KEGG   Rhopalosiphum maidis (corn leaf aphid): 113556871
Entry
113556871         CDS       T06065                                 
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113556871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rmd03041]
    113556871
Spliceosome [BR:rmd03041]
 Complex C
  Other components
   Step II factors
    113556871
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_SPT8 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_LRRK2 Beta-prop_Vps41 WD_LRWD1 NBCH_WD40 PQQ_2 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 113556871
NCBI-ProteinID: XP_026817875
LinkDB
Position
4:54746746..54751015
AA seq 562 aa
MLNLKDYGSSSDEEDPSINTSQETPFNNSISVVELNEKFAVNAAPNVLPPGPDTSVQYLD
VGTKEITRNMKYEELFTPVAGPENPFLTQQQKAPKNMMTGFVEKAHINDFMFETQRRTFH
SYGYALDPTVDSNEIIGRKPDDSDEFKTVFESVPKRPADKRKRHKNDNPEDIDGYLGPWG
CYVDEEKISKPEGEDAIAIEEFLAKKHKRGKKVEDKSFKEKSILHIKDPVDYQGRSFLHI
PQDVGVNLKSNAPPDRCFLPKAHIHTWQGHTKGISAIRWFPRSAHLLMSCSMDCRVKLWD
VYRDRKCIRTYIGHTQAVRDTCFNNKGTKFLSAAYDRYVKLWDTETGDCIKSFTNHKVLY
CVKFNPEEEKQHLFVAGTADKKIVCWDTRSGNIVQEYERHLGAVNSITFVDENRRFVTTS
DDKSLRVWEWDIPVDMKYIADPTMHSMPSVTIAPNKKWLACQSMDNKIVIFSAMNRFKVN
RKKSFSGHMVAGYACSLDFSPDMSYLVSGDADGKVFIWDWKTSRLYTKWKAHDNVCIAAL
WHPHEPSKVATAGWDGLIKYWD
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgttgaatctaaaagattatggtagcagtagtgatgaagaagatccatcaataaataca
tctcaagaaaccccttttaataattcaataagtgttgttgaattgaatgaaaagtttgca
gtaaatgcagctcccaatgttttgccaccaggaccagatacatcagttcagtatcttgat
gttggaacaaaagaaatcactcggaatatgaaatatgaagagcttttcacaccagttgca
ggaccagaaaatccttttttaacacaacaacaaaaagcccctaaaaacatgatgactgga
tttgttgaaaaagcacatattaatgattttatgtttgaaactcaaagaagaacatttcat
agttatggttatgctctggatcctacagttgattctaatgaaattattggtcgtaagcct
gatgattctgatgaatttaaaacagtttttgaatctgtgccgaaaaggccagctgataaa
agaaaacgtcataaaaatgacaatccagaagatattgatggctatctaggaccttgggga
tgttatgttgatgaagagaaaatatcaaaaccagaaggagaagatgcaattgctattgaa
gaattccttgcaaaaaaacataaacgtggcaaaaaagttgaagataaaagctttaaagaa
aaatcaattctgcatattaaagatcctgttgattatcaaggacgttcatttttacatatt
ccacaagatgtaggtgttaatcttaaatcaaatgcacctcctgatagatgtttccttcct
aaagcacatatacatacatggcagggtcatactaaaggtatatcagctattagatggttc
ccgaggtctgctcatttacttatgtcttgcagcatggattgtagagtcaagttgtgggat
gtttatagagatagaaaatgtattcgaacttatataggccatacacaagcagttagagat
acatgtttcaacaataaagggacaaaatttttatcagcagcgtatgatcggtatgttaaa
ctatgggacacggaaactggagattgcataaaaagttttacaaatcataaagtattatat
tgtgtaaaattcaacccagaagaagaaaaacaacatttatttgttgctggtacagctgat
aaaaaaattgtttgttgggacactagatcaggaaatattgttcaagaatatgaaagacat
ttaggagcagttaacagtatcacttttgttgatgaaaatagacgatttgtcacaacatct
gatgataaaagtttacgcgtttgggaatgggacataccagtagatatgaagtatatagcc
gatccaactatgcattcaatgccaagtgtaacaattgcgccaaataaaaagtggctagct
tgtcagagtatggacaataaaatagttatattctcagcaatgaatcgttttaaagtgaat
agaaaaaagagtttttctggtcatatggtggctggatatgcctgttcattagatttttca
cctgatatgagttacctagtctcaggagatgctgatggaaaagtatttatttgggattgg
aaaacaagtcgtttgtatacaaaatggaaagcacacgataatgtttgtattgctgcatta
tggcatccacacgaacctagcaaagtagcaactgctggatgggatggacttatcaaatat
tgggattaa

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