Rhopalosiphum maidis (corn leaf aphid): 113557672
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Entry
113557672 CDS
T06065
Name
(RefSeq) nucleoporin Ndc1
KO
K14315
nucleoporin NDC1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113557672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113557672
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113557672
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
113557672
NCBI-ProteinID:
XP_026819037
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All DBs
Position
1:complement(39277693..39279546)
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AA seq
474 aa
AA seq
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MTSTSNIFLTRTLKSTFSSLLFTYVTAFVLSLRSILSFTFRLYSLFYVPAVLVAVVLFII
TGSRRYVRTDLPCTNRFSKIVKGLSIQTLLLASMFSLSAWFLSSLNPFCHNEKIWHLLNI
GCALAGILFHYENVYFEQDFHFPIINTTKYSMFMSKLSEIIFKSLKKSFLYIFFIFIPLY
VIEPKLCTDFYFFGNLWFSISLVLYLFYSFEHIIFLTMTERIIFPIVTIKQNDNCLLNAL
NVDNKIIKSLALYDLYQATIKDAERRKEIFSLSFAGNVPQSWKIIFNYCINNIKSTTEDL
KNVVNHIPLKLINRRNITNARLIHINDKVNSKSSEENSNQQGKLLCFVEKFWLYKYFFGP
LDKDKLLEELETTVWCCYILSNLAVVSLKEDEYGIVREQLGQIVSTILDLKNQLDVQQKS
FNNQKTKKIEYLKTHVKTCAVMLALNFGMYANDIGLDETQLHSFKKIIVLLNNC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccacttcaaacatttttttaacaaggactttgaaatctacattcagttcttta
ttattcacgtatgtaacagcgttcgtattatcacttcggtcaattctcagcttcacattc
agattgtattcgttattttacgtgccggcagttttggtagctgttgtattatttattata
accggttcgcgaagatatgtaagaacagatctaccttgtacaaatcgttttagcaaaatt
gtcaaaggattgtcaattcaaaccctattactcgcgtctatgttttcgttgagtgcatgg
tttctttccagtctaaatccattttgtcacaatgaaaaaatttggcatttactcaacatt
ggatgtgctctggctggtattttattccactacgaaaatgtttactttgaacaagacttt
cactttccgataataaatactacaaagtactcaatgtttatgtcaaaactttcagaaatt
atttttaagtcgttaaaaaaatcatttttgtacatatttttcatatttattcctttatat
gtgattgaaccaaaattatgtacagatttttatttttttgggaatctatggttttcaata
tcgctagtcttatatttgttttattcatttgaacatattatatttttaactatgactgaa
cgtattatatttccaattgtgactataaaacaaaatgataactgtttacttaatgcttta
aatgttgataataaaattataaaatcattagcactatatgatctttatcaagcaacaatt
aaagatgcagaaagaagaaaagaaatatttagccttagtttcgcaggaaatgttcctcaa
agttggaaaattatatttaactattgtataaataacataaaatctaccacagaagacttg
aaaaacgtagtcaaccatataccacttaagttaatcaatcggcgtaatataaccaatgct
agattaatacatattaatgataaagtcaatagcaaatcatcagaagaaaattcaaatcag
caaggaaaattattatgttttgttgaaaaattctggctgtataaatatttttttggacca
ttggacaaagataaattattagaagaattagaaacaacagtttggtgctgttatatactt
tcaaatttagctgtagtttcattaaaagaggatgagtatggtattgttagagaacaattg
ggacaaattgttagcactattttggacttgaaaaatcaattggatgtccaacaaaaaagt
tttaacaatcaaaaaaccaagaaaattgaatatttgaaaacacatgttaagacttgtgct
gttatgttagcattaaattttggtatgtatgccaatgatattggtttagatgaaactcag
ttgcatagttttaaaaaaataatagtattgttaaataattgttaa
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