Rhopalosiphum maidis (corn leaf aphid): 113558142
Help
Entry
113558142 CDS
T06065
Name
(RefSeq) piwi-like protein Siwi
KO
K02156
aubergine
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
113558142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmd03036
]
113558142
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
113558142
piRNA pathway
113558142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
Piwi_N
Motif
Other DBs
NCBI-GeneID:
113558142
NCBI-ProteinID:
XP_026819450
LinkDB
All DBs
Position
3:54889074..54894616
Genome browser
AA seq
856 aa
AA seq
DB search
MENRARGRSRHCPQRPMPPQPQFQACTSQLRPPRPPIRGNSSLDTSLTHNQKTKVQQVTD
ELKKMYTDELELVKNEDNQSQLNKTEHKNKPRMQFDTIKQGTSGQPVKLLANYFPIITYT
NWCLYQYRVDYNPEEDRISTKRGLLAQHRERLGGYLFDGTMLFSGTRFDPPTFELASTCR
LDNKIVIITIKFTNVIETGDYANIQVFNLLLRNCLRHLKLTMIGRNFYDPDAKIDMAQHK
LQLWPGYETTIGRYEDNILLCAEISTKVMRQETVLDFFKQCAADRNRNKDWMINFKSGVI
GTTVMTKYNNKTYKIDDIDENSDPNSEFKKKDESKMTYIQYYKEKWNMKICGGKQPMLIS
KNKRSIRRFGVEDTLVYLVPELCIMTGITDAMRNNFTLMKDMSIHTRVNPKERIDRLTNF
ANRLLSTPDSVNELKRWNLTLSNKLVELTGRTLQPEAIQSRTVGYNGGIEADWTRHLRSL
PMFISATVKKWVILTPKDCCTEVYTFARNLAKAGQGMSFILPKPDICPMADGKSSTFLSE
LERVINELNPSLILCVIPSARGDIYSMIKRKLCIDRAVPSQVVLLKNVQKNNLSVCTKIA
IQINCKLGGAPWLVTIPKKGMMIIGFDVCHDSQRKNISFGALVCTMNDAHTSYFSCVEPH
ESGEELSVHFATGISKALSKYRNKNGTLPTSIVVYRDGVGEGQISHVYKTEVRLLQTACI
QFYGASSVPFAFVIVTKRISSRFFAPTIRGPENPRPGTVIDSVVTDPTKYDFFLVSQHVR
QGTVTPTHYQVIEDTLKLPPDIMQRLTFKLTHMYYNWSGTVRVPAPCQLAHKLAFLTGQS
LRRSPNIELDELLYFL
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacagagctcgaggcagaagtaggcattgtccacaacgaccaatgccaccacaa
cctcaatttcaagcatgtacatcgcagctaagacccccaagaccgccaatacgtggaaat
tcaagtcttgatacaagtcttactcataatcaaaagacaaaagtgcaacaagttacagat
gaacttaaaaaaatgtatacagatgaactagaactggtaaaaaatgaagacaaccaaagc
caattaaacaaaactgaacacaaaaataaaccaagaatgcaatttgataccataaaacaa
ggaacttctggacaaccggtaaaactgttagcaaattattttccaatcataacatacaca
aattggtgcttgtaccaatatcgagttgactacaatcccgaagaagatagaattagtacc
aaaagagggttgttagcacaacatagagaacgtttaggcggatatctatttgatggaaca
atgttattttctggaacgcgatttgatccaccaactttcgaacttgcatctacttgtcgc
ttggataataaaattgtaataattacaataaaattcacaaatgtaatagaaactggagat
tatgctaatattcaagttttcaacttgctcttgcgtaattgtttgaggcatcttaaacta
acaatgattggaaggaacttttatgatccagacgccaaaattgatatggctcagcacaaa
ctccaactttggccgggctatgaaacaaccattggcaggtatgaagataacattttatta
tgtgctgaaatatctactaaagtcatgcgtcaagagacagtattagatttttttaaacaa
tgtgctgctgatagaaaccgaaataaggattggatgataaactttaaaagtggtgttatt
ggtactacagtaatgactaaatacaacaacaaaacatacaaaattgatgatatagatgaa
aattctgatcctaattctgaatttaaaaaaaaagatgaatctaaaatgacttacatacaa
tattacaaagaaaaatggaacatgaaaatttgtggtggcaagcagccaatgttgatttcc
aaaaataagagatcgatacgcaggtttggagttgaagatacactggtttatctagttcca
gaattatgcattatgactggtataacagatgcgatgagaaacaatttcacgcttatgaaa
gatatgtccatacatactcgtgtgaatcccaaagaacgcatagacagattgacaaatttt
gctaatcgtcttctttctacacctgactctgttaacgaattaaaaagatggaatcttaca
ttaagtaacaagttagttgaacttactggtcgtacattacaaccagaagcaattcagagt
cgaactgtaggatataacggtggtatagaagctgattggacaagacacttacgctcatta
cctatgttcatttctgctactgtaaaaaaatgggttattttaactcctaaggactgctgt
actgaagtttatacttttgctagaaatcttgcaaaggcaggacaagggatgtcatttata
ttacctaagcctgatatatgtcctatggctgatggaaaatcaagtacatttttgagcgaa
ctagaaagagtaattaatgaattgaatccatcattgattttatgtgttattccatcggca
cgtggtgatatttatagtatgattaaacgaaaattatgtatagatagagcagtaccctca
caagtagtactattgaaaaatgtgcaaaaaaacaatttgtcagtttgcacaaaaattgcc
attcaaataaattgtaagcttggtggtgctccttggctagttaccattcccaaaaaaggt
atgatgattattggttttgatgtgtgtcatgacagtcaacggaaaaatatatcatttgga
gccttagtatgtacaatgaatgatgctcacacaagttatttcagttgtgtggagcctcat
gaaagtggagaagaactatctgttcattttgctactggcataagtaaagcattgtccaaa
taccgaaataaaaatggcacattacctacctctattgttgtatatagagatggtgttgga
gaaggtcaaatatctcatgtctataaaactgaagttaggcttttgcaaactgcttgtata
caattttatggtgcaagttctgtcccctttgcttttgttatagtaacaaaacgcataagt
tcaaggttttttgcccctactataagagggcctgaaaatcctcgacctggtacagttatt
gatagtgttgtaacagaccctaccaagtatgattttttcttagtttctcaacacgtaaga
cagggtactgtaactcctacacattatcaagtgattgaagatacgcttaaacttcctccc
gatataatgcaaagacttacattcaagttgacccatatgtactacaattggtcgggtact
gtacgagttcctgctccatgtcagctggctcacaagttggctttcctcactggtcaaagt
ctcagacgttctcccaacattgaattggacgaattattatacttcttatag
DBGET
integrated database retrieval system