Rhopalosiphum maidis (corn leaf aphid): 113556838
Help
Entry
113556838 CDS
T06065
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmd04131
]
113556838
Membrane trafficking [BR:
rmd04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
113556838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
C1_1
PDZ_6
RGS
PDZ_2
SOS1_NGEF_PH
PH_13
zf_RING-like
PH
DUF4807
PDZ_Tricorn
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
113556838
NCBI-ProteinID:
XP_026817813
LinkDB
All DBs
Position
3:36872516..36890397
Genome browser
AA seq
1553 aa
AA seq
DB search
MDHSAAAVHTSNERPSEHIPQPLIAEALDTPSNLPSTTTLTVLVVKDERGYGMKVSGDNP
VFVQSVKQSGAAEKAGLHSGDKIIKVNGVNVTHSTHTEVVELIKSSTQVELTVQQRPLFI
NSSNPNLTLPPLPLPTMNSSVSPVTPCSSVTPTRPLHHHHSAPARDRITGPQPVDVEQMR
HVELERWQTFRLMLEKEQRYVEVLKKELHRSSSDVSNGDNYKLKRELTGAERRVKTLQDQ
LTTFNEIPLCNIVAQASSLQPPPLPPRNPPPLPPRNPTAPLISDKQSNNSHITGVNNSQT
DSPNLSLCHQRTKSNPDQLSEGKPLGSKKLSLSESFNDLHLVKHSKGGLAWDVVSPPRQH
SPNRSPDVANPCDKPHIEMNKYGGDRCSVDSSDIKLTQTPIISMEDDEISDQESSHLEEH
GPFKSFTKLVEHNAHLAVFLNYVISNSDPSALLFYLVTNLFKEGNAKEMKKWAYEIHSSF
LVPCAPLRLTNIEENLVREIDDILQKDSDREEILRKVFWKARTKAKEELNEQLSDFRHRR
TAGLGTLFGPPDFQLDDSINDKVKELKIIEMILIPNMEPFIEDMDKEIVDDRRFTMAAAL
ATVMSKIFGLRGTQFSSLLDRCPTFVSKEKSLKAKLIGKCRKFTNKGHHFVAHQYFTVTY
CNHCQLIIWGIGPQGYQCTNCILNIHRVCVKVLDENCPGPIVKKDKANDRISKLMDKIRP
ERETRRKPGLNFVQIEKSKRQSEDSGDIVGALPEKDSDRTSLSSSSFHFKADDSFKSDRG
DTSTIEEMSHCPKLKPTGISINRSESYKERIHQKRQIRERRKTSDPNLPSKYKNDVEHEM
QFSFTRSDSSSNSNLSTKSLDSRSTSLEGIGQGGEMTSCLDSDSDDELDLPDWASNVPTE
ILDQLSSKEKKRQEVINELYHTERSHIRGLKVLEHVFHRPMRELQVLPQDQLQLLFANLE
QMFELHSQFCNAMKAVRKDNQVVQNIGHVLLNTFDGTAGEVFQKAAATFCARQQIALESL
KEKRKKDTKLNIFLNEAEGNPVCKRLQLKDILPTGMIRLTKYPLLFESLVKCTSNEEELL
NIKRSFERSKIILNHVNQAVREAEDQLRLSGIQKKLDASPFEKVDHPLSVDFKNLDLTKH
RLIHEGGLWLRIGGTRQKMIELHVLLLEDLIILLNKVDDKYVLKYYGFQDRTPTLSPIIK
MSTALVRHNAVDKKAMFLVNTSLAGAQIYDLVTTSSNERKTWFRHISEATESYKAREGKV
KKQEQTSHHVIDYEDIIQGTKKKSVTESSEPPNNNNNNSLNSSQLSTSLDSNNCDTSKHG
NENFPNSETLTITNSTPVLSKTQKSPLIEPSEVLVSQSSVLKAEPVITHLEKLRRNNRVI
EEALNERLQLVADILKMPLSVSNKTDGQDKNISDEPNEILFSAVSQGNEIITVLNESLSM
TDVDAIAASLGTSNLTSNCSLYKAYATQLSRLTKVKPIVASLNSQITELLISTTKHGKLE
EDLRKELQTYRERLHAFQEKSIGSTNTENNKTESSIENTSINSSEKNGSSSEV
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atggaccattcggctgcggcggtccacacgtctaacgaaaggccatctgaacatatacct
caacccttgattgcagaggctctagatactccatcaaatttaccatctacaactacatta
actgttttagtagttaaagatgaaagaggatatggcatgaaagtttctggagataatcca
gtatttgtgcaatctgttaaacaaagtggagctgcagaaaaagcaggcttacatagtggt
gacaaaatcattaaagtgaatggtgttaatgtgacacattctacacacacagaagtggtt
gaacttataaaatcttctacccaagttgaattaacagttcaacaaaggcctttgtttata
aattcatcaaatcctaatttaacattaccacctttgcctttaccaacaatgaattcttct
gtatcgccagtaacaccgtgttcctcagtaacaccaactagacctttgcatcaccatcat
tcagctcctgcccgtgatcgaattacaggacctcagcctgttgatgtggaacaaatgagg
catgttgaactagaacgatggcaaacatttagattaatgttagaaaaagaacagaggtat
gtagaggtattaaaaaaagaacttcatagatcatcatcagatgtatccaatggtgataac
tataaattgaaaagagaattgactggtgctgagcgtcgagttaaaacattgcaagaccaa
ttaactacgttcaatgaaataccgctttgtaatattgttgcacaagcatcttcacttcaa
cctcctccactaccaccaagaaacccaccaccactacctcctagaaatccaacggcccct
ttgattagtgataagcagtcgaataattcacatatcactggtgttaacaatagtcaaact
gattctcctaacctttcattgtgtcatcaacgtacaaagtcaaatcctgatcaacttagt
gaaggtaaaccattaggtagtaaaaagttaagcttatctgaatccttcaatgatttgcat
cttgttaaacactccaagggtggattagcttgggatgtagtatcaccacctcgtcaacat
tctcctaacagatctcctgatgtagcaaacccatgtgataaaccacacatagaaatgaat
aaatatggtggtgatcgatgttcagttgattcttcagatattaaattaactcaaactcca
atcatttcaatggaggatgatgaaatttctgatcaagaatctagccatttagaagaacat
ggcccatttaaaagttttactaaattagtagaacataatgcacatctagcagtattttta
aactatgttatatcaaatagtgatccctcggctttattattctatttagttacaaattta
tttaaagagggcaatgccaaagaaatgaaaaaatgggcatatgaaatccattccagtttt
ctagtgccttgtgctccgttgagactgactaatattgaagagaatcttgttcgtgaaatt
gatgatattttacaaaaagattcggatcgtgaagaaattttacgtaaagtgttttggaaa
gctcgaacgaaagccaaagaagagttaaatgaacagttaagtgattttcgtcatagacga
acagctggtttgggtactctgtttggcccacccgattttcaacttgatgatagtattaat
gataaagttaaagaattgaaaataattgaaatgattcttatacctaatatggaaccattt
atagaggacatggacaaagagattgtagatgataggagatttacaatggcagctgcactg
gctacagttatgagtaaaatatttgggcttcggggaactcaatttagttctcttttagat
cgctgccctacatttgtttctaaagaaaaatctcttaaagctaaacttataggaaaatgt
cgaaaatttactaacaaaggacatcattttgtggctcatcagtatttcactgtgacttat
tgcaatcattgtcagttaattatttggggaattggaccacaaggttatcaatgcacaaat
tgtattttaaatattcatcgtgtttgtgtgaaagttttggatgaaaactgtcccggtcca
atagtaaaaaaagataaagctaatgatcgcattagtaaacttatggataaaattagacca
gaacgtgaaactcgaagaaaacctggtttgaactttgttcaaattgaaaaatcaaagaga
cagtctgaagattctggtgacatagttggagcccttcctgaaaaagattccgatcgaaca
agcttaagtagtagtagttttcattttaaagctgatgatagttttaaatcagacagagga
gatacaagtacaattgaagaaatgtctcactgtccaaaattaaaaccaacaggaatctcc
ataaaccgatctgaaagctataaagaacgtattcaccaaaagcgccaaattcgtgaaaga
agaaaaactagtgatcccaatctgccttcaaaatataaaaatgatgttgaacacgaaatg
cagttttcatttacacgttccgatagctcctcaaattctaatttatcaactaaaagcttg
gacagtcgtagtacatctttggaaggcattggacaaggtggagagatgacatcatgttta
gatagtgattctgatgatgaattagatttacctgattgggctagtaatgttccaactgaa
atattggatcagttatcatctaaagagaaaaaacgtcaagaagttattaacgaactttat
catactgaaagatctcatattcgagggttaaaagttttggagcatgtttttcatcgacct
atgagagaactgcaagtattaccacaagaccaacttcaactattatttgcaaaccttgaa
caaatgtttgaattacactctcagttttgtaatgccatgaaagcagtcaggaaagataat
caagttgttcaaaatattggccatgtcttacttaacacttttgatggaactgctggggaa
gtatttcaaaaagctgctgctacattttgtgctcgacaacaaatagctttagaatcttta
aaagaaaaaagaaaaaaagatacaaaattaaatatatttttaaatgaagctgagggtaat
cctgtatgcaaacgtttacaactaaaagatattttacctactggcatgattagattgact
aaatatccattattatttgaaagtttggtaaaatgtacatcaaatgaagaagaattattg
aacatcaaaagatcctttgaaagaagtaaaattattttgaaccatgtaaatcaagcggtg
cgtgaagcagaagatcaacttagattatctggaattcaaaaaaagttagatgcttctcca
tttgaaaaagttgatcatcctctcagtgttgactttaagaatttagatttaacaaaacat
agattaattcatgaaggtggtctgtggttaagaattggtggaactcgtcaaaagatgatt
gaattacatgtgttattgttagaagatttaattattttgttgaacaaggtagatgataaa
tatgttttaaaatattatggctttcaagatcgtactcctactttaagtccaattattaaa
atgtcaacagctttagtcagacataatgcagtggacaaaaaagctatgttcttagtaaac
acatcactagctggtgctcagatatatgatttagtaacaacttcatcgaatgaacgaaaa
acatggtttcgacatatctctgaagcaactgaatcctataaagctcgtgaaggaaaagta
aaaaaacaagaacagacctctcatcatgttattgattacgaagacataatacagggtact
aaaaaaaagtcggtgactgaaagttcggaacctcctaataataacaataataatagttta
aatagttcccagttatccacttcattagactctaataattgtgatacatctaaacatggt
aatgaaaactttccaaatagtgaaacattgacaatcactaacagcactcctgtgctatcc
aaaactcaaaaaagtccactaattgagccatctgaagtcttggtgtcacaaagttctgta
ctcaaagctgaaccagttattacacaccttgaaaaattacgaagaaataatagagtaatt
gaagaagcattaaatgaacgtttacaattagttgctgatatattaaaaatgcctttatca
gtctctaataaaactgatggtcaagataaaaacatttcagacgagccaaatgaaatttta
ttttcagcagtgtctcaagggaatgaaatcatcacagtattaaatgaatcgctaagtatg
actgatgtcgatgctattgctgctagcttgggaacatcaaatttaacttcgaattgtagt
ttatataaagcttatgctacacaattgtctcggctcactaaagttaaaccaattgtagct
tctttaaattctcaaattacagaacttttgatatcaactactaaacatggtaaactggaa
gaagacttacgtaaagaacttcagacatatcgggaaagactacatgcttttcaagaaaaa
tcaataggatctactaatactgaaaataataaaactgaaagttctatcgaaaacacttct
atcaacagttcagaaaaaaatggctcatcatcagaggtatga
DBGET
integrated database retrieval system
