Rhopalosiphum maidis (corn leaf aphid): 113556943
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Entry
113556943 CDS
T06065
Name
(RefSeq) PMS1 protein homolog 1-like
KO
K10864
DNA mismatch repair protein PMS1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmd03400
]
113556943
DNA repair and recombination proteins [BR:
rmd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113556943
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Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
JMY
Motif
Other DBs
NCBI-GeneID:
113556943
NCBI-ProteinID:
XP_026817988
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Position
1:complement(77949506..77955468)
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AA seq
954 aa
AA seq
DB search
MSMKQLPSDTIKLISSTQVITSASSVVKELMENSIDANSTIIDIRLDNYGLDKIEIRDNG
VGISHSDVYVMCLRSYTSKICDISDLNKLTFYGFRGEALSSICAVADVTIITKSDFDEYA
KSFTMDSNGRVKNSSICHHQKGTVIKIENLFKKLPVRKQIYSSKKHCVNDLRRVENIVKS
LAAIQQNIRVSLVHNKSVLWQMTSATDLVVTFGQIWSSSMTKCVKHLTLLNEEVNIDIVL
PVQNINVQNCFFTTNVADAIYLYVNKRPIRDNKIEKLIVGEFNNYFGHYLPPGKYLPCFI
SITVPPETIDINLEPDKSRILFHNQDMILHNLKNCITKYYYNDKVENDESSINKTLEPPN
NKRKIPYDSEEVNVKKSPILISQVIDSFVPNAESTKIINNNSLDSVLSNDEHTQIVKELS
LEEIDFEEPFLSKNNTSDKMLCLKNNKVESSDDISEYRKKLLNVGNSSSLQTIQSDNANV
RNFIAEDISISQWSKGDVVLNGKPLESGAVLKSDIIIETLEKNSMPRINKEIEILHSPAV
SQEDENIVVKNYNPVHMNDETSENISSSSSTKQLKIEHLFRTVSIPDEQVPGLNHLVNRP
QSWVPQPRSKRPMRDVPEEDLSDTIRSVSSQMGNKEMSGFTFFARETRIKIIQENPGIEF
TKVSKELARLWGSLSEDEKLRYKKLSNEQKKGIITTKTNDVQLPKKSFQTIAKNLERHST
QINVELFEIKRNIFKNHKMMLSKFMLIGQIEDNNWFCFVHNEIQAINICRLQEAVIFFQK
MADDEIPLKMLDQSITTSKKYLGEKNYRFLMDLDTSYEPSADKYTITDKRIVKNGFNIVI
VFNEDSDNPDINITDVALHISTYGAEELKQLLELMQLEKENDNLYCCRPLKVVNYLRSET
VRYCIKTGLPKTKEEINSLLEYWFKNEKLFSHNTCVHYKKVFTSIHCIDEKSKS
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaaacaattaccttcggatacgattaaactgataagtagtactcaagtcatt
acgtcagcgtcgtcggtggtgaaggaattaatggaaaactctattgacgccaattctaca
atcattgatatacgtttggataactatggactagacaaaattgaaatacgcgacaatggg
gttggaatttcacacagtgacgtgtatgtcatgtgtttgcgtagttacacttccaaaata
tgtgatatatccgatttgaataaattgactttctacggatttcgaggtgaagctcttagt
tccatttgtgctgtagctgatgtgactatcattacaaaatcagattttgatgaatatgcc
aaatcatttacaatggatagtaatggtcgtgtgaagaatagttcaatttgtcatcaccaa
aagggtacagttatcaagatagaaaaccttttcaaaaagttaccagttcgaaaacagatt
tatagttcaaaaaaacactgtgttaatgatttacgtagagtagaaaacattgttaaatca
ttagcagctattcaacaaaacattcgtgtttccttagttcataataaatctgtactatgg
caaatgacttcagctactgatttggttgtgacatttggtcaaatttggtcatcgtcgatg
actaaatgtgtgaagcacttaacacttttaaatgaagaagtaaatattgatatagtttta
cctgtacaaaatataaatgtgcaaaattgtttttttaccacaaatgttgctgatgcgatt
tatttatatgtcaacaaaagaccaatcagggataacaaaattgaaaaacttattgttgga
gaattcaataattattttggacattatttacctccaggcaaatacttgccgtgttttata
tctataaccgtcccacctgaaactatagacataaatttggaaccagataaatctcgaata
ttatttcataatcaggatatgatattacacaatcttaagaactgtattactaaatattat
tataatgataaagtagaaaatgatgaatctagtattaataaaaccctagaacctccaaat
aataaaagaaaaataccttatgattcagaagaagtcaatgtaaaaaaatctccaatttta
atttcacaagttattgattcttttgtcccaaatgcagagtcgactaaaattattaataat
aattcattagactccgtattaagcaatgacgagcatacacaaattgttaaggaattaagc
ttagaagaaattgattttgaagaaccatttttatcaaaaaataatacaagtgacaaaatg
ttatgtttgaaaaataacaaagtggaaagtagcgatgatatttcagaataccgtaaaaag
ttattgaatgtaggaaatagttcttctcttcaaactattcaatctgataacgcaaatgta
agaaattttatagctgaagatatatcaatttctcaatggagtaagggtgatgtagttctg
aatggaaaaccattagagagtggagcagtgttaaaatctgatattataattgaaacctta
gaaaaaaacagtatgccaagaataaataaagaaattgaaattcttcattctccagctgta
tctcaagaggatgaaaatattgtagtgaaaaattataatccagtacacatgaatgatgaa
acctcagaaaatatttcatcaagtagcagtacaaagcagttaaaaattgaacatcttttt
cgtacagtttctatacctgatgagcaagttcctggtcttaatcatttagtaaatcgccca
cagtcttgggtacctcaacctagatcaaaaagaccaatgagagatgttccagaagaagat
cttagtgacaccattcgtagtgtcagcagtcaaatgggaaacaaagaaatgtcaggattt
acattttttgccagggaaacaagaataaaaattattcaagaaaatccagggatagaattt
acaaaagtaagcaaagaacttgcaagattatggggaagtttgagtgaagatgaaaaatta
aggtataaaaaattgtcaaatgaacagaaaaaaggaataataaccactaaaacaaatgat
gtacaattaccaaaaaaatcatttcaaactattgctaaaaatcttgaaaggcattctact
caaattaatgtagaattatttgagatcaaaagaaatatttttaagaatcataaaatgatg
ttatccaaatttatgcttattggtcaaatagaggacaataattggttttgttttgtgcat
aatgaaatacaagctataaatatttgtcgtcttcaagaagctgtaatttttttccagaaa
atggctgatgatgagataccacttaaaatgttggaccaatcaattacaacaagtaaaaaa
tatttgggtgaaaaaaactatcgttttcttatggatctggatacttcatatgaaccatca
gctgataaatatactattacagataaaagaatagtgaagaatggttttaatattgttatt
gtatttaatgaagattctgataatccggatataaacatcacagatgtagctctacatata
tcaacatatggtgctgaggaactcaaacaacttttagaattgatgcaattggaaaaagaa
aacgataacctatattgttgccgtccgttgaaagttgtcaactatctgcggagtgaaaca
gtaagatactgcataaaaactgggctccctaaaacaaaagaagaaattaatagcctattg
gagtattggtttaaaaatgaaaagctattttcacataatacttgcgtccattataaaaaa
gtttttacatcaatacattgtattgatgagaaatctaaatcataa
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