gccagcaatgaaacttgtcactattatgtcaacagtatcttagtctcaaaaaaaaaatac
attgatgttgttgaaagctttaacataaaagtgcataacttatgtcagtttttaccacaa
gacagattagaagatttttcaaaattagattctaaaggtttattaataaatgctttacaa
agtatagaaaataaagacttattgatcaattttgaaaagttaaaaactctcgctgatagt
ataaacacatatgatggcgataaaaagaaattacaagatagtatcagatcagaaactgct
gtaaatctaaaattggaaacaattgtcaatacattcacggaaaaaaaattattagaagaa
cagttattgactgtgttacagaagagatgttggtccttatatatattagcttggcaacaa
atttctagtgaaagaaaaaaatttgaagaatcaaaaaaacataataatgctgccttgagt
cttatcaatcagcatagagaaataataaataataaaaaattaggagaaaataatctgaaa
aatgtggttcttcagaatgcaaatatagtaagtaaattaatagaaaaacttagtaatcaa
gttggagctgctgaatgtcatgtatctgatttaaatgatttaaaaaaaactgctagaaaa
agttcaataaaaattgaagaccttacagagtcaatatctgttatggaagagaagttacag
agtataaaaaatgaaacattaaatgttgaagaatgtaaattggaacttaatgaaatcaat
aaaaacatcaaaagcatcgattcaaatatttatcctgtgaggaataacttagagagtgtt
aaaaataaattgaaaggtcttactgaaaaaatgtatggtattgatcaagaacttgaaaga
gaaaaaagaaaagaggatggcaaaaatcaattactgcagagaaggtttccggaaatgtgg
aaagcaattaaatggctaagaaattgtgacaagtcaaaaatttttcatggacaagtattt
gaaccattattcactcagattgaagtacatgaccaaaataatgctaagtacatagaaaac
attattaattatcgagatatgattgcatttgtttttgagtatgcagaagatttgactaca
tttaataaaatagtaaaacaagaacgttggcaaagaataaattcaatttcagctcctcct
gccaatattcacattaacgagacaccaaattatgatataaatagtttaaggcaatttggt
ttccattcatatgcattagatatgatacaagctccaactgttataaagagatatctagct
cgaaattatgacatgcaaaatatacctattggatccaaggaagttattaataatctgcag
aatttacccaataatattgggttcttttttgcaggtaatgatcaagtccatataaaaact
tcaaactacacaggagaaaagatcacccgtcaaacacaaatatcaaatgaggcacaattt
ttgctgttttctgtagattcaaatttgataaaatcactgactatcaaaaaagaagaagct
agaataaattgtgaacattttgaacaacaacaaattgaattaaataatcagctcagaatg
gctgaagatagtcgtcagccttttattgctagaaaaaaagaaatacaaggaagttttata
aaatttcaaaataggcaacaagcttatgataaaatgatcaaagataaggagtttaaacaa
agtgaacttaaaacagaaaaagaaaggttgaccaaattattaaaccaaaattcgcaatta
atcaataagtattttgattcaatgaatggagttattgtgatgctggacagttattcaaca
agtataaaatatctgattgcttcaacctttgttgttagtaattgtcacgttgatatggaa
gaagaaaataaagttttgaagcaattgaaaaaactctatgaaactaacttgaacaatttc
aatgagtacctgaagtacatacaaaagttggattcagaatttaagaaaatgcttgatgta
gctatacattggtctagaggagtgtctccatatgataaaactttatttcaaccgttcaag
gaaaaatttgatgatatagaacagtctgaggttgaagatttagatgtattaatggtcgag
aaaaaagccaaactcaactgtctgaatattgatccaaatgctcctcaattaataaaagaa
tacaaagaacgaaaaataaaaataaaaaatttggaaaagaaattggaaagtttaaaccag
aatgctcaaaccaaagaatatgaaattgatagattacactctgaatggttaccgaaaata
caagaacttacaggtttgttgagtgaaaatttccataagtttctcaaatcatttggttgt
agtggcataattgaattggatattggcataacgaggtatgattttgaagcatatgggcta
ttgataaaggtgcaatttcgaaatgatattccttctttgaggctattagatgctaaaacc
caaagtggtggtgaacgtgcactgacaacagcattatttttgttgtccctccaagaagtc
acacattttccatttagaattgttgatgaaattaatcagggcatggataaagtctatgaa
aggaaattaatggaattgtttatggagttatttgaagacaggaaaaatcagtattttgta
gttacaccaaagttaatcaagaacctcacatttaaaaacaccacagtggatattatattt
tgtattgataaataa
DBGET
integrated database retrieval system
