Rhopalosiphum maidis (corn leaf aphid): 113556816
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Entry
113556816 CDS
T06065
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113556816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113556816
03041 Spliceosome [BR:
rmd03041
]
113556816
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113556816
Spliceosome [BR:
rmd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113556816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
113556816
NCBI-ProteinID:
XP_026817781
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All DBs
Position
1:7404164..7420947
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AA seq
661 aa
AA seq
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MSEKTSQSKPTIIRNKESEVDIYTAVAKFEEIQTSHRDENNDSTIYFNTLHKWQDIMKWN
YELKNKDDTPKEKLEEYKNNVIHLFLILKKLNRLDKIRSKQKKDLLNKKKQEIDSKHLQQ
ENLLNELFYLKKEISKCLQYKSSDSDIDLVPLDTFCLESPDSSDFIDKLKSGLINEHDLH
IRRLQWEFEQRQTQQKQCDEVEKNKETILSEIQEESRILQSILPMLKDIRTAAQPLQQSF
GLAPCQARSYADIVNVLPKPLYYLYIQTDAYRVACKSKFTVSINGDEEEARRFDSNKNNV
VDTNSDEEVDVPKPKKRHHKKSRTDTKSVQQKSLLSKHPLSVKLTLSLKNNTQFVMEFFY
LVNLNLITVTVSSSWSGFSSSYSRELLSPSSILDALFPGDNGKESPHIVNFHQLEEEKTE
FNTMEVGKPYIWAQSICGLDFLNPNTPDFLISRNNIAQVLKAINNRLKTRLSLITQLDCG
DLERRFSINGVNLTSVLSPWNTMTWENFIKLEYCKPHVEFGTVTENDLLFKRVVNYKTAT
LTVVMVIKCDYPKSNPIFTLQLNMPTINEGMSVLNSTNNNSVRELEREINVFHEQTEDED
INEMLINIIGRLVVCFEVMMETWGHSDFPKTKTILYNIRGRARNHPFKAVQHHSGIIFEH
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaaacctcgcaaagtaaaccgactatcatcagaaataaagaatccgaagtg
gatatttacacggcagtagctaaatttgaagaaatacaaacatctcatagagatgaaaat
aatgattctacgatttactttaatactttacataaatggcaagacataatgaaatggaat
tatgagttaaaaaataaagacgatacaccgaaagaaaaacttgaagaatataaaaataat
gtaatacatttatttttaattttaaaaaagttaaatagacttgataaaatacgctcaaaa
caaaaaaaagatttattgaataaaaaaaaacaagaaattgatagtaaacatctacagcaa
gaaaatcttctgaatgaattattttatttgaaaaaagaaatatccaagtgccttcaatac
aaatctagtgatagtgatattgaccttgtaccgttagatacattttgtttagagtcgcca
gattcatccgattttattgataaattaaaaagtggattgattaatgaacatgatttacat
ataagacgtctccaatgggagtttgaacagaggcaaactcaacaaaaacagtgtgatgaa
gttgaaaaaaataaagaaactatactttctgaaattcaggaagagagcaggattttacaa
agtattttacctatgcttaaagacatacgcactgctgctcaacctttacaacaaagtttt
ggtttagctccttgtcaagcaaggtcatatgcagatatcgtgaatgtattacccaaacca
ttatattatttatacatacaaacagatgcatatagggtagcttgcaaatcaaaattcact
gtttcgattaatggtgatgaagaagaagccagaagatttgattctaataagaataatgtc
gtggatactaattctgatgaggaagtagatgtgcctaaaccaaaaaaacgtcatcataag
aaatcacgaacagatacaaagtctgtacaacaaaaaagtttattatcaaaacatcctcta
tcagttaaattgacattaagtttaaagaataatactcagtttgttatggaatttttttat
ttggttaatttaaacttaataactgttaccgttagttcatcttggtctggattttcttca
tcctactctagggaattgctttcaccaagttctatacttgatgcattattcccaggcgac
aatggcaaagaaagccctcatatagtaaactttcatcaattagaagaagaaaaaactgaa
ttcaacactatggaggtaggaaagccttatatttgggctcaaagtatatgtggtttggat
tttttaaatcctaatacacctgattttttaatttcaagaaataatatagctcaagtatta
aaggcaataaacaatcgccttaaaactcgtctttcattgattactcagctcgactgtggt
gacttggaacgtaggttcagtataaacggagttaatttaacttcagttttatccccttgg
aatacaatgacatgggaaaattttattaaacttgaatattgtaaaccacatgttgaattt
ggaacagtgacagagaatgatttattatttaaacgtgtagtaaattataaaacagcaaca
ctgactgtagtaatggtaattaaatgtgattatccaaaaagtaatcctatattcacactt
caactaaatatgccaactataaatgaaggaatgtctgttttaaattctacaaataataat
tctgttagagaattggagagagaaatcaatgtttttcatgaacaaactgaagatgaagat
attaatgaaatgcttatcaacataattggtcgtcttgttgtttgttttgaggtgatgatg
gagacttgggggcattcagattttcccaaaactaaaactattttatacaacataaggggt
cgagcaagaaatcatccattcaaggctgttcaacatcattcaggaattatttttgaacac
cgttag
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