Rhopalosiphum maidis (corn leaf aphid): 113556557
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Entry
113556557 CDS
T06065
Name
(RefSeq) myb-like protein I isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmd03000
]
113556557
Transcription factors [BR:
rmd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113556557
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
113556557
NCBI-ProteinID:
XP_026817386
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All DBs
Position
4:complement(52967170..53123983)
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AA seq
944 aa
AA seq
DB search
MFSNTNDHKQNLTQDYLINYLRSRLLLSSVMSSKRKSPPSKLLENATSAPDTTTTAETTV
AATAVEENGGGSSSSHSDDGYTCSNGTEVVDNCETIMETATASAVQTTDRSCGSPAVANS
PPPSSAAARPASSSGGTSPSPSSDSENSSSGGGRFASGSSPVGGSGRQSSNNNKRQRTES
PSSAAGSAAAAAAVAALRVSPFATYARQNTTGSPPQHQPSAHPPPHIASFLTLNHGAAFY
ETAVAAAAYERAFMNAGGHHVQQQQQQQQQQQQQQQQLPASYHHMMDNVQAAAVAAAAAA
GSSYFDIEQRLLRKGGVDDAEKLAHLMHLNNNTFMHNHNNNNNNNNNNNNNMMSPVGGPA
VKRTMDDVLKKLSSKKHIRDEHGVQVSGRPDSPSPKTSKPDIGTLTEHSEDPSGAPPGME
LLQHLQGDTTTIVEKERKLSEMILQLQLFREQLLTQQDHPNKFNHLKGIPSLPNPQSLFF
LPLLDQLRGLSHCSNAAALASQQQQTSTTTASTNCNVMPTAVWSNNGRPPSTSSASQCSM
QLQQEQQQTSPPGQTQQQQQLQHQTTTADPDAPLNLTKRKSPTPQPHPPSSTTPQHHLQH
LQQQHHHHQQQQQQQQQQQHHHLQQQQQQQQQQQLQHQLQQQANNMFAPRSSGGASWNSS
SSSPPATTPGTANRRSGSGQGLVSPPAAATPKLLPPPIPVTRGFMPYAGIPQPPPQHHSS
AGGKISLSPSKDKMSPYSGFQLCPPQLHRDDHSENMELSWGPNDPNFKLADDTSDRGRMI
RQQKKDGEHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGGRWKAMSNSDKQPYY
EEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMRQRRNEMRQLWYRGEGA
GPSGSGPDVAGTSFGYPPDGSISPDLMYSPANSPSFGGDSHDED
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaacaccaatgatcataaacaaaatttgacacaagattatcttattaactat
ttgcgttcaagacttttactttcaagtgtaatgtcatcgaaacgtaaatcaccgccgtcc
aagttgctggagaacgccacgagcgcaccggacacgacaacgacggctgagacgacggtt
gcagcgaccgcggtcgaagagaacggtggtggcagcagtagcagtcactcggacgacggt
tacacttgcagtaacggtaccgaagtcgtcgacaactgcgaaacgatcatggaaacggcc
actgcgtcggccgtgcagacgacggacaggagctgcggcagcccggccgtggccaatagc
ccaccgccgtcgtcagcggctgcccggccagccagcagtagcggcggcacgtcaccgtca
ccgtcatcggacagcgagaacagcagtagcggcggtggacggttcgcttccggttcgtct
cccgtaggcggcagcggccgacagtcatccaacaacaacaaacgacaacgcaccgaaagc
ccctcgtccgcggcggggtctgctgcggccgcggctgccgtggccgctctcagagtgtcg
ccgtttgccacttacgccagacaaaacactacgggatcgccgccccaacatcagccgtcg
gcacatccgccacctcacatcgcatcgtttttgacgcttaaccatggtgccgctttctac
gagacagccgttgccgcggcagcgtacgaacgagcgttcatgaacgccggcggccatcac
gttcaacagcagcagcagcagcagcagcagcagcagcaacagcaacagcaactccccgcc
tcgtatcatcacatgatggacaacgttcaggcggcggcggtggctgccgctgcggctgcc
ggttcatcttacttcgacatcgaacagcgtttacttcgcaaaggcggcgtcgacgatgcc
gaaaaactcgctcatctcatgcacctgaacaacaacactttcatgcacaaccacaacaat
aacaacaacaacaacaacaacaacaacaacaacatgatgtctccggtcggcgggccggcc
gtcaagcgaaccatggacgacgtgctcaagaaactctcgtcgaaaaaacacatcagagac
gaacacggcgtccaggtgtccggccgtcccgattcgccttcgcccaaaaccagtaaaccg
gatattggcactctgacagaacacagcgaagatccttcaggggctcccccaggcatggaa
ctactgcaacacttgcaaggtgataccactacgatagtcgaaaaagaacgcaaactgtct
gagatgatattgcagttacaattgtttcgggaacaactccttactcaacaagaccatccg
aacaagttcaaccacctgaaaggaataccaagccttccgaaccctcagtctctgttcttc
ctgccgttattggaccaactgcgcggcctgtcgcattgttccaacgcggcggcgctggcc
agtcaacagcaacagacttccactacgacggcatccaccaattgcaacgtcatgccaaca
gccgtatggtccaacaacggccgaccgccgtccacgtcgtcagccagccaatgttccatg
caactgcaacaggaacagcagcagacatcgccgccgggccagacgcagcaacaacaacag
ctgcagcatcaaacgacgactgctgacccagatgcgccgctgaatctaaccaaacgcaag
tcgcccacgccgcaaccgcatccgccatcatcaacgacaccacaacaccacctacaacat
ctccaacagcagcaccaccaccaccagcaacagcagcagcaacagcaacaacagcaacac
catcatctccagcagcagcagcagcagcagcaacaacagcaactgcaacaccaactgcaa
caacaagccaacaacatgtttgcgccaaggagttcgggtggcgccagctggaactcatcg
tcgtcttcgccaccagccaccacgccaggaacggccaacaggaggtctggttccggtcaa
ggattggtcagtccaccggccgcggccacgccaaaactccttccaccacctataccggtg
accagaggattcatgccgtacgctggcataccacaacctcctccgcagcatcactcgtcc
gccggaggcaaaataagcctatcgcccagtaaggacaagatgtcaccatactcaggattc
cagctatgcccacctcagctccacagggacgatcattccgaaaacatggaactatcttgg
ggacccaatgatccaaatttcaaacttgctgacgatactagtgacagaggtcgcatgata
cggcagcaaaagaaagatggcgagcacatcaagagaccgatgaacgcattcatggtttgg
gccaaggacgagaggcgaaagatcttgaaagcctgtcccgacatgcacaattcgaacatt
tctaaaatattaggtggcaggtggaaggcaatgtcgaactcagacaagcagccgtactat
gaggaacagtctaggctgtccaagttgcacatggaaaagcacccagactatcggtatcga
cccagaccgaaacggacgtgcatcgtggacggaaaaaagatgcggatatccgagtacaag
acgctgatgcggcagcggcgaaacgagatgcggcagctgtggtacaggggcgagggagct
ggtccttccggttccgggccggacgtcgccggcactagttttgggtatccgcccgatgga
tccatatcaccggacttgatgtactcgccggctaactcgccttcgttcggcggggacagc
cacgacgaggactag
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