Rhopalosiphum maidis (corn leaf aphid): 113558086
Help
Entry
113558086 CDS
T06065
Name
(RefSeq) E3 ubiquitin-protein ligase sina-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04013
MAPK signaling pathway - fly
rmd04120
Ubiquitin mediated proteolysis
rmd04137
Mitophagy - animal
rmd04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113558086
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
113558086
04310 Wnt signaling pathway
113558086
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113558086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmd04121
]
113558086
Enzymes [BR:
rmd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113558086
Ubiquitin system [BR:
rmd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
113558086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
VCX_VCY
Motif
Other DBs
NCBI-GeneID:
113558086
NCBI-ProteinID:
XP_026819405
LinkDB
All DBs
Position
1:68248729..68260167
Genome browser
AA seq
495 aa
AA seq
DB search
MNDESEEDDTRSGLNLTFWRKDIVLRHVGYDHRPEHARSVRRSRKFADQPYVLINRSFPR
NTSSGVTRRTNRLVNVSSTNQGYNDHPPGRSQTPEQELPEVQVIENVMEPDNSDDQYDVY
RARGQEGILSVSSRNDADSGEDRGSSHEENRNSTLDIPNETPRTRVVPFIMSPTPFSPPS
ESPTDTSEILATGVNNDLPNVPAAIPLTTNNDDNHNTVSNNESRTSLVRVEEHPETYEDL
NGQLLRLFECPVCFEHIISPIYQCLHGHLICNKCIVMCENCPTCRNYFNTQRNLYMEKVG
NLLKFPCKNTSYGCKQQMFISLKENHEQECLCRQYQCFFTDCSWKGYYSELHSHMIKNHN
NYVLTGSEQFLDIVLNGENQTLKWFLSGESEYFAILIHVMESPRILKIQVNLIGPAVKAK
QFKFCVQLTQRKKRSGFSQKLVYESSTLSFSEIDDALNHSGLKQNLISLSEEMIEPFIRR
RTNCRLPVIFKVIPV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgaaagtgaagaagacgatactagaagcggtttaaaccttactttttggaga
aaagatattgtactaagacatgttggctatgatcatagaccagaacacgctagatctgta
agacggtcaaggaaatttgcagatcaaccttatgtattaataaaccggagctttccaaga
aatacttcctccggtgttacaagaagaaccaataggcttgttaatgtttcatcaacaaac
caaggttataatgatcatcctcctggtagatcacaaactccagaacaagaacttcctgaa
gtacaagtaatagaaaatgtaatggaacctgataacagtgatgaccaatatgatgtctat
cgtgctcgtggccaagaaggtattttaagtgtttcatctcgtaatgatgctgattctggc
gaagatagaggatcttcacatgaagaaaatagaaatagtactttagatatacctaatgaa
actccaagaacaagagttgtaccttttatcatgtcaccaacaccatttagtccaccgtcc
gaatctcctacagatacttctgaaattctagctacaggagtaaacaatgatttaccaaat
gtgcctgcagcaataccattaacaactaataatgatgataatcataatactgtttccaat
aatgaatccagaacatcactagtacgcgttgaagaacatccagaaacatatgaagacctt
aatggtcagttattacgtttatttgaatgtcctgtatgttttgaacacattatttctccc
atttatcaatgcttgcatggacatttaatttgtaataaatgtatagttatgtgtgaaaat
tgcccaacatgtagaaattatttcaacacacaacgcaatctatacatggaaaaagttggt
aatttgctaaagtttccctgtaaaaatacttcatatggatgcaagcagcaaatgtttatt
agtctaaaagaaaatcacgaacaagaatgtttgtgtagacaataccaatgttttttcact
gattgttcttggaaaggatactattctgaattgcactcgcatatgattaaaaatcataat
aactacgtcctaactggatcagaacagtttcttgatattgtgttgaatggtgaaaatcaa
acattaaagtggtttttatcaggagagagtgaatactttgcaatactcattcatgtaatg
gaatcgcctagaatattaaaaattcaagtaaatttgattggaccagcagttaaagcaaaa
caatttaaattttgtgtacagttaacccaacgtaaaaaacgcagtggattttcacaaaag
ttagtttatgagagttcaactctttcattttcggaaatcgatgatgcgttgaaccacagt
ggtctaaaacaaaacttaatttctttatctgaagaaatgatagaaccttttataagaaga
aggactaactgtcgtctaccagttatttttaaagttatcccagtataa
DBGET
integrated database retrieval system
