Rhopalosiphum maidis (corn leaf aphid): 113557340
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Entry
113557340 CDS
T06065
Name
(RefSeq) brahma-associated protein of 60 kDa
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113557340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmd03021
]
113557340
03036 Chromosome and associated proteins [BR:
rmd03036
]
113557340
Transcription machinery [BR:
rmd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113557340
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113557340
PBAF complex
113557340
GBAF(ncBAF) complex
113557340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
113557340
NCBI-ProteinID:
XP_026818604
LinkDB
All DBs
Position
1:complement(81740005..81743650)
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AA seq
499 aa
AA seq
DB search
MSNFPPTPTNPNVQNRFGQYPNQTYPMQQRPGMYQQGGPIPQGVPPNAMMGARGPPTQGF
SPMRHGAVPMVPNQPTPGKRPADNRNPPPMVKGDFPHNIQVQNSSIGMSKKKKKLADKIL
PQKVRDLVPESQAYMDLLAFERKLDSTIMRKRLDIQEALKRPMKQKRKLRIFISNTFYPA
KEPGENEEGSVASWELRVEGRLLEDSKNEPNKIKRKFSSFFKSLVIELDKDLYGPDNHLV
EWHRTATTQETDGFQVKRPGDKNVRCTILLLLDYQPLQFKLDQRLARLLGVHTQTRPVII
SALWQFIKTHKLQDSHEKEYINCDKYLEQIFNCTRMKFAEVPQRLNTLLHPPDPIVINHI
ISVEGVEQKQTACYDIDVEVDDTLKAQMNNFLLSTASQQEIQSLDNKIHETVETINQLKT
NREFFLSFAKDPQQFIYKWIISQTRDLKTMTDVVGNPEEERRAEFYYQPWTQEAVNRYFY
SKVQQKRAELEHQLGIRNS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattttccacctacccctaccaacccaaatgttcaaaatagatttggtcaatac
ccaaatcaaacgtatccgatgcaacaaaggcccggcatgtaccaacaaggtggtccgata
cctcaaggtgtaccacccaatgccatgatgggagctcgtggaccccccactcaaggattt
agccctatgagacatggcgctgtcccaatggtaccgaaccagccaacgcctggcaaaaga
cctgctgataatcgaaatccacctcccatggtcaagggtgattttcctcacaacatacaa
gttcaaaatagcagtattggaatgagcaaaaaaaagaaaaaattggcagataaaatatta
ccccaaaaagtaagggatcttgttccagaatcacaagcatatatggatctattggcattt
gaaagaaaactcgattcaacaatcatgagaaaaagattagacatacaagaagcattaaag
cgcccaatgaaacaaaaacgtaaattgcgtatatttatatcaaatacattttatcctgcg
aaagagcctggagaaaatgaagaaggaagtgtcgcttcttgggaattaagagttgaaggg
cgtttattagaagattctaaaaatgagccaaataagataaaaagaaaattttcttctttc
tttaaatcattggtcattgaacttgataaagatttatatgggcctgataatcatctagtt
gaatggcatcgaactgcaacaactcaagaaactgatggatttcaagtgaaacgaccggga
gataaaaatgtacgctgtactattttattgctgcttgattatcaaccattgcaatttaaa
ttggaccaacgtttagctcgacttttgggtgttcatactcaaaccagaccagtcattata
agtgctctctggcagtttataaaaactcataagctacaagattcacatgaaaaagaatat
atcaactgtgataagtatttggaacaaatatttaattgtacccgtatgaaatttgctgaa
gtcccacagagacttaatactttacttcatcctcctgatcctattgtaattaatcatatt
ataagtgttgaaggtgttgaacaaaaacaaactgcatgctatgatattgatgttgaagtg
gatgatactttaaaagcacaaatgaataatttcttattatccactgctagccagcaagaa
atacagagtctagataacaagatccatgaaacagttgaaacaatcaatcagttaaagaca
aatagagaattctttttgagttttgctaaagatcctcaacaatttatatataaatggata
atctcacaaacaagagacttaaagacgatgacggatgtagttggaaatccagaagaagaa
cgaagagcagaattttactatcaaccgtggacacaagaagctgttaatcgttatttctat
tccaaagttcaacagaaacgggcagaacttgaacatcagttgggtattcgtaactcataa
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