Rhopalosiphum maidis (corn leaf aphid): 113558407
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Entry
113558407 CDS
T06065
Name
(RefSeq) probable serine/threonine-protein kinase DDB_G0282963
KO
K14323
protein CASC3
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03013
Nucleocytoplasmic transport
rmd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113558407
03015 mRNA surveillance pathway
113558407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113558407
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113558407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
113558407
NCBI-ProteinID:
XP_026819656
LinkDB
All DBs
Position
3:complement(25435652..25441754)
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AA seq
955 aa
AA seq
DB search
MESAAVTTKGEDTAPVVADATDNTTTTIATDALNPIAVTNEIDPSIKSDKEMIMTTNDVE
HVAVVSDLAVVSNESTITTVKATSENSKVEEDQLNTAMASTTISTDKVDEIKQNQDETAL
DEQQKPVTATVEKEIVINENSDANLDISIKSKSEYDEIINSTIGSGFEDAVEYMNNDEED
SVVKEQPRDVIQQENVPDNETSSQQEVEGGDGEENSSEENKDPSAPAEPVVPVPVDDDTN
DPQYIPRRGRFYEHDDRMAYSTTSSEGSESDNGYEEDSGDDDGVVSDRRRIRRRHTGIKK
PKSVIPVDTAENTALAAGDGTSSTKKVLAISKVAATAKDSETSVTAGGSAKKPSVGSRKS
RDLDALDKWTHDLYDENEQTRKSRDELLASYGYDIREESEAPRARRHHKYGRAATTKYTR
NWQDTKAYIGTAGGQQSMKVKRGGMARRSVGGPNKNIKKSTADDYTSEFPALDNSKKSEP
NSSTVSSTDVEVSVQNHEQQPKTPVQNEEKKTNVGAVETGQARHHTSSRAISKSNTTSPA
NRNNRQDQLNGGPSSSSSTNNKNYFNRSSTESPISKEKGAQVNRDSPTAPNSNFFNRRPQ
QSSSSHNQHQNFKQQHFNNSQGHNQQHQHSSSPRGRNFHQHHTSHQYNRDRYFSKGSIPS
SSSSTNQHNYDQQHNSVAPTTAGTGRTQHSGGHYQHYNNRQYENENQQIEPPAPPTPVVR
SSKRYSVQSRRELPDPVLNFGGLSKTPQPQPPASQQQNGLVMQDQQIQPASQQLQQQQPI
QIHQQPPPPLQIQQYHQPLQPIHHGMVLDHNTGMMVMAAADPSMYHHQMYATPQYATGVA
PGPATGSADDPNAAAAAAAAAALQMLAAQAAVYQPVPTGATGVTSPPPGTQSLQQPETFM
TTYYQPQQQPQQQPPPRRVNLAIPIVAPPPEPNQQQGNSKTNVSTTPPPTAASTN
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgctgccgtaaccacaaaaggagaagacactgcccccgtcgttgctgacgct
accgacaataccactaccacaatcgctaccgatgcgttaaatccgatagcagtgactaat
gaaattgatccatctattaagtcagacaaggaaatgattatgacaactaacgatgttgaa
catgtggcggtggtcagtgatctagctgttgtgtcaaatgaatctacaattactactgtt
aaagccactagtgaaaattccaaagttgaagaagatcaattaaatacagctatggcatct
acaacaatatcaactgataaggtagatgagattaaacagaatcaagatgaaacagctttg
gacgagcaacagaaacccgtgacagctacggttgaaaaagaaattgtaatcaatgaaaac
tcggatgcaaatctagatatctcaataaaatcaaaatcagagtatgatgaaataattaac
tcaacaattggtagtggatttgaagatgctgttgagtatatgaataatgatgaagaagat
agtgttgtaaaagaacagcctcgagatgtaattcaacaagaaaatgttcccgataatgag
accagttcacaacaagaagtagagggaggtgacggtgaagaaaactctagtgaagaaaac
aaagatccttcagcacctgcagaacctgtagtacctgtgcctgtggatgatgatactaat
gatccacaatacatacccagacgtggaagattctatgaacatgatgaccgtatggcttat
agtacaacaagctctgaaggatcagaatcagataatggatatgaagaagattcaggagac
gatgatggagttgtttctgatcgtcgccgtattagaagacgacataccggcattaaaaaa
ccaaaatcagtgatcccagtagatacagctgaaaatactgctttagctgctggagatgga
acatcgtctactaaaaaagtcttggctatatctaaggttgctgctacagcaaaagactct
gaaacttctgtaactgctggtggatcggcaaaaaaacctagtgtaggttctagaaaatcc
cgtgatttagatgctttggataaatggacacacgatttgtatgatgaaaacgaacagaca
cgtaaaagccgtgatgaattactggcctcatatggatatgacataagggaagaatcagag
gcacctcgagctcgacgtcaccataaatatgggcgagctgccactaccaaatatactcgt
aattggcaagatacaaaagcttacattggtactgctggtgggcagcagtctatgaaagta
aagcgtgggggtatggctcgacgcagtgttggcggtccaaataagaatataaagaaatct
acagctgatgattatacctctgaattccctgctttggataattcaaagaaatctgagcct
aattcttcaactgtgtcttccacagatgtagaagtttcagtccagaatcacgaacaacaa
ccaaaaactcctgttcagaatgaagaaaaaaagacaaatgttggagctgtggaaactggc
caagctcgacatcacacttcatcccgagcaatctcaaaatctaatacaacttctcctgca
aatcgaaacaatcgtcaagatcagctaaatggtgggccttcttcatcttcatcaactaat
aataaaaactatttcaatcggtcttcaactgagtctccaattagtaaagaaaaaggtgct
caagtaaatcgagactctcctacagcacctaattcaaacttttttaatcgaagaccacaa
caaagtagtagtagccataatcaacatcaaaattttaagcaacaacactttaataacagt
caaggacataaccagcaacaccaacattcttcgtcacctagaggccgtaatttccatcaa
catcatacttcgcatcaatataatcgtgataggtacttttctaagggttctattccttca
tcttcatccagtacaaatcaacacaactacgatcagcaacataattctgtagcacctact
actgctggcacagggcgcacacaacatagtggtggacattatcaacattacaataatcgt
caatatgaaaatgaaaatcaacaaattgagccacctgcaccaccaacaccagttgtacgt
agctccaaacgctactcagttcaaagccgcagggagcttcctgaccctgtcctgaatttt
ggtggattatctaaaacacctcagccacagcctccagcttctcagcaacaaaatgggtta
gtgatgcaagaccaacaaattcaacctgcgtctcaacaattacaacagcaacaaccaatc
caaattcatcaacaaccaccaccaccattgcaaatacagcagtatcaccaacccttacaa
ccaatacatcatggcatggtacttgatcacaacactggtatgatggttatggctgctgct
gatccatccatgtaccatcatcaaatgtatgctacaccccagtatgcaactggagtagca
ccaggtccagcaactggtagtgctgatgacccaaatgcagcagcagcagcagctgctgca
gctgctcttcagatgcttgcagctcaagcagctgtttaccaaccagtaccaacaggtgcg
acaggtgtaacatcgccaccacctggaactcaatctttgcaacaaccagaaaccttcatg
actacttattatcaaccacaacaacagccacaacaacaacctcccccaagacgtgtcaat
ctggctatacccattgtggcaccgcctccagaacctaatcaacagcaagggaattcaaaa
accaatgtatctactacaccgccacctactgcagcttcaaccaactga
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