Rhopalosiphum maidis (corn leaf aphid): 113558248
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Entry
113558248 CDS
T06065
Name
(RefSeq) uncharacterized protein LOC113558248
KO
K26457
neuronal PAS domain-containing protein 4
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmd03000
]
113558248
Transcription factors [BR:
rmd03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113558248
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_NPAS4
PAS_3
PAS
HLH
Spore_coat_CotO
DUF6957
Motif
Other DBs
NCBI-GeneID:
113558248
NCBI-ProteinID:
XP_026819530
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All DBs
Position
1:17468068..17588124
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AA seq
738 aa
AA seq
DB search
MFTRFDATKSTKGASKLRRDLINAEIANLRDLLPLPPSTRQRLSQLQLMALVCVYVRKAN
YFQQAFKRHECLHHHCLPTPSYGFSKSLSGFLMMMTQNGKLLYISDNAAEYLGHSMEDLL
IHGDSVYDMIDKQDHQAVQTELSRSQTSAEDQGCKRMFLCRMNVSRNARRQMRFGDQKVV
LVQGHYLSYLPLCSRNEPVFLATCSPVAMPETREAVVQGSTTVFTAIHSMDMKFIHVDKI
GEFHLGFSRSELQGVSWYQLLHWECMREAQSKHRLITQSEQDRSCILLARVQKRATGDWL
WIHCVLQVKDNMENSQQPVIVSTNQVLTDQEAAVMRANSWLYHYYMVQSKLQYGMQFEAQ
TSPRVPSTGPAQVQTGVPPPTAAPVYAYHHQQSPHQQDGAYPSADHQHHQQHHQQQHQQQ
HQQHHQQQQPVHFHQLPDGYFRYAAAAATSTGTAAVTTAAATTTTAVASKRHRLEPEPVD
YSIHSPEQTPPLKVEDGGHSMVSDPSPSPPSMGGGDSGGGCATAVAAALSSSLPSATSLG
RSRALVKAAMDPGDLMMETWNPSPPWSDCCSGTGALQKVPDVDMLGSSGGGSYCGQPTPP
TPGSGGSYHTSSGAPQQHHNHQHHPGGCDEVPTADTLHQHHHHHHHHHQPSTFTFDWPGE
QYVPNVHEVLVEPTPHYIVPFPPWPHTAAADHHRLFPLQPPPPGSMNRPSLIVRVDQDAA
AAAAADASVQDGRRESDM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccaggttcgacgcgaccaagtccactaaaggagcgagcaagcttcggagggat
ctcatcaatgcagagatcgctaacctccgggacctactaccattgccgccgtccacgagg
caacggttgtcgcagttgcaacttatggccctggtgtgtgtgtacgtccggaaagccaac
tactttcaacaagcgttcaaacgtcatgaatgtctacaccaccattgcttgccaacgcct
agttacggattttctaagtcgctcagcgggttcttgatgatgatgacccaaaacggcaaa
ctcctatacatatcggataacgccgccgaatatttgggacactcgatggaggatctcctc
atacacggcgacagtgtgtacgacatgatcgataaacaagatcatcaggctgttcaaacc
gaactatccaggagtcaaacgtccgccgaggaccaaggatgtaagcgcatgttcttgtgc
cggatgaacgtttccaggaacgcccggaggcaaatgcgattcggcgatcaaaaagtggtt
ttggtgcagggccactacctctcctatctgccgctgtgcagcagaaatgaaccagttttc
ctagccacttgcagcccagtggcgatgcccgagaccagggaggctgtagtccagggctcc
accacagtgttcacagccatccattcgatggacatgaagttcatacacgtagacaaaata
ggagaatttcatttggggttttctcgttcagaactgcagggcgtctcttggtatcaattg
ttgcattgggagtgcatgcgcgaggctcagagcaaacacaggctgattacacaatcagaa
caggatcgttcttgcatactgctggccagggtacagaagagggccacaggggactggctt
tggatacactgtgtgttacaggtcaaagacaacatggaaaacagccaacagccagtcatc
gtcagcacaaatcaagtacttacggaccaagaggcggccgtgatgcgggccaacagttgg
ctgtaccattattacatggtgcagagcaaacttcagtacggtatgcagttcgaagcgcag
acgtcgccgcgagtgccgtccaccgggccggcacaggtgcagacgggcgtgcccccgcca
acggcggcacccgtgtacgcttatcaccaccaacagtcgccgcaccagcaggacggtgct
tacccgtcggcggaccaccagcaccaccaacagcaccatcaacagcaacaccaacagcaa
caccagcagcaccaccagcagcaacaaccggtgcacttccaccagttacccgacggatac
ttccggtacgccgcggcggccgcaacgtcgaccgggacggcggcggtgaccacggctgcg
gcgacaacgaccactgcggtggcgtcgaaacggcacaggttggaacccgaacccgttgac
tattccatacattcgcccgagcagacgccgccgttgaaggtcgaggacggcggccactcg
atggtgtccgacccgtcgccgtcgccgccttcgatgggcggcggcgattccggcggcggg
tgcgctaccgcggtggcggccgctctctcgtcgtccctgccgtcggccacgtcgctgggc
cggtctcgggcgctggtcaaggcggccatggaccccggcgacctgatgatggaaacgtgg
aatcccagtccaccgtggtcggactgctgttccgggaccggcgccctgcaaaaggtgccc
gacgtggacatgctcggcagcagcggcggtggcagttactgcggacagccgacgcccccc
acgcccggtagcggtggctcgtaccacacgtcgtcgggcgcaccacagcaacaccacaac
catcaacaccacccggggggctgcgatgaggtgcccaccgccgacacgctacaccaacac
caccaccatcatcaccaccatcaccaaccgtccacgttcacgttcgactggccgggcgag
cagtacgtgcccaacgtgcacgaggtgctcgtcgagcccacgccgcactatatagttccg
ttcccgccgtggccgcacaccgccgcggccgaccaccacaggctgttcccgctccaacca
ccaccgcccggctctatgaaccgaccgtcgctcatcgtacgggtcgaccaagacgccgcc
gctgccgccgccgccgacgcttccgtccaagacggacgtcgtgaaagcgacatgtga
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