Rhopalosiphum maidis (corn leaf aphid): 113556959
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Entry
113556959 CDS
T06065
Name
(RefSeq) uncharacterized protein LOC113556959
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113556959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmd03036
]
113556959
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
113556959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
113556959
NCBI-ProteinID:
XP_026818007
LinkDB
All DBs
Position
4:47918030..47929162
Genome browser
AA seq
1783 aa
AA seq
DB search
MSSYNDYQHWPQESTSNSDEDELSSPEIEQDDSDDDTESSTSSTSTSGTSSSGSSQSGSD
SESTSTADEDETISLKTETVIANKTELSLPAGMCEDEEVFKQLFSVNSWVCLSDLQKQHL
KNFLPTFSENDLMEKEITLRMLFGGKSFRFGVNPIDDFHDKLKNGHFRPDIVKMKSLLRR
SLKREYRKSQRIYNYNMLKKLISGRKKVIDDLNSSTTSMTNNDGINNFDMHQQVKRRYFQ
EVSDIKQLVGDASEDSSDSNYQERPPTRLAKKQRRNLSIIQDSLEPELEIITSTLSSFPD
RLDLCKVALPLSNPFEPSDEMYKEMLISHKRKKKKIEQEHKRMKYEQIKEHIKPVVSLST
TEKKKLANSDRPRLKRTKPVKHQNQSIPTPLQLDIQPPLQLDVQSPVQIPVPLDAKLPVQ
LDVQSSVQLNAQPQVQLDVQPQVQLDVQPQVQLDVQSHKQIDAQSQVQLDDQPRVQLDIQ
PTMQLDVRPNMQLDESHNILSKQEERTQSEKCSTSYTKEETLQNVISPPLLSPSSPSISL
SNMAEEESIKTNLNAIKLDPCTPILTDFLKMEEEITLNDSIKLEPISLTAEEIRKAEEGQ
AAAAMLLEQMSDVEEKYNPPLIPSPPLPSPPPSPSPSPPLSSPPPSSSRLSPPPLPENIS
DSKFSPPNYIQREFHPEDMLTSTVQTINTESPPRIIHPCLHSLTPSDYGSKQLSLSPVST
PSKVITDSNYVGSLSELEGFHVLDIKTMCNEDLDLKTPQMRKMVSSFFALIRDIICANWD
YRMDMTALNERVNDWVISTFNNRTNPDWYHSLTLKTWPKSLQSAIGFLAGHFPEWQPEDF
VPYIEYKPSLDIYQWIGAGRDSDTRLGDLCKCWLHNLNNISSKLKSINDDVIGIKNVPIP
STTDIISTIEMSETDSTIPIPLPLLDTWIVTPSSDEERAIFQAQEKQRFLKPHRSFIYQM
HGYESVVGPVRGIYNSSNIHKAARGHSLLIENRPHFISILVLVRDATARLPNGMGTRSDI
CTLLKDSQYLMEANLTELHNAVSGALDRLHYEHDPCVKYDPKRKIWIYLHRGRKLEEFER
LHLEQQGAVKMKCWRRNKAQKKPLEPKRTPNRKLTSNVLLESLSMLDLPTSSTSDSFPSS
STSPVLPDMRVTQEMTGIDHSKQSIKTPRVTKNRKVPIQTMQMTDNAVELNIDCPTLIDQ
NSTVSSQIFSMPVSNHNSTVTATNSSIISSNNIPNQSFSGNITSHSIISSNSQSIANSFT
CQSIASNISSQSIAGNILSQSKAVNSLKVVSSQAVSNNGQMINISQTMNSNNQTFINNNK
MVVNNISSNKQVLSSGDLLAIGSRKKTKHVQIAQPVSIGQSSGLTNYQHDHHLNITKSPQ
IKEQQRQILVLKQKRSDHSISSSEQNTTVVNQTDTIKPQTVQHFIQLQNQQKLQKQQQNM
QLKLLQHKQIQQQTLQQNKQQVIIRKTDGDDKTEAVDTEQPQVIFLKQGPRNVQQQEAQQ
ITQQQLQQLLMLRPQQQAGQQAQVVMVKQQGNDQKSIALKPILTSLRGTKIQQTPAKTAN
LLVQARQATPNVQRKMTKPLVGKFVSNQRAQLPVDSVLANRKLSGIPGTPLRISGVQTSK
SGQPHYTVVTVAQPKLMPSNQPNIGQKTPTRISTINDRLKSGDTNQPQTVRVVQSQIGGK
PLLVTNKAQISSAITGISTSSPVVSSTANTYTVVQQGSQQILVPASSLKSFQGLKVIPIS
QHNLKGRSQMFARILNSDSVRPVFIHQQSNQDTCSQGPNESNT
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagttataatgactatcaacattggcctcaagagtccacatcaaattcagatgaa
gatgaattgtcatctcctgaaattgagcaggacgatagtgatgatgatactgagtcatct
acatctagtactagtacttctggtacaagtagtagtggtagcagtcagtcaggttcagat
tctgaaagtactagcactgccgatgaagatgaaactatatcgctgaaaactgaaactgtg
atagccaataaaactgagcttagtttaccagctggaatgtgtgaagatgaagaagttttc
aaacaattattttctgttaactcttgggtgtgccttagtgatctacaaaagcaacattta
aagaattttcttcctacattttctgaaaatgatctaatggaaaaagaaattactttaaga
atgctttttggtggaaaaagttttcggttcggtgttaatccaatcgatgattttcatgat
aaattaaaaaacggacattttcgacctgatattgtcaaaatgaaatcacttttacgacga
tcgctcaagagagagtatagaaaaagtcaacgtatatataattacaatatgttaaaaaaa
ttaatttctgggcgtaaaaaggttattgatgatttaaatagttctactacatctatgaca
aacaatgatggtattaataattttgatatgcatcagcaagttaaaagaagatatttccaa
gaagtttctgatattaagcaattagttggggatgcctctgaagatagttcagatagcaat
tatcaagaacgaccacctactcgtttggctaaaaaacagcgacgtaatttaagtattata
caagattcacttgaacctgagttagaaattattacttctaccttgtcaagttttcctgat
agactagatttgtgtaaagttgctttgccattaagtaatccatttgagccctctgatgaa
atgtataaagaaatgttaatatctcataaaagaaaaaaaaagaaaattgaacaggaacat
aaacgtatgaaatatgaacaaatcaaagaacatattaaaccagtagtatcattaagcacg
acagagaaaaagaaattagcaaatagtgatcgacctcggttgaagcgtacaaaacctgtc
aaacatcaaaaccagtcaattccaacaccacttcaattagatatacaacctcctttgcag
ttagatgtacaatcacctgtacaaattcctgtgccactagatgcaaaacttcctgtccaa
ttagatgtacaatcttctgtgcagttaaatgcacaacctcaagtacagttagatgtacaa
cctcaagtacagttagatgtacaacctcaagtgcagttagatgtacaatctcataaacag
atagatgcacaatctcaagtgcagctagatgatcaacctcgtgtgcagttagatatacaa
cctactatgcagttagatgtgcgacctaatatgcagttagatgaatcacacaatatttta
tcaaaacaagaagaaaggactcaatcagaaaagtgtagtacttcatatactaaagaagag
acactccaaaatgtaatttcacctccacttctttcaccatcatcaccatcgatttcatta
tcaaatatggctgaagaagaatcaatcaagactaatttgaatgccattaaattagatcct
tgtactcctattctaacagattttttaaaaatggaagaagaaataactttaaatgattct
attaaactagaacctattagtctaacagctgaagaaatacgtaaagcagaagaaggtcaa
gctgctgcagctatgttattagaacaaatgagtgatgtcgaagaaaagtacaatccacca
ttaataccttcaccaccacttccgtcacctccaccatcgccatctccatcaccaccttta
tcatcaccaccaccttcatcatcgagactatcaccaccaccactacctgaaaatatttca
gattctaagttcagtccacctaactatattcagagagagtttcatccagaagacatgtta
actagtacagtgcaaaccataaatacagaatctccacctaggataatacatccttgttta
cactctctaactcctagtgattatggttctaaacagctatcattatcaccagtgtctact
cctagtaaagtcataacagattctaattatgttggatcattatcagagttagagggtttt
catgttttagatattaaaactatgtgcaatgaggatttagatctgaaaactcctcaaatg
agaaaaatggtttctagtttctttgcacttataagggatataatctgtgccaactgggat
taccgtatggatatgactgcattgaatgaacgagttaatgattgggtgatttcaacattt
aataacagaacaaatccagattggtaccacagcttaacattaaaaacttggccaaaatca
ctacagtcagctataggtttcttagctggacatttccctgaatggcagcctgaagatttt
gttccttacattgaatataagcctagtttagatatttatcaatggattggtgctggtaga
gattcagacactcgacttggagatttatgcaagtgctggttacataacttgaataatatt
agctcaaaattaaaaagtattaatgatgatgtgattggtattaaaaatgtaccaattcca
tctacaacagatattatttcaacaattgaaatgtctgaaactgattctacaattcctata
cctttaccgttattagacacatggatagtgactccttctagtgatgaagaacgtgcaatt
tttcaggctcaagaaaagcaacgatttttaaaaccacatcgttcatttatttatcaaatg
catggttatgagtcggttgtgggtcctgtgcgcggtatttataattcatctaatattcac
aaagcagctcgtggtcattccttattgattgaaaatagacctcatttcatatcaatatta
gtattagtacgtgatgcaacagctagattaccaaatggaatgggcactcgtagtgacatt
tgtaccttacttaaagattctcaatacttgatggaagcaaatctaactgaattacataat
gctgttagtggagctttggatagattgcattatgaacatgatccatgtgttaaatatgat
ccaaaacgtaaaatatggatttatttacacagaggacgaaaattggaagaatttgaacgt
ttgcatttggaacaacaaggggcagtcaaaatgaaatgctggcgaagaaataaagcacaa
aaaaaaccattagaaccaaaacgtacaccaaatagaaaattaacatcaaacgttctttta
gaatctttatcaatgttagatttacctacaagttcaacttcagactcttttccaagttca
agcacatcacctgtattgcctgatatgcgtgtcactcaagaaatgactgggatagaccat
tcaaaacaatcaataaaaacacctagggttactaagaatcgaaaagtaccaatacaaacc
atgcaaatgacagataacgcagttgagctaaacatagattgtccaacattaattgatcaa
aatagtacagtttcttcccaaatattttccatgcctgtttcaaaccataattcaacagtt
acagctactaatagctcaattatttcttctaataatattcctaatcaatcattttctggc
aacattactagccattcaattataagtagtaatagtcaatcaattgctaatagttttacc
tgtcaatcaattgccagtaatataagtagtcaatcaattgctggtaacattttaagtcag
tcaaaggctgttaacagcttaaaagtagttagcagtcaagctgtatccaataatggacag
atgatcaacatttcccaaactatgaacagcaataatcaaacatttatcaataacaataaa
atggttgtaaacaatatatcttcaaataaacaagtgttatcatctggagatctgttagca
attggttctagaaagaaaacaaaacatgtacaaattgctcaaccagtttctatcggacaa
tcttctggacttacaaattatcaacatgatcatcatcttaatattaccaaatcacctcaa
attaaagaacaacaacgccagatattagttttaaaacaaaagcgatctgatcattcaatt
tctagttctgaacaaaatacaactgttgttaaccaaactgatactataaaaccacaaact
gttcaacattttattcaactacagaatcaacaaaagttgcagaaacaacaacaaaatatg
caactgaaactcttgcaacataaacagattcaacagcaaactttgcaacaaaataaacag
caagtcattatcagaaagactgatggggatgataaaacagaagcagtagacaccgaacag
cctcaagttatattcttaaaacagggtccaaggaatgtccaacagcaggaggcacaacaa
attacacaacaacaattacaacagttattgatgttaaggccacagcaacaggcaggacaa
caggctcaggttgtcatggttaaacaacaaggaaatgatcagaaatctattgcacttaag
ccaatattgacatcactccgtggtacaaaaattcaacaaactccagcgaaaactgctaat
ttgttagtacaagcaagacaagccactccaaatgtacagcgaaaaatgactaaacctctt
gttggcaagtttgtgtctaatcaaagagcacaattacctgttgattcagttcttgctaat
agaaaattatctggtattccaggcactccattacgaatttctggagtacaaacttctaaa
agtggtcaaccacactatacagtggtgactgttgctcaaccaaaacttatgccatcaaat
caaccaaatattggacagaaaacacctacacgaatatcaactattaatgatcgtttaaaa
tctggtgataccaatcaaccacaaactgtacgtgtggttcaatcacaaattggtggaaaa
cctttattagttactaataaagcacagatttcatcagctattacgggtatatcaacatca
tcaccagtagttagttctactgccaacacttatactgtggtgcaacaaggttctcaacaa
atacttgtacctgcaagttctttaaagtcttttcaagggttaaaagttataccaatatca
caacacaatcttaaaggacgatcacaaatgtttgctcgaatattaaattctgatagcgtg
agacctgtgtttattcatcaacagtccaatcaagacacttgtagccaaggaccaaatgaa
tcaaatacttaa
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integrated database retrieval system
