Rhopalosiphum maidis (corn leaf aphid): 113557876
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Entry
113557876 CDS
T06065
Name
(RefSeq) syntaxin-16-like
KO
K08489
syntaxin 16
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
113557876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmd04131
]
113557876
Membrane trafficking [BR:
rmd04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
113557876
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Motif
Other DBs
NCBI-GeneID:
113557876
NCBI-ProteinID:
XP_026819219
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All DBs
Position
3:complement(28095070..28096394)
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AA seq
329 aa
AA seq
DB search
MTTRSFTNIYILMRKNCLQTIHSFKESAKHNDYDTNSKGCINDEVLLMEADRAIDMRSQE
ICPPPWTGLFEDAQCSIAWLQNKLEELRSLQDAHLLRPAALDDCNLQEKYIQDLTLEITR
IFASTKKTINQIQLHSNGIFANKESQLSYNVSSALMSSLQNVFNEFRNSQKVYRNKIKNL
EGISLQMLFETNDISSNSNSFSINEQCSSNAFRQQLQMLQSNQTRTFAAILIEEENAKMA
VQLEREGNRIASSIVELNNIFKDVAHMAVQQGNVLDRIDYNIEQTEIKVKQDAAKLIESE
DCYDRKIKCILILVTISFLFLILLEITAL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgactacaagaagtttcaccaacatatacatactgatgagaaaaaattgtttgcaaact
atccattcatttaaagaatctgctaagcataacgattatgatacaaatagcaaaggatgt
attaacgacgaagtgttgttaatggaggccgatcgagctattgacatgcgatctcaggaa
atatgtccacctccgtggaccggactgtttgaagatgctcaatgttctattgcctggtta
cagaataaattagaagaattgcgttcgttacaagatgcacatttgttgagacctgcagcc
ctcgatgattgtaacttgcaagagaaatacatccaagatcttacattagaaattactaga
atatttgcttcaaccaaaaaaacaatcaatcaaatacaattacactcgaatggaatattc
gccaacaaagaatcccaactttcttacaacgtgtcatccgctttaatgtcatcgttacaa
aacgttttcaacgaatttcgaaattcacaaaaagtctatcgcaacaaaatcaaaaattta
gaagggatatcgttacaaatgctattcgaaaccaacgacatcagttctaattctaattca
ttcagtattaacgaacaatgttcgtcgaatgcttttagacaacagttgcagatgttacag
tcgaatcaaacgcgaacattcgctgctatacttatcgaagaggaaaacgctaaaatggcc
gtacagttggaacgcgaaggaaatcggatagccagttctattgttgaactcaacaacata
tttaaagacgttgcacacatggccgttcaacaaggtaatgttttggatcggatagattac
aatattgagcagactgaaattaaagttaaacaggatgcagcgaagcttatagaatcggaa
gattgttatgatcgaaagattaaatgtattttgattttagttaccattagttttttgttt
ttaattctattagaaataacagcattataa
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