Rhopalosiphum maidis (corn leaf aphid): 113556650
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Entry
113556650 CDS
T06065
Name
(RefSeq) uncharacterized protein LOC113556650
KO
K06052
jagged-1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113556650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rmd04090
]
113556650
CD molecules [BR:
rmd04090
]
Proteins
113556650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MNNL
EGF
DSL
EGF_TEN
hEGF
EGF_DL_JAG
JAG1-like_EGF2
EGF_CA
EOS1
Motif
Other DBs
NCBI-GeneID:
113556650
NCBI-ProteinID:
XP_026817535
LinkDB
All DBs
Position
3:63256725..63308094
Genome browser
AA seq
1705 aa
AA seq
DB search
MTIATATTITAASSSKWVWRPRWTELTTTSWCRPTFCHREVRDDREPVDQLPAGRPRPVR
RRAKQQSSFAPSKFALAIVTMLMMLTTVVEDVRALGFFELQILEIENYRGQLATGECCGS
DSSSSAQQQSSSAQRNTLQCTGAPQCNTLFQVCLREYQSRQQQQPSGGSSSSSLAGSRVV
IGDDDSSVMGSNHHQTPNSHLHHCSFGNVTSPVLGGNSFTLGGDAAAASSDTNSPADFNN
RGAAGGNLALQFTFSWTRSFTLVLQAMDYNNYTGLTSVIEEATYSGILLPGNEWKALSYL
GHTARMAYRVRVRCDRNYYGQNCTKLCKPRDDRFGHYTCGDTDGRKECIPGWQGDTCDIA
VCKTGCHPAHGKCESPGDCECRKGWQGELCDQCMTYPGCKHGYCNGTSWQCICDVNWGGI
LCDQDLNYCGTHEPCLNGGTCKSTAPDRYTCTCPEGFGGANCDVVLNPCATEPCANGGKC
STVDAVAASVGGAGGAGSGPVAGGAPIFGSAAQSAPLLVPKQFHCDCRPGWMGSTCNTEI
DECATQPPRCLNGGSCIDLVADWRCACADDRWRGRRCEIDVDECERQHRERQTAVIEQQC
GPNAVPCKTTGGGSNVAATTECVCRRGWTTAAAMTGSRDGHNGTLACTVNVDDCAGPDVK
CANGGTCLDLIGGYACACPVGFTGRNCRTQIDPCGGDSESGVTGSGNPCKNGGECVPLRR
WRGGGASGLTAKQQQQQQTYSCICPLGYSGENCEIDRDHCTPNPCRNGGQCLNTPDDYYC
QCSGDGWSWHGKNCTVPADAAGAGATRSTAAATTTTLMTTRTTTTTTTTAVPTTTTTTST
RPPLTPPLQRSTAITPVATIRRPGAGVPGTMTWRQQHKPYGDGDDDSTKASTVANADQQQ
NDDDGGSATAMCGGGRHRRKHWIADDGCNECKCNTKSSAVDNVDDKSAVMSCTNMWCGPA
TFDCLSGVMPCTGTNQVCVPIVDDMDDEELLDDELDKRGDAEGTTAAVDNILLWRQCLRP
PCGGVDADRDRDDVRLRYGYDDDGSQDDHSAYVAVGSWPRRRRRGQCATAVVDDGDMDDD
DDDEDGAPTTVWPSAVQHCLPNGVAGDKRLPHQQHRRRRGDACGRLRVTLDPARLRRGTR
VSAVCHSLRRLLAREWVRGGDDDGLSQEDDIEYRRNRVYVMCEAAEDQRDNNDEDRSGGA
GAGNSGNSRRRRRRRRVTIRVSVAVVSDKQRRITATGIEDDDVDVATVVGRAVQTLYKRL
NGGTVGGSTAASTKKVQSVGHRIRPALNSGVDEYDDAAALAFLTAAVVDVTLGGGTTAES
HSTPVPANSSGASNDDYRHYYYYYWTVGVACGALATVLAVAAFLLLRFRSSARRKSNGGQ
APSDSSSAVVDPSAAGGDSLMLSLVRRQNEENLKRLVTGGNRIAVTAAGGDYGGGGGCGR
NNLSAGSSLSCSRVSIVHPLCNVTTADDGSSLDLHGKQHMNGGGDADGMNVDDEKSGEKT
NVALPPVAAVRSVAVAAPRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQLRPLAVAAPQPLLLCKKTLNVDNEQRRQLQLQMQQQRQQQPPIHQQPPQQQQQHQL
PVHQQQHLQQQQVAAQQYNRRNRGDVHSQHVLPNQQQYHNQQQQQHYTASLLHSTTNNNN
GNNNNHGSEGGGNDGAASPSLTVLV
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgccactgccaccacgataaccgctgccagcagcagcaaatgggtatggcgg
ccaagatggaccgagttgacgacgacttcgtggtgtcgtccgacgttctgccatcgggag
gtccgcgacgaccgcgagcccgtcgaccaactacccgccggccgaccgaggccggttcgc
cgacgtgcaaagcaacagtcgtcgttcgcgccgtccaagttcgcgcttgcgattgtcact
atgctgatgatgttgaccaccgtggtcgaggacgtccgggcattgggattcttcgagctg
caaatattggagatcgaaaattaccgtggccaattggccacgggcgagtgttgtggcagc
gattcctcgtcgtccgcccaacagcagtcgtcttcagcacagcgcaacacactgcaatgt
accggcgcaccgcaatgcaacacactatttcaggtgtgcttgcgcgaataccagagccga
caacagcaacagccgtcgggtggatcgtcctcgtcctcgttagccggcagcagagtggtg
atcggtgacgacgattcttcggtcatgggttccaatcaccaccaaacccccaactctcat
ctgcaccactgctcctttggcaacgtcaccagtcccgtcctcggcggaaattcgtttacg
ttgggcggtgacgccgcagcggcatcgtcggataccaattcgcccgcggacttcaacaat
cgaggtgcagccggcggcaacctggcattacagtttacgttcagttggacgagatcgttt
acgttggtattgcaagcgatggactacaacaattacacgggcttgacgtccgttatcgaa
gaggccacgtattccggtatcctgttgcccggaaatgagtggaaagctttgtcgtacctg
ggccataccgctcgcatggcgtaccgggttcgcgttaggtgcgatcgcaactactacgga
caaaattgcacaaaactctgtaagccccgcgatgacaggttcggtcattatacgtgcggt
gacacggacggtcggaaagagtgtatacccggctggcagggagatacgtgcgatatagcc
gtgtgcaagaccggatgccatcccgcacacggaaagtgcgagtctcccggagattgcgag
tgccggaaaggttggcagggtgagttgtgcgatcagtgtatgacatatcctggatgcaag
cacggatattgtaacggaacttcttggcagtgcatatgcgatgtaaactggggaggcatt
ttatgcgatcaagacttgaactactgcggcactcacgaaccgtgtctgaacggagggacg
tgcaagagcacagccccggaccggtacacgtgcacgtgtcccgaagggttcgggggcgcc
aactgcgatgtggtgctgaacccgtgcgccaccgagccgtgtgccaacggcggaaaatgc
agtaccgtggacgcggtcgccgcgtccgtcggcggtgccggtggagccggatcgggtcct
gtggccggcggtgcgccgatattcggctctgctgctcaatctgcgccactgctagtgccc
aagcagttccattgcgattgtcggcccggctggatgggcagcacctgcaatacagaaatc
gacgagtgtgccactcaaccaccccggtgtctgaacggaggatcgtgcattgacctggtg
gccgactggcgttgcgcgtgtgcggacgatcgttggcgtggtcgtcgatgcgaaatagac
gtggacgaatgtgagcgacagcatagagaacggcaaactgcggtaattgagcagcagtgt
ggtccgaatgccgtgccatgcaaaacgactggtggcggaagtaacgtcgctgcgaccaca
gaatgtgtatgtcgaaggggttggacgacggcagcggcgatgacgggttctagggatggc
cacaatggtactttggcatgcactgtgaacgtggacgattgcgccggaccagacgtgaaa
tgtgccaatggcggaacttgcttggacttgatcgggggatacgcgtgtgcgtgtccggtc
ggctttactggtcgaaactgtagaactcaaatcgatccgtgtggtggagacagcgaatcc
ggtgtgaccggcagtgggaatccttgcaaaaatggtggcgaatgcgtgccattgcgacgt
tggcgtggtggaggagcgagtggattgactgccaaacagcagcagcagcagcagacttat
tcctgcatatgcccgttgggatattcaggcgaaaactgtgagattgacagggaccattgt
acgccgaacccgtgtcggaacggcggtcagtgtctgaacacgccggacgattattattgc
cagtgcagcggggacggttggtcctggcatggtaagaactgtaccgttcctgccgatgcc
gccggagccggggccaccaggtcgacggctgcggccacgacgaccacgctgatgaccaca
agaaccacaaccacaactaccacgacggccgtaccgacgacgactacgacaaccagtact
agacccccgttgacgccaccactgcagcgtagcaccgcaatcactccggtggccactatc
cgtcggccgggtgcgggcgtaccagggacgatgacgtggcgacagcagcataagccatac
ggtgacggagacgacgatagcactaaagcgtcaacagtagctaacgcggatcaacagcag
aacgacgacgacggcggcagcgccacagcgatgtgcggaggcggccgccatcggcgcaag
cattggattgccgatgacggttgcaacgagtgcaagtgcaacacaaaatcgtcagcggtt
gacaacgtcgatgacaagtcagctgtgatgtcgtgcaccaacatgtggtgtggacccgcg
actttcgactgtctgagcggcgttatgccttgcaccggcaccaaccaggtgtgcgtaccg
atcgtagacgacatggacgatgaagaattactcgatgacgaactggacaaacgaggagac
gccgaaggaacaaccgctgcggtggacaatattctcctgtggcgtcagtgtttgcgcccg
ccgtgtggtggcgtggacgccgatcgcgacagggacgacgttcggttgcggtacggttac
gacgacgacggcagtcaagacgaccacagcgcttatgtggccgtcggttcgtggccgagg
cgtcgtcgccggggccagtgtgcgaccgcggtggtggacgacggcgacatggacgacgac
gatgacgacgaagacggtgcgcccacgacggtgtggccgtcagcggttcaacattgtctg
cccaacggcgtggccggtgacaaacgtctaccgcaccagcagcaccgccgtcggcgcggt
gacgcttgcggtcggctgcgcgtcacactggacccggcgcgtctgcggcgtggcactcgg
gtgtcggctgtgtgccacagtctccgtcgactgttggccagggaatgggtgcgcggcggc
gacgacgacggcttaagccaagaggacgacatcgaatacagacgaaatcgagtgtacgtc
atgtgcgaggcggcagaggatcagcgagacaacaacgacgaagaccgaagcggtggtgct
ggtgccggaaatagcggcaactctcgccgccgacgacgacggcgccgcgttacgattcga
gtgtcggtggcggtcgtgtcggacaagcagcgacggatcacggcaaccgggatagaggac
gacgacgtcgacgttgcaaccgttgtaggacgggccgtccaaacgctttacaaacgactc
aatggcggcactgttggtggatcgacagcggcttcaacgaaaaaggtccaatcggtcggt
caccgtattcgtcctgcgttgaacagcggagtcgacgaatacgacgacgctgcggcgctg
gcgttcttgacggccgctgtagtcgacgtcacactcggcggcggcacgacggctgaatcg
cattcgacgcccgttccggcaaattcatctggtgcttcgaacgacgattaccggcattac
tactactactattggacggtcggcgtagcctgcggagcgttggccaccgtgttggcggtc
gcggcgttcctgttgctacgtttccggagcagcgccaggaggaaatcgaacggcggacaa
gcgccgtcggattcgtcgtcagctgtggtggacccttcggcggccggtggcgacagtctg
atgttgtcgctggtgcggcggcaaaacgaggaaaacctcaagcggttggtgaccggcggc
aaccggatcgccgtgacggccgccggcggtgactacggcggcggcggtggctgcggacgc
aacaacttgtcggcgggttcgtcgctgagttgttcgcgtgtcagcatcgttcacccgtta
tgcaacgtcaccacggccgacgacggatcttcgctggatttgcacggcaaacagcacatg
aatggtggcggcgacgccgacggaatgaacgttgacgacgaaaagagcggagagaaaaca
aacgtagcattgccgccggtagctgccgtcaggtctgtcgctgtagccgccccccgacaa
cagcaacaacaacagcagcagcagcagcagcagcaacagcaacaacaacagcagcagcag
cagcagcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacag
caacagcaacaactacggccgttggctgtagcagccccgcagccgttattgttatgtaaa
aagacattgaatgttgacaacgaacaacgaagacaactgcaactgcagatgcaacaacaa
cggcaacaacaaccaccgatacaccagcaaccgccacaacagcaacaacaacaccaattg
ccggtacaccaacaacaacatctgcagcaacagcaagtggcggcgcaacagtacaaccga
cgcaatcgcggagacgttcacagtcaacacgtactacctaaccaacagcagtaccacaac
caacagcagcaacaacattatacggcgtcattattgcactcgactacgaacaacaataac
ggcaacaacaacaaccacggctcggagggtggtggtaacgacggagcggcttcgccgtcg
ctgaccgttctagtgtaa
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integrated database retrieval system