KEGG T06065: 113557167

Rhopalosiphum maidis (corn leaf aphid): 113557167

Entry

113557167         CDS       T06065

Name

(RefSeq) DNA-directed RNA polymerase II subunit Rpb4

K03012

DNA-directed RNA polymerase II subunit RPB4

Organism

rmd Rhopalosiphum maidis (corn leaf aphid)

Pathway

rmd03020

RNA polymerase

rmd03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:rmd00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113557167
  09124 Replication and repair
   03420 Nucleotide excision repair
    113557167
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rmd03021]
    113557167
   03400 DNA repair and recombination proteins [BR:rmd03400]
    113557167
Transcription machinery [BR:rmd03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     113557167
DNA repair and recombination proteins [BR:rmd03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113557167

SSDB

Motif

Pfam:

RNA_pol_Rpb4 Tfb4

Other DBs

NCBI-GeneID:

113557167

NCBI-ProteinID:

XP_026818312

LinkDB

Position

1:complement(81561974..81562729)

AA seq 138 aa
MAQHMNTAVDEDAALLQFPKEFENAETLLISEVNMLLKFRKNQNESAEEEQEFSEVFNKT
LTYTEQCSKFKNKETIVAVRNLLAGKKLHKFELASIGNLCPQLADEAKSLIPSLEGRFDD
DELQQILDDIQAKLSIQY

NT seq 417 nt +upstreamnt +downstreamnt
atggcgcaacatatgaacactgctgtggacgaagacgccgcgctgttgcaatttcctaaa
gaatttgaaaacgctgaaaccttacttatttccgaagtaaatatgttgttgaaatttcgt
aagaaccaaaatgaaagtgctgaagaagaacaagaattttcggaagtgtttaacaaaaca
ttgacatatacagaacaatgttccaagttcaaaaacaaagaaaccattgttgctgtaagg
aatttacttgccgggaaaaaattgcacaaatttgaactggcatcaattggtaacttatgt
cctcaactcgccgatgaagccaaatcacttatacccagtttagaaggcagatttgacgat
gatgaattacaacaaattctagatgatatacaagctaaattaagtattcagtactaa

DBGET integrated database retrieval system